Functions and Diseases

RBP Type Canonical_RBPs
Diseases Cancer
Drug N.A.
Main interacting RNAs mRNA
Moonlighting functions N.A.
Localizations Stress granucleNucleoli
BulkPerturb-seq DataSet_01_326 DataSet_01_328

Description

Ensembl ID ENSG00000163950 Gene ID 7884 Accession 10904
Symbol SLBP Alias HBP Full Name stem-loop histone mRNA binding protein
Status Confidence Length 19614 bases Strand Minus strand
Position 4 : 1692731 - 1712344 RNA binding domain SLBP_RNA_bind
Summary This gene encodes a protein that binds to the stem-loop structure in replication-dependent histone mRNAs. Histone mRNAs do not contain introns or polyadenylation signals, and are processed by endonucleolytic cleavage. The stem-loop structure is essential for efficient processing but this structure also controls the transport, translation and stability of histone mRNAs. Expression of the protein is regulated during the cell cycle, increasing more than 10-fold during the latter part of G1. [provided by RefSeq, Jul 2008]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000418658 SLBP_RNA_bind PF15247 2.7e-29 1
ENSP00000426891 SLBP_RNA_bind PF15247 2.7e-29 1
ENSP00000406322 SLBP_RNA_bind PF15247 5.5e-29 1
ENSP00000417686 SLBP_RNA_bind PF15247 7.4e-29 1
ENSP00000316490 SLBP_RNA_bind PF15247 7.8e-29 1
ENSP00000417359 SLBP_RNA_bind PF15247 4.6e-16 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal
26377992 A multiprotein occupancy map of the mRNP on the 3' end of histone mRNAs. Lionel Brooks 2015-11-01 RNA (New York, N.Y.)
32266261 Pinning Down the Transcription: A Role for Peptidyl-Prolyl cis-trans Isomerase Pin1 in Gene Expression. Xiangming Hu 2020-01-01 Frontiers in cell and developmental biology
25379382 Contribution of protein phosphorylation to binding-induced folding of the SLBP-histone mRNA complex probed by phosphorus-31 NMR. Roopa Thapar 2014-01-01 FEBS open bio
22907757 The prolyl isomerase Pin1 targets stem-loop binding protein (SLBP) to dissociate the SLBP-histone mRNA complex linking histone mRNA decay with SLBP ubiquitination. Nithya Krishnan 2012-11-01 Molecular and cellular biology
31162604 Discovering sequence and structure landscapes in RNA interaction motifs. Marta Adinolfi 2019-06-04 Nucleic acids research
25934501 The end of the message: multiple protein-RNA interactions define the mRNA polyadenylation site. Yongsheng Shi 2015-05-01 Genes & development
34416372 Stem-loop binding protein and metal carcinogenesis. R Beatrix Bradford 2021-11-01 Seminars in cancer biology
29104761 Fiat Lux: illuminating the cell cycle. Gianmaria Liccardi 2017-01-01 Cell death discovery
36018788 PRIESSTESS: interpretable, high-performing models of the sequence and structure preferences of RNA-binding proteins. U Kaitlin Laverty 2022-10-28 Nucleic acids research
35013239 Proximity labeling identifies a repertoire of site-specific R-loop modulators. Qingqing Yan 2022-01-10 Nature communications
15546920 The human histone gene expression regulator HBP/SLBP is required for histone and DNA synthesis, cell cycle progression and cell proliferation in mitotic cells. Xiujie Zhao 2004-12-01 Journal of cell science
27798610 Fluorescent indicators for simultaneous reporting of all four cell cycle phases. T Bryce Bajar 2016-12-01 Nature methods
35037047 53BP1-ACLY-SLBP-coordinated activation of replication-dependent histone biogenesis maintains genomic integrity. TingTing Wu 2022-02-22 Nucleic acids research
31230714 Programmable RNA-Guided RNA Effector Proteins Built from Human Parts. Simone Rauch 2019-06-27 Cell
29357066 The Temporal Regulation of S Phase Proteins During G1. D Gavin Grant 2017-01-01 Advances in experimental medicine and biology
18927579 Metabolism and regulation of canonical histone mRNAs: life without a poly(A) tail. F William Marzluff 2008-11-01 Nature reviews. Genetics
36835083 Basic Methods of Cell Cycle Analysis. Anna Ligasová 2023-02-12 International journal of molecular sciences
23329046 Structure of histone mRNA stem-loop, human stem-loop binding protein, and 3'hExo ternary complex. Dazhi Tan 2013-01-18 Science (New York, N.Y.)
37516934 Uridylation of the histone mRNA stem-loop weakens binding interactions with SLBP while maintaining interactions with 3'hExo. Morgan Shine 2023-01-01 RNA biology
23941746 Replication stress-induced alternative mRNA splicing alters properties of the histone RNA-binding protein HBP/SLBP: a key factor in the control of histone gene expression. J M Alexander Rattray 2013-09-06 Bioscience reports
28289156 U7 snRNP is recruited to histone pre-mRNA in a FLASH-dependent manner by two separate regions of the stem-loop binding protein. Aleksandra Skrajna 2017-06-01 RNA (New York, N.Y.)
23286197 Assembly of the SLIP1-SLBP complex on histone mRNA requires heterodimerization and sequential binding of SLBP followed by SLIP1. Nitin Bansal 2013-01-22 Biochemistry
23142872 Systematic reconstruction of RNA functional motifs with high-throughput microfluidics. Lance Martin 2012-12-01 Nature methods

Transcripts

Name Transcript ID bp Protein Translation ID
SLBP-206 ENST00000489418 1810 270aa ENSP00000417686
SLBP-202 ENST00000429429 1623 231aa ENSP00000406322
SLBP-201 ENST00000318386 1635 277aa ENSP00000316490
SLBP-204 ENST00000483348 1030 225aa ENSP00000426891
SLBP-205 ENST00000488267 987 235aa ENSP00000418658
SLBP-203 ENST00000480936 558 186aa ENSP00000417359

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
70714Hip6E-1025673412
70715Body Mass Index6E-1025673412
75904Body Height2E-1120881960
92275Cartilage1E-627701424
104601Hip8E-725673412
104602Body Mass Index8E-725673412

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000163950

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000163950homo_sapiensENSP00000417686100100nomascus_leucogenysENSNLEP0000000006197.472997.4729
ENSG00000163950homo_sapiensENSP0000041768699.259399.2593pan_paniscusENSPPAP0000002019499.259399.2593
ENSG00000163950homo_sapiensENSP0000041768694.814894.8148pongo_abeliiENSPPYP0000003539765.979465.9794
ENSG00000163950homo_sapiensENSP0000041768693.703793.7037pan_troglodytesENSPTRP0000008868593.014793.0147
ENSG00000163950homo_sapiensENSP00000417686100100gorilla_gorillaENSGGOP00000003115100100
ENSG00000163950homo_sapiensENSP0000041768683.703777.4074ornithorhynchus_anatinusENSOANP0000002244962.430957.7348
ENSG00000163950homo_sapiensENSP0000041768686.666779.2593sarcophilus_harrisiiENSSHAP0000004443369.850763.8806
ENSG00000163950homo_sapiensENSP000004176866056.6667notamacropus_eugeniiENSMEUP0000000228991.011285.9551
ENSG00000163950homo_sapiensENSP0000041768686.666781.1111dasypus_novemcinctusENSDNOP0000003021084.172778.777
ENSG00000163950homo_sapiensENSP0000041768674.074168.8889echinops_telfairiENSETEP0000000379085.470179.4872
ENSG00000163950homo_sapiensENSP0000041768685.185280.3704callithrix_jacchusENSCJAP0000008335156.930753.7129
ENSG00000163950homo_sapiensENSP0000041768698.148197.4074cercocebus_atysENSCATP0000000988894.982194.2652
ENSG00000163950homo_sapiensENSP0000041768610099.2593macaca_fascicularisENSMFAP0000005484097.472996.7509
ENSG00000163950homo_sapiensENSP0000041768610099.2593macaca_mulattaENSMMUP0000005976877.363976.7908
ENSG00000163950homo_sapiensENSP0000041768681.481580.7407macaca_nemestrinaENSMNEP0000000179396.916396.0352
ENSG00000163950homo_sapiensENSP0000041768687.03786.2963papio_anubisENSPANP0000003578474.367173.7342
ENSG00000163950homo_sapiensENSP0000041768681.481580mandrillus_leucophaeusENSMLEP0000000568385.603184.0467
ENSG00000163950homo_sapiensENSP0000041768674.814872.2222tursiops_truncatusENSTTRP0000001032893.518590.2778
ENSG00000163950homo_sapiensENSP0000041768660.370457.4074tursiops_truncatusENSTTRP0000000376092.090487.5706
ENSG00000163950homo_sapiensENSP0000041768689.629684.8148vulpes_vulpesENSVVUP0000002117644.403742.0183
ENSG00000163950homo_sapiensENSP0000041768681.851977.4074mus_spretusMGP_SPRETEiJ_P007017488.483.6
ENSG00000163950homo_sapiensENSP0000041768685.555681.8519equus_asinusENSEASP0000505265275.986872.6974
ENSG00000163950homo_sapiensENSP0000041768690.740785.9259capra_hircusENSCHIP0000002085589.090984.3636
ENSG00000163950homo_sapiensENSP0000041768676.296372.5926loxodonta_africanaENSLAFP0000001081485.12480.9917
ENSG00000163950homo_sapiensENSP0000041768691.851989.2593panthera_leoENSPLOP0000000654388.571486.0714
ENSG00000163950homo_sapiensENSP0000041768685.185281.1111ailuropoda_melanoleucaENSAMEP0000004369732.303430.7584
ENSG00000163950homo_sapiensENSP0000041768686.296378.8889bos_indicus_hybridENSBIXP0000500217352.834548.2993
ENSG00000163950homo_sapiensENSP0000041768693.703790equus_caballusENSECAP0000000961190.68187.0968
ENSG00000163950homo_sapiensENSP0000041768691.851988.1481canis_lupus_familiarisENSCAFP0084500027987.943384.3972
ENSG00000163950homo_sapiensENSP0000041768683.333380.7407panthera_pardusENSPPRP0000002623886.206983.5249
ENSG00000163950homo_sapiensENSP0000041768667.03765.5556marmota_marmota_marmotaENSMMMP0000001035494.270892.1875
ENSG00000163950homo_sapiensENSP0000041768691.851988.1481balaenoptera_musculusENSBMSP0001001384188.888985.3047
ENSG00000163950homo_sapiensENSP0000041768687.03784.0741cavia_porcellusENSCPOP0000000002785.454582.5455
ENSG00000163950homo_sapiensENSP0000041768682.222278.5185felis_catusENSFCAP0000005285568.098265.0307
ENSG00000163950homo_sapiensENSP0000041768691.851988.1481ursus_americanusENSUAMP0000001630889.530785.9206
ENSG00000163950homo_sapiensENSP0000041768685.925978.5185monodelphis_domesticaENSMODP0000000529881.403574.386
ENSG00000163950homo_sapiensENSP000004176868075.5556bison_bison_bisonENSBBBP0000002740891.525486.4407
ENSG00000163950homo_sapiensENSP0000041768691.481587.4074monodon_monocerosENSMMNP0001501200288.530584.5878
ENSG00000163950homo_sapiensENSP0000041768690.370484.0741sus_scrofaENSSSCP0000000924988.727382.5455
ENSG00000163950homo_sapiensENSP0000041768695.185292.963microcebus_murinusENSMICP0000004527795.185292.963
ENSG00000163950homo_sapiensENSP0000041768687.777884.8148octodon_degusENSODEP0000001715689.772786.7424
ENSG00000163950homo_sapiensENSP0000041768691.111187.037jaculus_jaculusENSJJAP0000000173290.441286.3971
ENSG00000163950homo_sapiensENSP0000041768692.592688.1481jaculus_jaculusENSJJAP0000001965390.909186.5455
ENSG00000163950homo_sapiensENSP0000041768690.740786.2963ovis_aries_rambouilletENSOARP0002003096589.090984.7273
ENSG00000163950homo_sapiensENSP0000041768667.407465.1852ursus_maritimusENSUMAP0000000796794.791791.6667
ENSG00000163950homo_sapiensENSP0000041768677.03772.5926delphinapterus_leucasENSDLEP0000002299360.115656.6474
ENSG00000163950homo_sapiensENSP0000041768681.111179.2593physeter_catodonENSPCTP0000501013592.796690.678
ENSG00000163950homo_sapiensENSP0000041768692.96388.5185mus_caroliMGP_CAROLIEiJ_P006754891.272786.9091
ENSG00000163950homo_sapiensENSP0000041768693.333388.8889mus_musculusENSMUSP0000006293091.636487.2727
ENSG00000163950homo_sapiensENSP0000041768675.185271.8519dipodomys_ordiiENSDORP0000002326093.981589.8148
ENSG00000163950homo_sapiensENSP0000041768664.814862.2222mustela_putorius_furoENSMPUP0000001104889.743686.1538
ENSG00000163950homo_sapiensENSP0000041768697.407496.2963aotus_nancymaaeENSANAP0000003430994.945893.8628
ENSG00000163950homo_sapiensENSP0000041768668.518567.037saimiri_boliviensis_boliviensisENSSBOP0000003548398.930596.7914
ENSG00000163950homo_sapiensENSP0000041768687.777884.8148chlorocebus_sabaeusENSCSAP0000001169086.181883.2727
ENSG00000163950homo_sapiensENSP0000041768662.96361.1111tupaia_belangeriENSTBEP0000000353967.460365.4762
ENSG00000163950homo_sapiensENSP0000041768694.074188.5185mesocricetus_auratusENSMAUP0000000795592.363686.9091
ENSG00000163950homo_sapiensENSP0000041768690.740786.6667phocoena_sinusENSPSNP0000002634373.134369.8507
ENSG00000163950homo_sapiensENSP0000041768678.518575.9259camelus_dromedariusENSCDRP0000500747588.702985.7741
ENSG00000163950homo_sapiensENSP0000041768694.814892.963carlito_syrichtaENSTSYP0000001747794.814892.963
ENSG00000163950homo_sapiensENSP0000041768666.296364.8148panthera_tigris_altaicaENSPTIP0000001620093.229291.1458
ENSG00000163950homo_sapiensENSP0000041768693.703788.5185rattus_norvegicusENSRNOP000000477999286.9091
ENSG00000163950homo_sapiensENSP0000041768660.370452.5926rattus_norvegicusENSRNOP0000007682267.355458.6777
ENSG00000163950homo_sapiensENSP0000041768694.814892.5926prolemur_simusENSPSMP0000000279692.418890.2527
ENSG00000163950homo_sapiensENSP0000041768693.703787.4074microtus_ochrogasterENSMOCP000000171279285.8182
ENSG00000163950homo_sapiensENSP0000041768694.444488.5185peromyscus_maniculatus_bairdiiENSPEMP0000002038992.727386.9091
ENSG00000163950homo_sapiensENSP0000041768676.296372.5926bos_mutusENSBMUP0000002867084.773780.6584
ENSG00000163950homo_sapiensENSP0000041768693.333388.8889mus_spicilegusENSMSIP0000002412591.636487.2727
ENSG00000163950homo_sapiensENSP0000041768694.074188.1481cricetulus_griseus_chok1gshdENSCGRP0000100735192.363686.5455
ENSG00000163950homo_sapiensENSP0000041768691.481585.1852cricetulus_griseus_chok1gshdENSCGRP0000101131491.821685.5019
ENSG00000163950homo_sapiensENSP0000041768686.666781.1111pteropus_vampyrusENSPVAP0000000265289.655283.908
ENSG00000163950homo_sapiensENSP0000041768673.703770myotis_lucifugusENSMLUP0000000402685.407781.1159
ENSG00000163950homo_sapiensENSP0000041768687.03777.7778vombatus_ursinusENSVURP0001002776479.93271.4286
ENSG00000163950homo_sapiensENSP0000041768688.518584.0741rhinolophus_ferrumequinumENSRFEP0001001663455.069152.3041
ENSG00000163950homo_sapiensENSP0000041768692.222288.8889neovison_visonENSNVIP0000002911489.247386.0215
ENSG00000163950homo_sapiensENSP0000041768689.629684.8148bos_taurusENSBTAP0000006252060.557.25
ENSG00000163950homo_sapiensENSP000004176868075.5556heterocephalus_glaber_femaleENSHGLP0000004052478.260973.913
ENSG00000163950homo_sapiensENSP0000041768698.148197.4074rhinopithecus_bietiENSRBIP0000003062294.982194.2652
ENSG00000163950homo_sapiensENSP0000041768691.851988.1481canis_lupus_dingoENSCAFP0002001535090.181886.5455
ENSG00000163950homo_sapiensENSP0000041768692.592688.5185sciurus_vulgarisENSSVLP0000501395890.909186.9091
ENSG00000163950homo_sapiensENSP0000041768687.03779.2593phascolarctos_cinereusENSPCIP0000001778879.66172.5424
ENSG00000163950homo_sapiensENSP0000041768691.111186.6667nannospalax_galiliENSNGAP0000002169389.454585.0909
ENSG00000163950homo_sapiensENSP000004176869085.1852bos_grunniensENSBGRP0000002894057.719754.6318
ENSG00000163950homo_sapiensENSP0000041768687.407485.1852chinchilla_lanigeraENSCLAP0000001183688.389586.1423
ENSG00000163950homo_sapiensENSP0000041768691.481586.2963cervus_hanglu_yarkandensisENSCHYP0000003940189.818284.7273
ENSG00000163950homo_sapiensENSP0000041768690.370484.8148catagonus_wagneriENSCWAP0000002810787.455282.0788
ENSG00000163950homo_sapiensENSP0000041768692.96389.6296ictidomys_tridecemlineatusENSSTOP0000002551991.272788
ENSG00000163950homo_sapiensENSP0000041768695.925992.5926otolemur_garnettiiENSOGAP0000000871995.925992.5926
ENSG00000163950homo_sapiensENSP0000041768663.333360.3704cebus_imitatorENSCCAP000000166909085.7895
ENSG00000163950homo_sapiensENSP0000041768691.481588.1481urocitellus_parryiiENSUPAP0001000332451.244849.3776
ENSG00000163950homo_sapiensENSP0000041768690.740785.1852moschus_moschiferusENSMMSP0000001474389.090983.6364
ENSG00000163950homo_sapiensENSP0000041768694.444494.0741rhinopithecus_roxellanaENSRROP0000001149393.065792.7007
ENSG00000163950homo_sapiensENSP0000041768693.333388.8889mus_pahariMGP_PahariEiJ_P003076191.636487.2727
ENSG00000163950homo_sapiensENSP0000041768694.814892.963propithecus_coquereliENSPCOP0000001175194.814892.963
ENSG00000163950homo_sapiensENSP0000041768641.481527.4074caenorhabditis_elegansR06F6.1.129.319419.3717
ENSG00000163950homo_sapiensENSP0000041768638.148125.9259drosophila_melanogasterFBpp008477837.318825.3623
ENSG00000163950homo_sapiensENSP0000041768625.185218.8889ciona_intestinalisENSCINP0000003012951.515238.6364
ENSG00000163950homo_sapiensENSP0000041768629.629625.1852petromyzon_marinusENSPMAP0000000329571.428660.7143
ENSG00000163950homo_sapiensENSP0000041768668.518553.7037callorhinchus_miliiENSCMIP0000002303956.748544.4785
ENSG00000163950homo_sapiensENSP0000041768667.03754.0741latimeria_chalumnaeENSLACP0000001659161.774749.8294
ENSG00000163950homo_sapiensENSP0000041768669.259355.5556lepisosteus_oculatusENSLOCP0000001353262.751750.3356
ENSG00000163950homo_sapiensENSP0000041768659.629645.9259clupea_harengusENSCHAP0000000091461.450447.3282
ENSG00000163950homo_sapiensENSP000004176866047.037danio_rerioENSDARP0000014043753.642442.053
ENSG00000163950homo_sapiensENSP0000041768657.407443.3333carassius_auratusENSCARP0000011920356.569342.7007
ENSG00000163950homo_sapiensENSP0000041768653.703743.3333carassius_auratusENSCARP0000001585767.441954.4186
ENSG00000163950homo_sapiensENSP0000041768661.481549.2593astyanax_mexicanusENSAMXP0000001495461.029448.8971
ENSG00000163950homo_sapiensENSP0000041768655.185247.037ictalurus_punctatusENSIPUP0000002480257.307748.8462
ENSG00000163950homo_sapiensENSP0000041768664.074151.4815esox_luciusENSELUP0000005702262.230250
ENSG00000163950homo_sapiensENSP0000041768655.185244.8148electrophorus_electricusENSEEEP0000001771362.869251.0549
ENSG00000163950homo_sapiensENSP0000041768664.444451.1111oncorhynchus_kisutchENSOKIP0000504681163.736350.5494
ENSG00000163950homo_sapiensENSP0000041768658.148147.037oncorhynchus_kisutchENSOKIP0000501682858.364347.2119
ENSG00000163950homo_sapiensENSP0000041768654.814843.7037oncorhynchus_mykissENSOMYP0000000994957.364345.7364
ENSG00000163950homo_sapiensENSP0000041768664.444451.1111oncorhynchus_mykissENSOMYP0000009888663.736350.5494
ENSG00000163950homo_sapiensENSP0000041768657.03746.2963salmo_salarENSSSAP0000007217461.111149.6032
ENSG00000163950homo_sapiensENSP0000041768664.074151.4815salmo_truttaENSSTUP0000006797263.3750.9158
ENSG00000163950homo_sapiensENSP0000041768661.481550.3704gadus_morhuaENSGMOP0000001643361.029450
ENSG00000163950homo_sapiensENSP0000041768658.888946.2963fundulus_heteroclitusENSFHEP0000002533960.456347.5285
ENSG00000163950homo_sapiensENSP0000041768660.740747.4074poecilia_reticulataENSPREP0000000658560.740747.4074
ENSG00000163950homo_sapiensENSP0000041768661.111147.7778xiphophorus_maculatusENSXMAP0000000132460.439647.2527
ENSG00000163950homo_sapiensENSP0000041768658.888948.1481oryzias_latipesENSORLP0000004050159.328448.5075
ENSG00000163950homo_sapiensENSP0000041768662.592650.3704cyclopterus_lumpusENSCLMP0000500853660.791448.9209
ENSG00000163950homo_sapiensENSP0000041768661.851948.5185oreochromis_niloticusENSONIP0000006602560.071947.1223
ENSG00000163950homo_sapiensENSP0000041768661.111147.7778haplochromis_burtoniENSHBUP0000002284859.352546.4029
ENSG00000163950homo_sapiensENSP0000041768661.111147.7778astatotilapia_callipteraENSACLP0000001029059.352546.4029
ENSG00000163950homo_sapiensENSP0000041768660.740746.2963sparus_aurataENSSAUP0001002825058.781444.8029
ENSG00000163950homo_sapiensENSP0000041768660.740748.1481lates_calcariferENSLCAP0001002175457.950545.9364
ENSG00000163950homo_sapiensENSP0000041768668.148154.8148xenopus_tropicalisENSXETP0000000840872.440958.2677
ENSG00000163950homo_sapiensENSP0000041768680.370471.8519chrysemys_picta_belliiENSCPBP0000000091277.777869.534
ENSG00000163950homo_sapiensENSP0000041768674.074164.4444sphenodon_punctatusENSSPUP0000002083176.335966.4122
ENSG00000163950homo_sapiensENSP0000041768672.222264.0741crocodylus_porosusENSCPRP0000500181761.708954.7468
ENSG00000163950homo_sapiensENSP0000041768667.03757.4074laticauda_laticaudataENSLLTP0000000634372.983962.5
ENSG00000163950homo_sapiensENSP0000041768665.925957.037notechis_scutatusENSNSUP0000001093572.357762.6016
ENSG00000163950homo_sapiensENSP0000041768667.407458.5185pseudonaja_textilisENSPTXP0000001589473.387163.7097
ENSG00000163950homo_sapiensENSP0000041768678.518571.4815anas_platyrhynchos_platyrhynchosENSAPLP0000001588753.535448.7374
ENSG00000163950homo_sapiensENSP000004176868070.7407gallus_gallusENSGALP0001002322348.868843.2127
ENSG00000163950homo_sapiensENSP0000041768671.111163.7037meleagris_gallopavoENSMGAP0000001380680.672372.2689
ENSG00000163950homo_sapiensENSP0000041768677.03768.1481serinus_canariaENSSCAP0000002089475.912467.1533
ENSG00000163950homo_sapiensENSP0000041768676.296368.1481parus_majorENSPMJP0000002266568.666761.3333
ENSG00000163950homo_sapiensENSP0000041768657.777845.5556neolamprologus_brichardiENSNBRP000000077636047.3077
ENSG00000163950homo_sapiensENSP0000041768667.03758.1481naja_najaENSNNAP0000001211272.690863.0522
ENSG00000163950homo_sapiensENSP0000041768673.703764.4444podarcis_muralisENSPMRP0000000560575.954266.4122
ENSG00000163950homo_sapiensENSP0000041768675.185266.6667geospiza_fortisENSGFOP0000001038373.818265.4545
ENSG00000163950homo_sapiensENSP0000041768677.03768.8889taeniopygia_guttataENSTGUP0000001096175.912467.8832
ENSG00000163950homo_sapiensENSP0000041768671.851959.6296erpetoichthys_calabaricusENSECRP0000002760966.211654.9488
ENSG00000163950homo_sapiensENSP0000041768661.111147.037kryptolebias_marmoratusENSKMAP0000001089859.352545.6835
ENSG00000163950homo_sapiensENSP0000041768671.481561.1111salvator_merianaeENSSMRP0000002963773.664162.9771
ENSG00000163950homo_sapiensENSP0000041768658.518547.7778oryzias_javanicusENSOJAP0000003724260.07649.0494
ENSG00000163950homo_sapiensENSP0000041768656.666748.8889amphilophus_citrinellusENSACIP0000002882559.073450.9653
ENSG00000163950homo_sapiensENSP0000041768659.629648.1481dicentrarchus_labraxENSDLAP0000500981458.545547.2727
ENSG00000163950homo_sapiensENSP0000041768661.111148.5185amphiprion_perculaENSAPEP0000002477658.510646.4539
ENSG00000163950homo_sapiensENSP0000041768662.222249.2593oryzias_sinensisENSOSIP0000004889041.584232.9208
ENSG00000163950homo_sapiensENSP0000041768679.629671.1111gopherus_evgoodeiENSGEVP0000500234077.617369.3141
ENSG00000163950homo_sapiensENSP0000041768679.259371.1111chelonoidis_abingdoniiENSCABP0000000536976.702568.8172
ENSG00000163950homo_sapiensENSP0000041768661.111148.5185seriola_dumeriliENSSDUP000000010356047.6364
ENSG00000163950homo_sapiensENSP0000041768647.03735.9259cottoperca_gobioENSCGOP0000000889344.250933.7979
ENSG00000163950homo_sapiensENSP0000041768679.629671.1111struthio_camelus_australisENSSCUP0000002108375.174867.1329
ENSG00000163950homo_sapiensENSP0000041768678.518571.1111anser_brachyrhynchusENSABRP0000000995475.444868.3274
ENSG00000163950homo_sapiensENSP0000041768656.296345.1852gasterosteus_aculeatusENSGACP0000002590561.788649.5935
ENSG00000163950homo_sapiensENSP000004176866048.5185cynoglossus_semilaevisENSCSEP0000003173059.124147.8102
ENSG00000163950homo_sapiensENSP0000041768660.740747.4074poecilia_formosaENSPFOP0000000043160.740747.4074
ENSG00000163950homo_sapiensENSP0000041768653.703743.3333myripristis_murdjanENSMMDP0000503077854.511343.985
ENSG00000163950homo_sapiensENSP000004176866047.7778myripristis_murdjanENSMMDP0000501280357.243845.583
ENSG00000163950homo_sapiensENSP0000041768660.370448.5185sander_luciopercaENSSLUP0000003020659.926548.1618
ENSG00000163950homo_sapiensENSP0000041768678.148169.2593strigops_habroptilaENSSHBP0000501612954.663248.4456
ENSG00000163950homo_sapiensENSP0000041768661.111148.5185amphiprion_ocellarisENSAOCP0000001928058.510646.4539
ENSG00000163950homo_sapiensENSP0000041768664.814857.037terrapene_carolina_triunguisENSTMTP0000000323875.757666.6667
ENSG00000163950homo_sapiensENSP0000041768662.96350hucho_huchoENSHHUP0000001615961.818249.0909
ENSG00000163950homo_sapiensENSP0000041768664.074151.1111hucho_huchoENSHHUP0000001309163.3750.5494
ENSG00000163950homo_sapiensENSP0000041768661.481549.2593betta_splendensENSBSLP0000001006258.04246.5035
ENSG00000163950homo_sapiensENSP000004176866048.8889pygocentrus_nattereriENSPNAP0000003126560.902349.6241
ENSG00000163950homo_sapiensENSP0000041768663.703751.8519anabas_testudineusENSATEP0000002357260.777449.47
ENSG00000163950homo_sapiensENSP0000041768636.666729.2593seriola_lalandi_dorsalisENSSLDP0000002967558.928647.0238
ENSG00000163950homo_sapiensENSP0000041768647.03735.9259seriola_lalandi_dorsalisENSSLDP0000000951748.28936.8821
ENSG00000163950homo_sapiensENSP0000041768659.629648.5185labrus_bergyltaENSLBEP0000003278658.333347.4638
ENSG00000163950homo_sapiensENSP0000041768661.111147.7778pundamilia_nyerereiENSPNYP0000000711659.352546.4029
ENSG00000163950homo_sapiensENSP0000041768658.888945.5556mastacembelus_armatusENSMAMP0000000144456.583643.7722
ENSG00000163950homo_sapiensENSP0000041768662.222249.2593stegastes_partitusENSSPAP0000000517359.786547.331
ENSG00000163950homo_sapiensENSP0000041768664.444450.7407oncorhynchus_tshawytschaENSOTSP0000510113163.736350.1832
ENSG00000163950homo_sapiensENSP0000041768653.703742.5926oncorhynchus_tshawytschaENSOTSP0000508512060.669548.1172
ENSG00000163950homo_sapiensENSP0000041768661.481548.5185acanthochromis_polyacanthusENSAPOP0000000346458.865246.4539
ENSG00000163950homo_sapiensENSP0000041768678.518570aquila_chrysaetos_chrysaetosENSACCP0002000014377.372368.9781
ENSG00000163950homo_sapiensENSP0000041768658.148145.9259nothobranchius_furzeriENSNFUP0001503057056.678744.7653
ENSG00000163950homo_sapiensENSP000004176866047.4074cyprinodon_variegatusENSCVAP0000003079760.902348.1203
ENSG00000163950homo_sapiensENSP0000041768659.629648.8889denticeps_clupeoidesENSDCDP0000006290762.645951.3619
ENSG00000163950homo_sapiensENSP000004176866049.2593larimichthys_croceaENSLCRP0000502867658.909148.3636
ENSG00000163950homo_sapiensENSP0000041768660.370448.5185takifugu_rubripesENSTRUP0000000164559.272747.6364
ENSG00000163950homo_sapiensENSP0000041768677.03769.2593ficedula_albicollisENSFALP0000001044075.912468.2482
ENSG00000163950homo_sapiensENSP0000041768660.370447.4074hippocampus_comesENSHCOP0000001076059.926547.0588
ENSG00000163950homo_sapiensENSP0000041768658.148145.5556cyprinus_carpio_carpioENSCCRP0000003076056.474844.2446
ENSG00000163950homo_sapiensENSP0000041768658.148144.0741cyprinus_carpio_carpioENSCCRP0000001692950.97438.6364
ENSG00000163950homo_sapiensENSP0000041768678.888970coturnix_japonicaENSCJPP0000500491477.737268.9781
ENSG00000163950homo_sapiensENSP0000041768660.740747.4074poecilia_latipinnaENSPLAP0000000620360.740747.4074
ENSG00000163950homo_sapiensENSP0000041768661.851946.6667sinocyclocheilus_grahamiENSSGRP0000003995460.727345.8182
ENSG00000163950homo_sapiensENSP0000041768658.518545.5556sinocyclocheilus_grahamiENSSGRP0000003872753.559341.6949
ENSG00000163950homo_sapiensENSP0000041768661.111147.7778maylandia_zebraENSMZEP0000502304659.352546.4029
ENSG00000163950homo_sapiensENSP0000041768654.074144.0741tetraodon_nigroviridisENSTNIP0000000088762.393250.8547
ENSG00000163950homo_sapiensENSP0000041768667.03754.0741paramormyrops_kingsleyaeENSPKIP0000002199256.211245.3416
ENSG00000163950homo_sapiensENSP0000041768665.185253.7037scleropages_formosusENSSFOP0001503027364.233652.9197
ENSG00000163950homo_sapiensENSP0000041768651.111140leptobrachium_leishanenseENSLLEP0000000313562.443448.8688
ENSG00000163950homo_sapiensENSP0000041768667.407452.5926leptobrachium_leishanenseENSLLEP0000000543663.414649.4774
ENSG00000163950homo_sapiensENSP0000041768660.370447.037scophthalmus_maximusENSSMAP0000002620853.26841.5033
ENSG00000163950homo_sapiensENSP0000041768657.777848.1481oryzias_melastigmaENSOMEP0000002802659.54249.6183

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0002191involved_in cap-dependent translational initiation1IDAHomo_sapiens(9606)Process
GO:0003723enables RNA binding1HDAHomo_sapiens(9606)Function
GO:0003729enables mRNA binding2IBA,IDAHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005634located_in nucleus1IDAHomo_sapiens(9606)Component
GO:0005654located_in nucleoplasm2IDA,TASHomo_sapiens(9606)Component
GO:0005730located_in nucleolus1IDAHomo_sapiens(9606)Component
GO:0005737is_active_in cytoplasm3IBA,IDA,NASHomo_sapiens(9606)Component
GO:0005829located_in cytosol2IDA,TASHomo_sapiens(9606)Component
GO:0006398involved_in mRNA 3-end processing by stem-loop binding and cleavage2IBA,ISSHomo_sapiens(9606)Process
GO:0042802enables identical protein binding1IPIHomo_sapiens(9606)Function
GO:0051028involved_in mRNA transport2IBA,IDAHomo_sapiens(9606)Process
GO:0062073part_of histone mRNA stem-loop binding complex1IPIHomo_sapiens(9606)Component
GO:0071204part_of histone pre-mRNA 3end processing complex2IBA,ISSHomo_sapiens(9606)Component
GO:0071207enables histone pre-mRNA stem-loop binding2IBA,ISSHomo_sapiens(9606)Function
GO:0071208enables histone pre-mRNA DCP binding1ISSHomo_sapiens(9606)Function
GO:1990904part_of ribonucleoprotein complex1TASHomo_sapiens(9606)Component

Expression