Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases Cancer
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions N.A.
Localizations Stress granucle
BulkPerturb-seq DataSet_01_413

Description

Ensembl ID ENSG00000087077 Gene ID 7205 Accession 12311
Symbol TRIP6 Alias OIP1;OIP-1;ZRP-1;TRIP-6;TRIP6i2 Full Name thyroid hormone receptor interactor 6
Status Confidence Length 6068 bases Strand Plus strand
Position 7 : 100867387 - 100873454 RNA binding domain N.A.
Summary This gene is a member of the zyxin family and encodes a protein with three LIM zinc-binding domains. This protein localizes to focal adhesion sites and along actin stress fibers. Recruitment of this protein to the plasma membrane occurs in a lysophosphatidic acid (LPA)-dependent manner and it regulates LPA-induced cell migration. Alternatively spliced variants which encode different protein isoforms have been described; however, not all variants have been fully characterized. [provided by RefSeq, Jul 2008]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal
32585685 Topological features of integrin adhesion complexes revealed by multiplexed proximity biotinylation. R Megan Chastney 2020-08-03 The Journal of cell biology

Transcripts

Name Transcript ID bp Protein Translation ID
TRIP6-208 ENST00000496260 451 No protein -
TRIP6-202 ENST00000417475 992 106aa ENSP00000413817
TRIP6-201 ENST00000200457 1693 476aa ENSP00000200457
TRIP6-206 ENST00000476870 1750 No protein -
TRIP6-204 ENST00000437505 875 80aa ENSP00000410736
TRIP6-209 ENST00000619988 1303 80aa ENSP00000479865
TRIP6-205 ENST00000463125 835 No protein -
TRIP6-203 ENST00000429658 646 215aa ENSP00000389194
TRIP6-207 ENST00000488670 615 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
60581Plasminogen Activator Inhibitor 12.1090000E-00624578379
60586Plasminogen Activator Inhibitor 12.6770000E-00924578379
60615Plasminogen Activator Inhibitor 13.6140000E-00924578379

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000087077homo_sapiensENSP0000032442242.307732.6923homo_sapiensENSP0000020045750.840339.2857

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000087077homo_sapiensENSP0000020045789.285788.6555nomascus_leucogenysENSNLEP0000001455495.078394.4072
ENSG00000087077homo_sapiensENSP0000020045799.159798.9496pan_paniscusENSPPAP0000001745099.159798.9496
ENSG00000087077homo_sapiensENSP0000020045798.529498.5294pongo_abeliiENSPPYP0000001954198.529498.5294
ENSG00000087077homo_sapiensENSP0000020045799.369899.1597pan_troglodytesENSPTRP0000003340499.369899.1597
ENSG00000087077homo_sapiensENSP0000020045799.159799.1597gorilla_gorillaENSGGOP0000000148699.159799.1597
ENSG00000087077homo_sapiensENSP0000020045769.327763.8655ornithorhynchus_anatinusENSOANP0000005216471.739166.087
ENSG00000087077homo_sapiensENSP0000020045777.100872.6891sarcophilus_harrisiiENSSHAP0000002449178.755474.2489
ENSG00000087077homo_sapiensENSP0000020045776.680772.2689notamacropus_eugeniiENSMEUP0000001512383.143578.3599
ENSG00000087077homo_sapiensENSP0000020045791.806789.4958dasypus_novemcinctusENSDNOP000000029559289.6842
ENSG00000087077homo_sapiensENSP0000020045741.806738.4454erinaceus_europaeusENSEEUP0000001189259.939855.1205
ENSG00000087077homo_sapiensENSP0000020045744.537843.0672echinops_telfairiENSETEP0000001267863.663761.5616
ENSG00000087077homo_sapiensENSP0000020045796.428696.2185callithrix_jacchusENSCJAP0000002754596.428696.2185
ENSG00000087077homo_sapiensENSP0000020045798.529498.3193cercocebus_atysENSCATP0000004022598.529498.3193
ENSG00000087077homo_sapiensENSP0000020045761.764761.3445macaca_fascicularisENSMFAP0000002132895.145694.4984
ENSG00000087077homo_sapiensENSP0000020045737.60534.4538macaca_mulattaENSMMUP0000007381558.881653.9474
ENSG00000087077homo_sapiensENSP0000020045798.529498.3193macaca_mulattaENSMMUP0000002798898.529498.3193
ENSG00000087077homo_sapiensENSP0000020045797.899297.6891macaca_nemestrinaENSMNEP0000003323197.899297.6891
ENSG00000087077homo_sapiensENSP0000020045798.319398.1092papio_anubisENSPANP0000001585698.319398.1092
ENSG00000087077homo_sapiensENSP0000020045798.529498.3193mandrillus_leucophaeusENSMLEP0000003621498.529498.3193
ENSG00000087077homo_sapiensENSP0000020045774.579872.479tursiops_truncatusENSTTRP0000001052774.736872.6316
ENSG00000087077homo_sapiensENSP0000020045790.756386.9748vulpes_vulpesENSVVUP0000003251689.256285.5372
ENSG00000087077homo_sapiensENSP0000020045790.756387.1849mus_spretusMGP_SPRETEiJ_P00742999086.4583
ENSG00000087077homo_sapiensENSP0000020045784.453880.042equus_asinusENSEASP0000505330164.734361.3527
ENSG00000087077homo_sapiensENSP0000020045793.697590.7563capra_hircusENSCHIP0000001148392.723589.8129
ENSG00000087077homo_sapiensENSP0000020045792.647190.5462loxodonta_africanaENSLAFP0000001882791.87589.7917
ENSG00000087077homo_sapiensENSP0000020045792.43789.7059panthera_leoENSPLOP0000002017292.050289.3305
ENSG00000087077homo_sapiensENSP0000020045793.277390.5462ailuropoda_melanoleucaENSAMEP0000001531494.067891.3136
ENSG00000087077homo_sapiensENSP0000020045757.983255.2521bos_indicus_hybridENSBIXP0000501585388.178984.0256
ENSG00000087077homo_sapiensENSP0000020045793.697591.1765bos_indicus_hybridENSBIXP0000500632587.279884.9315
ENSG00000087077homo_sapiensENSP0000020045784.663980.2521equus_caballusENSECAP0000007407264.895361.5137
ENSG00000087077homo_sapiensENSP0000020045792.43789.2857canis_lupus_familiarisENSCAFP0084500095592.050288.9121
ENSG00000087077homo_sapiensENSP0000020045792.226989.2857panthera_pardusENSPPRP0000002053393.205990.2335
ENSG00000087077homo_sapiensENSP0000020045793.697591.3866marmota_marmota_marmotaENSMMMP0000001323492.148889.876
ENSG00000087077homo_sapiensENSP0000020045794.747992.6471balaenoptera_musculusENSBMSP0001001504493.76391.684
ENSG00000087077homo_sapiensENSP0000020045792.226990.1261cavia_porcellusENSCPOP0000000156891.458389.375
ENSG00000087077homo_sapiensENSP0000020045792.43789.7059felis_catusENSFCAP0000000636392.050289.3305
ENSG00000087077homo_sapiensENSP0000020045792.647189.916ursus_americanusENSUAMP0000003697192.259489.5397
ENSG00000087077homo_sapiensENSP0000020045772.47967.0168monodelphis_domesticaENSMODP0000005521369.416564.1851
ENSG00000087077homo_sapiensENSP0000020045794.117692.0168monodon_monocerosENSMMNP0001501197292.753690.6832
ENSG00000087077homo_sapiensENSP0000020045793.277390.7563sus_scrofaENSSSCP0000002175692.307789.8129
ENSG00000087077homo_sapiensENSP0000020045794.747993.0672microcebus_murinusENSMICP0000000860793.958392.2917
ENSG00000087077homo_sapiensENSP0000020045792.43789.916octodon_degusENSODEP0000002280391.476188.9813
ENSG00000087077homo_sapiensENSP0000020045777.100873.1092jaculus_jaculusENSJJAP0000002334288.221283.6538
ENSG00000087077homo_sapiensENSP0000020045793.487490.9664ovis_aries_rambouilletENSOARP0002001908392.515690.0208
ENSG00000087077homo_sapiensENSP0000020045792.647189.916ursus_maritimusENSUMAP0000001538792.259489.5397
ENSG00000087077homo_sapiensENSP0000020045769.95866.8067ochotona_princepsENSOPRP0000000178069.37566.25
ENSG00000087077homo_sapiensENSP0000020045782.983281.3025delphinapterus_leucasENSDLEP000000114027977.4
ENSG00000087077homo_sapiensENSP0000020045792.647190.1261physeter_catodonENSPCTP0000502905390.368987.9098
ENSG00000087077homo_sapiensENSP0000020045790.546286.7647mus_caroliMGP_CAROLIEiJ_P007148589.791786.0417
ENSG00000087077homo_sapiensENSP0000020045790.756387.1849mus_musculusENSMUSP000000241199086.4583
ENSG00000087077homo_sapiensENSP0000020045791.596688.8655dipodomys_ordiiENSDORP0000000522290.456487.7593
ENSG00000087077homo_sapiensENSP0000020045796.428696.2185aotus_nancymaaeENSANAP0000003034096.428696.2185
ENSG00000087077homo_sapiensENSP0000020045797.058896.6387saimiri_boliviensis_boliviensisENSSBOP0000003971097.058896.6387
ENSG00000087077homo_sapiensENSP0000020045798.739598.5294chlorocebus_sabaeusENSCSAP0000001401098.739598.5294
ENSG00000087077homo_sapiensENSP0000020045763.655561.7647tupaia_belangeriENSTBEP0000000428063.52261.6352
ENSG00000087077homo_sapiensENSP0000020045791.596687.605mesocricetus_auratusENSMAUP0000001516890.833386.875
ENSG00000087077homo_sapiensENSP0000020045794.117692.0168phocoena_sinusENSPSNP0000001047792.753690.6832
ENSG00000087077homo_sapiensENSP0000020045792.43790.1261camelus_dromedariusENSCDRP0000502174591.476189.1892
ENSG00000087077homo_sapiensENSP0000020045794.117691.8067carlito_syrichtaENSTSYP0000002101194.315892
ENSG00000087077homo_sapiensENSP0000020045791.596688.8655panthera_tigris_altaicaENSPTIP0000001589292.56989.8089
ENSG00000087077homo_sapiensENSP0000020045784.663981.5126rattus_norvegicusENSRNOP0000008494883.092880
ENSG00000087077homo_sapiensENSP0000020045794.95893.4874prolemur_simusENSPSMP0000002742794.166792.7083
ENSG00000087077homo_sapiensENSP0000020045792.647189.0756microtus_ochrogasterENSMOCP0000000425791.87588.3333
ENSG00000087077homo_sapiensENSP0000020045750.630346.8487sorex_araneusENSSARP0000001033374.844769.2547
ENSG00000087077homo_sapiensENSP0000020045792.647188.6555peromyscus_maniculatus_bairdiiENSPEMP0000000757491.68487.7339
ENSG00000087077homo_sapiensENSP0000020045792.647189.0756bos_mutusENSBMUP0000002466492.647189.0756
ENSG00000087077homo_sapiensENSP0000020045790.126186.5546mus_spicilegusENSMSIP0000001139289.37585.8333
ENSG00000087077homo_sapiensENSP0000020045792.43788.6555cricetulus_griseus_chok1gshdENSCGRP0000101967491.666787.9167
ENSG00000087077homo_sapiensENSP0000020045771.428668.2773pteropus_vampyrusENSPVAP0000001440270.981267.8497
ENSG00000087077homo_sapiensENSP0000020045790.966487.1849myotis_lucifugusENSMLUP0000000906989.462885.7438
ENSG00000087077homo_sapiensENSP0000020045778.151374.1597vombatus_ursinusENSVURP0001000131080.172476.0776
ENSG00000087077homo_sapiensENSP0000020045792.647190.1261rhinolophus_ferrumequinumENSRFEP0001000578591.493889.0042
ENSG00000087077homo_sapiensENSP0000020045792.647189.916neovison_visonENSNVIP0000000193592.259489.5397
ENSG00000087077homo_sapiensENSP0000020045793.697591.1765bos_taurusENSBTAP0000000150392.723590.2287
ENSG00000087077homo_sapiensENSP0000020045767.226965.3361heterocephalus_glaber_femaleENSHGLP0000005425970.796568.8053
ENSG00000087077homo_sapiensENSP0000020045798.529498.1092rhinopithecus_bietiENSRBIP0000000894898.529498.1092
ENSG00000087077homo_sapiensENSP0000020045792.43789.2857canis_lupus_dingoENSCAFP0002001723492.050288.9121
ENSG00000087077homo_sapiensENSP0000020045794.117692.0168sciurus_vulgarisENSSVLP0000502158592.56290.4959
ENSG00000087077homo_sapiensENSP0000020045774.789970.3782phascolarctos_cinereusENSPCIP0000005458367.043363.0885
ENSG00000087077homo_sapiensENSP0000020045791.386688.6555procavia_capensisENSPCAP0000000147490.814288.1002
ENSG00000087077homo_sapiensENSP0000020045787.815184.2437nannospalax_galiliENSNGAP0000002224586.72283.195
ENSG00000087077homo_sapiensENSP0000020045788.445485.5042bos_grunniensENSBGRP0000002928885.050582.2222
ENSG00000087077homo_sapiensENSP0000020045793.067290.1261chinchilla_lanigeraENSCLAP0000000248892.291789.375
ENSG00000087077homo_sapiensENSP0000020045793.697590.5462cervus_hanglu_yarkandensisENSCHYP0000002273092.723589.605
ENSG00000087077homo_sapiensENSP0000020045792.857190.7563catagonus_wagneriENSCWAP0000002133191.13489.0722
ENSG00000087077homo_sapiensENSP0000020045793.487491.1765ictidomys_tridecemlineatusENSSTOP0000002028091.942189.6694
ENSG00000087077homo_sapiensENSP0000020045793.697591.5966otolemur_garnettiiENSOGAP0000001226692.916790.8333
ENSG00000087077homo_sapiensENSP0000020045796.638796.4286cebus_imitatorENSCCAP0000003810896.638796.4286
ENSG00000087077homo_sapiensENSP0000020045793.487490.9664urocitellus_parryiiENSUPAP0001002204492.708390.2083
ENSG00000087077homo_sapiensENSP0000020045793.697590.7563moschus_moschiferusENSMMSP0000001487382.439979.8521
ENSG00000087077homo_sapiensENSP0000020045798.319397.8992rhinopithecus_roxellanaENSRROP0000001449898.319397.8992
ENSG00000087077homo_sapiensENSP0000020045790.966486.9748mus_pahariMGP_PahariEiJ_P005977690.208386.25
ENSG00000087077homo_sapiensENSP0000020045794.747992.8571propithecus_coquereliENSPCOP0000000303093.958392.0833
ENSG00000087077homo_sapiensENSP0000020045724.579815.9664caenorhabditis_elegansF09B9.2b.118.309911.8936
ENSG00000087077homo_sapiensENSP0000020045737.60527.3109eptatretus_burgeriENSEBUP0000000462040.044729.0828
ENSG00000087077homo_sapiensENSP0000020045765.966453.1513danio_rerioENSDARP0000014289554.991244.3082
ENSG00000087077homo_sapiensENSP0000020045765.546252.1008carassius_auratusENSCARP0000011899853.979242.9066
ENSG00000087077homo_sapiensENSP0000020045765.966453.5714oncorhynchus_mykissENSOMYP0000002689857.090946.3636
ENSG00000087077homo_sapiensENSP0000020045760.714347.479oncorhynchus_mykissENSOMYP0000007133750.086739.1681
ENSG00000087077homo_sapiensENSP0000020045753.781542.8571oncorhynchus_mykissENSOMYP0000012228259.813147.6636
ENSG00000087077homo_sapiensENSP0000020045765.966453.5714oncorhynchus_mykissENSOMYP0000002688457.090946.3636
ENSG00000087077homo_sapiensENSP0000020045761.344546.8487salmo_salarENSSSAP0000011467650.959938.918
ENSG00000087077homo_sapiensENSP0000020045731.722721.4286haplochromis_burtoniENSHBUP0000002099237.562225.3731
ENSG00000087077homo_sapiensENSP0000020045761.554648.3193hucho_huchoENSHHUP0000004175746.581936.566
ENSG00000087077homo_sapiensENSP0000020045731.932820.3782anabas_testudineusENSATEP0000001091639.175325
ENSG00000087077homo_sapiensENSP0000020045732.773121.6387labrus_bergyltaENSLBEP0000002756231.771920.9776
ENSG00000087077homo_sapiensENSP0000020045761.344548.1092oncorhynchus_tshawytschaENSOTSP0000510130550.431839.5509
ENSG00000087077homo_sapiensENSP0000020045765.336152.3109cyprinus_carpio_carpioENSCCRP0000005325753.806243.0796
ENSG00000087077homo_sapiensENSP0000020045765.336153.1513cyprinus_carpio_carpioENSCCRP0000008641154.181244.0767
ENSG00000087077homo_sapiensENSP0000020045732.352922.8992scleropages_formosusENSSFOP0001501596338.118826.9802
ENSG00000087077homo_sapiensENSP0000020045765.126153.1513scophthalmus_maximusENSSMAP0000001389453.91344

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0001725is_active_in stress fiber1IBAHomo_sapiens(9606)Component
GO:0003723enables RNA binding1HDAHomo_sapiens(9606)Function
GO:0005149enables interleukin-1 receptor binding1IDAHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005634located_in nucleus1IDAHomo_sapiens(9606)Component
GO:0005737is_active_in cytoplasm1IBAHomo_sapiens(9606)Component
GO:0005829located_in cytosol1IDAHomo_sapiens(9606)Component
GO:0005856located_in cytoskeleton1IDAHomo_sapiens(9606)Component
GO:0005886located_in plasma membrane1IDAHomo_sapiens(9606)Component
GO:0005925located_in focal adhesion3HDA,IBA,IDAHomo_sapiens(9606)Component
GO:0007165involved_in signal transduction1IBAHomo_sapiens(9606)Process
GO:0019900enables kinase binding1IPIHomo_sapiens(9606)Function
GO:0030335involved_in positive regulation of cell migration1IMPHomo_sapiens(9606)Process
GO:0043009involved_in chordate embryonic development1IEAHomo_sapiens(9606)Process
GO:0046872enables metal ion binding1IEAHomo_sapiens(9606)Function
GO:0046966enables nuclear thyroid hormone receptor binding1NASHomo_sapiens(9606)Function
GO:0048041involved_in focal adhesion assembly1NASHomo_sapiens(9606)Process
GO:1901224involved_in positive regulation of NIK/NF-kappaB signaling2IBA,IDAHomo_sapiens(9606)Process

Expression