Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases SARS-COV-2
Drug Drug
Main interacting RNAs N.A.
Moonlighting functions Metabolic enzyme
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000206172 Gene ID 3039 Accession 4823
Symbol HBA1 Alias HBH;ECYT7;HBA-T3;METHBA Full Name hemoglobin subunit alpha 1
Status Confidence Length 843 bases Strand Plus strand
Position 16 : 176680 - 177522 RNA binding domain N.A.
Summary The human alpha globin gene cluster located on chromosome 16 spans about 30 kb and includes seven loci: 5'- zeta - pseudozeta - mu - pseudoalpha-1 - alpha-2 - alpha-1 - theta - 3'. The alpha-2 (HBA2) and alpha-1 (HBA1) coding sequences are identical. These genes differ slightly over the 5' untranslated regions and the introns, but they differ significantly over the 3' untranslated regions. Two alpha chains plus two beta chains constitute HbA, which in normal adult life comprises about 97% of the total hemoglobin; alpha chains combine with delta chains to constitute HbA-2, which with HbF (fetal hemoglobin) makes up the remaining 3% of adult hemoglobin. Alpha thalassemias result from deletions of each of the alpha genes as well as deletions of both HBA2 and HBA1; some nondeletion alpha thalassemias have also been reported. [provided by RefSeq, Jul 2008]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
HBA1-201 ENST00000320868 577 142aa ENSP00000322421
HBA1-203 ENST00000472694 674 No protein -
HBA1-202 ENST00000397797 504 110aa ENSP00000380899
HBA1-204 ENST00000487791 410 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
76598Erythrocyte Indices3E-920139978
76599Hemoglobins3E-920139978

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0004601contributes_to peroxidase activity2IBA,IDAHomo_sapiens(9606)Function
GO:0005344enables oxygen carrier activity1IBAHomo_sapiens(9606)Function
GO:0005506enables iron ion binding1IEAHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005576located_in extracellular region1TASHomo_sapiens(9606)Component
GO:0005615located_in extracellular space1IDAHomo_sapiens(9606)Component
GO:0005829located_in cytosol1TASHomo_sapiens(9606)Component
GO:0005833part_of hemoglobin complex4IBA,IDA,IPI,TASHomo_sapiens(9606)Component
GO:0015670involved_in carbon dioxide transport1NASHomo_sapiens(9606)Process
GO:0015671involved_in oxygen transport4IDA,IMP,NAS,TASHomo_sapiens(9606)Process
GO:0016020located_in membrane1HDAHomo_sapiens(9606)Component
GO:0019825enables oxygen binding1IBAHomo_sapiens(9606)Function
GO:0020037enables heme binding1IBAHomo_sapiens(9606)Function
GO:0030185involved_in nitric oxide transport1IDAHomo_sapiens(9606)Process
GO:0031720contributes_to haptoglobin binding2IBA,IDAHomo_sapiens(9606)Function
GO:0031838part_of haptoglobin-hemoglobin complex2IBA,IDAHomo_sapiens(9606)Component
GO:0042542involved_in response to hydrogen peroxide1IDAHomo_sapiens(9606)Process
GO:0042744involved_in hydrogen peroxide catabolic process2IBA,IDAHomo_sapiens(9606)Process
GO:0043177enables organic acid binding1IBAHomo_sapiens(9606)Function
GO:0070062located_in extracellular exosome1HDAHomo_sapiens(9606)Component
GO:0071682located_in endocytic vesicle lumen1TASHomo_sapiens(9606)Component
GO:0072562located_in blood microparticle1HDAHomo_sapiens(9606)Component
GO:0098869involved_in cellular oxidant detoxification1IEAHomo_sapiens(9606)Process

Expression