RBP Type
Canonical_RBPs
Diseases
Cancer
Drug
N.A.
Main interacting RNAs
rRNA
Moonlighting functions
N.A.
Localizations
N.A.
BulkPerturb-seq
N.A.
Ensembl ID ENSG00000204822 Gene ID
116540
Accession
16684
Symbol
MRPL53
Alias
mL53;L53MT
Full Name
mitochondrial ribosomal protein L53
Status
Confidence
Length
706 bases
Strand
Minus strand
Position
2 : 74471982 - 74472687
RNA binding domain
MRP_L53
Summary
Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 39S subunit protein. A pseudogene corresponding to this gene is found on chromosome 1p. [provided by RefSeq, Jul 2008]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
ENSP00000258105
MRP_L53
PF10780
1.9e-14
1
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
MRPL53-201
ENST00000258105
496
112aa
ENSP00000258105
MRPL53-202
ENST00000409710
386
70aa
ENSP00000386920
MRPL53-203
ENST00000467349
451
No protein
-
MRPL53-204
ENST00000468875
574
No protein
-
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
ENSG00000204822
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
ENSG00000204822 homo_sapiens ENSP00000258105 98.2143 97.3214 nomascus_leucogenys ENSNLEP00000027555 98.2143 97.3214 ENSG00000204822 homo_sapiens ENSP00000258105 99.1071 99.1071 pan_paniscus ENSPPAP00000013445 99.1071 99.1071 ENSG00000204822 homo_sapiens ENSP00000258105 99.1071 99.1071 pan_troglodytes ENSPTRP00000062041 99.1071 99.1071 ENSG00000204822 homo_sapiens ENSP00000258105 99.1071 99.1071 gorilla_gorilla ENSGGOP00000006363 99.1071 99.1071 ENSG00000204822 homo_sapiens ENSP00000258105 68.75 57.1429 ornithorhynchus_anatinus ENSOANP00000038607 34.5291 28.6996 ENSG00000204822 homo_sapiens ENSP00000258105 76.7857 66.0714 notamacropus_eugenii ENSMEUP00000008132 81.1321 69.8113 ENSG00000204822 homo_sapiens ENSP00000258105 83.9286 81.25 dasypus_novemcinctus ENSDNOP00000027389 85.4545 82.7273 ENSG00000204822 homo_sapiens ENSP00000258105 91.9643 87.5 echinops_telfairi ENSETEP00000010200 91.1504 86.7257 ENSG00000204822 homo_sapiens ENSP00000258105 97.3214 91.9643 callithrix_jacchus ENSCJAP00000056369 97.3214 91.9643 ENSG00000204822 homo_sapiens ENSP00000258105 97.3214 94.6429 cercocebus_atys ENSCATP00000002128 97.3214 94.6429 ENSG00000204822 homo_sapiens ENSP00000258105 97.3214 94.6429 macaca_fascicularis ENSMFAP00000005984 61.9318 60.2273 ENSG00000204822 homo_sapiens ENSP00000258105 97.3214 94.6429 macaca_mulatta ENSMMUP00000077929 61.9318 60.2273 ENSG00000204822 homo_sapiens ENSP00000258105 97.3214 94.6429 macaca_nemestrina ENSMNEP00000034349 97.3214 94.6429 ENSG00000204822 homo_sapiens ENSP00000258105 97.3214 94.6429 papio_anubis ENSPANP00000023559 97.3214 94.6429 ENSG00000204822 homo_sapiens ENSP00000258105 96.4286 93.75 mandrillus_leucophaeus ENSMLEP00000015927 96.4286 93.75 ENSG00000204822 homo_sapiens ENSP00000258105 94.6429 93.75 tursiops_truncatus ENSTTRP00000012066 94.6429 93.75 ENSG00000204822 homo_sapiens ENSP00000258105 93.75 91.0714 vulpes_vulpes ENSVVUP00000005709 93.75 91.0714 ENSG00000204822 homo_sapiens ENSP00000258105 88.3929 83.9286 mus_spretus MGP_SPRETEiJ_P0077412 83.8983 79.661 ENSG00000204822 homo_sapiens ENSP00000258105 93.75 90.1786 equus_asinus ENSEASP00005054452 56.7568 54.5946 ENSG00000204822 homo_sapiens ENSP00000258105 75 71.4286 capra_hircus ENSCHIP00000022926 77.7778 74.0741 ENSG00000204822 homo_sapiens ENSP00000258105 86.6071 84.8214 capra_hircus ENSCHIP00000023769 75.7812 74.2188 ENSG00000204822 homo_sapiens ENSP00000258105 92.8571 91.0714 capra_hircus ENSCHIP00000005305 92.8571 91.0714 ENSG00000204822 homo_sapiens ENSP00000258105 77.6786 74.1071 loxodonta_africana ENSLAFP00000006699 87.8788 83.8384 ENSG00000204822 homo_sapiens ENSP00000258105 92.8571 91.0714 panthera_leo ENSPLOP00000008568 92.8571 91.0714 ENSG00000204822 homo_sapiens ENSP00000258105 93.75 91.0714 ailuropoda_melanoleuca ENSAMEP00000018206 93.75 91.0714 ENSG00000204822 homo_sapiens ENSP00000258105 94.6429 89.2857 oryctolagus_cuniculus ENSOCUP00000013178 93.8053 88.4956 ENSG00000204822 homo_sapiens ENSP00000258105 83.9286 79.4643 oryctolagus_cuniculus ENSOCUP00000045773 85.4545 80.9091 ENSG00000204822 homo_sapiens ENSP00000258105 92.8571 91.0714 panthera_pardus ENSPPRP00000015467 92.8571 91.0714 ENSG00000204822 homo_sapiens ENSP00000258105 89.2857 85.7143 marmota_marmota_marmota ENSMMMP00000004530 89.2857 85.7143 ENSG00000204822 homo_sapiens ENSP00000258105 91.0714 87.5 marmota_marmota_marmota ENSMMMP00000005175 91.0714 87.5 ENSG00000204822 homo_sapiens ENSP00000258105 93.75 91.9643 balaenoptera_musculus ENSBMSP00010017903 93.75 91.9643 ENSG00000204822 homo_sapiens ENSP00000258105 89.2857 83.9286 cavia_porcellus ENSCPOP00000023137 89.2857 83.9286 ENSG00000204822 homo_sapiens ENSP00000258105 92.8571 91.0714 felis_catus ENSFCAP00000029046 92.8571 91.0714 ENSG00000204822 homo_sapiens ENSP00000258105 72.3214 67.8571 ursus_americanus ENSUAMP00000028086 67.5 63.3333 ENSG00000204822 homo_sapiens ENSP00000258105 93.75 91.0714 bison_bison_bison ENSBBBP00000012936 93.75 91.0714 ENSG00000204822 homo_sapiens ENSP00000258105 93.75 92.8571 monodon_monoceros ENSMMNP00015010581 93.75 92.8571 ENSG00000204822 homo_sapiens ENSP00000258105 94.6429 91.9643 microcebus_murinus ENSMICP00000049178 94.6429 91.9643 ENSG00000204822 homo_sapiens ENSP00000258105 89.2857 83.9286 jaculus_jaculus ENSJJAP00000007128 89.2857 83.9286 ENSG00000204822 homo_sapiens ENSP00000258105 92.8571 91.9643 ovis_aries_rambouillet ENSOARP00020002199 92.8571 91.9643 ENSG00000204822 homo_sapiens ENSP00000258105 72.3214 67.8571 ursus_maritimus ENSUMAP00000001702 67.5 63.3333 ENSG00000204822 homo_sapiens ENSP00000258105 88.3929 83.9286 mus_caroli MGP_CAROLIEiJ_P0074518 83.8983 79.661 ENSG00000204822 homo_sapiens ENSP00000258105 88.3929 83.9286 mus_musculus ENSMUSP00000109571 83.8983 79.661 ENSG00000204822 homo_sapiens ENSP00000258105 92.8571 91.0714 mustela_putorius_furo ENSMPUP00000007997 92.8571 91.0714 ENSG00000204822 homo_sapiens ENSP00000258105 97.3214 91.9643 aotus_nancymaae ENSANAP00000028953 97.3214 91.9643 ENSG00000204822 homo_sapiens ENSP00000258105 96.4286 91.9643 saimiri_boliviensis_boliviensis ENSSBOP00000020739 96.4286 91.9643 ENSG00000204822 homo_sapiens ENSP00000258105 97.3214 95.5357 chlorocebus_sabaeus ENSCSAP00000011700 97.3214 95.5357 ENSG00000204822 homo_sapiens ENSP00000258105 85.7143 83.0357 tupaia_belangeri ENSTBEP00000015382 94.1176 91.1765 ENSG00000204822 homo_sapiens ENSP00000258105 91.9643 86.6071 mesocricetus_auratus ENSMAUP00000009464 86.5546 81.5126 ENSG00000204822 homo_sapiens ENSP00000258105 94.6429 93.75 phocoena_sinus ENSPSNP00000020469 94.6429 93.75 ENSG00000204822 homo_sapiens ENSP00000258105 93.75 91.0714 camelus_dromedarius ENSCDRP00005009121 73.9437 71.831 ENSG00000204822 homo_sapiens ENSP00000258105 93.75 92.8571 carlito_syrichta ENSTSYP00000020721 93.75 92.8571 ENSG00000204822 homo_sapiens ENSP00000258105 82.1429 76.7857 carlito_syrichta ENSTSYP00000018517 71.875 67.1875 ENSG00000204822 homo_sapiens ENSP00000258105 91.9643 91.0714 panthera_tigris_altaica ENSPTIP00000011118 91.9643 91.0714 ENSG00000204822 homo_sapiens ENSP00000258105 94.6429 92.8571 prolemur_simus ENSPSMP00000029305 94.6429 92.8571 ENSG00000204822 homo_sapiens ENSP00000258105 92.8571 87.5 microtus_ochrogaster ENSMOCP00000016196 88.1356 83.0508 ENSG00000204822 homo_sapiens ENSP00000258105 90.1786 84.8214 sorex_araneus ENSSARP00000009641 89.3805 84.0708 ENSG00000204822 homo_sapiens ENSP00000258105 90.1786 84.8214 peromyscus_maniculatus_bairdii ENSPEMP00000006529 83.4711 78.5124 ENSG00000204822 homo_sapiens ENSP00000258105 74.1071 70.5357 bos_mutus ENSBMUP00000017109 54.6053 51.9737 ENSG00000204822 homo_sapiens ENSP00000258105 88.3929 83.9286 mus_spicilegus ENSMSIP00000037912 83.8983 79.661 ENSG00000204822 homo_sapiens ENSP00000258105 89.2857 82.1429 cricetulus_griseus_chok1gshd ENSCGRP00001010744 84.0336 77.3109 ENSG00000204822 homo_sapiens ENSP00000258105 93.75 90.1786 pteropus_vampyrus ENSPVAP00000013162 93.75 90.1786 ENSG00000204822 homo_sapiens ENSP00000258105 89.2857 83.9286 myotis_lucifugus ENSMLUP00000002407 90.0901 84.6847 ENSG00000204822 homo_sapiens ENSP00000258105 73.2143 63.3929 vombatus_ursinus ENSVURP00010026390 80.3922 69.6078 ENSG00000204822 homo_sapiens ENSP00000258105 91.9643 91.0714 rhinolophus_ferrumequinum ENSRFEP00010010765 72.028 71.3287 ENSG00000204822 homo_sapiens ENSP00000258105 92.8571 91.0714 neovison_vison ENSNVIP00000026153 43.5146 42.6778 ENSG00000204822 homo_sapiens ENSP00000258105 93.75 91.9643 bos_taurus ENSBTAP00000022082 93.75 91.9643 ENSG00000204822 homo_sapiens ENSP00000258105 87.5 81.25 heterocephalus_glaber_female ENSHGLP00000046437 87.5 81.25 ENSG00000204822 homo_sapiens ENSP00000258105 96.4286 95.5357 rhinopithecus_bieti ENSRBIP00000002716 96.4286 95.5357 ENSG00000204822 homo_sapiens ENSP00000258105 93.75 91.9643 canis_lupus_dingo ENSCAFP00020017568 93.75 91.9643 ENSG00000204822 homo_sapiens ENSP00000258105 90.1786 87.5 sciurus_vulgaris ENSSVLP00005031427 90.1786 87.5 ENSG00000204822 homo_sapiens ENSP00000258105 74.1071 63.3929 phascolarctos_cinereus ENSPCIP00000007115 77.5701 66.3551 ENSG00000204822 homo_sapiens ENSP00000258105 86.6071 83.0357 procavia_capensis ENSPCAP00000015734 86.6071 83.0357 ENSG00000204822 homo_sapiens ENSP00000258105 90.1786 85.7143 nannospalax_galili ENSNGAP00000001414 87.069 82.7586 ENSG00000204822 homo_sapiens ENSP00000258105 93.75 91.9643 bos_grunniens ENSBGRP00000011377 93.75 91.9643 ENSG00000204822 homo_sapiens ENSP00000258105 91.0714 87.5 chinchilla_lanigera ENSCLAP00000007458 91.0714 87.5 ENSG00000204822 homo_sapiens ENSP00000258105 90.1786 89.2857 cervus_hanglu_yarkandensis ENSCHYP00000011662 90.1786 89.2857 ENSG00000204822 homo_sapiens ENSP00000258105 71.4286 69.6429 catagonus_wagneri ENSCWAP00000022868 66.6667 65 ENSG00000204822 homo_sapiens ENSP00000258105 91.0714 87.5 ictidomys_tridecemlineatus ENSSTOP00000000918 91.0714 87.5 ENSG00000204822 homo_sapiens ENSP00000258105 96.4286 93.75 otolemur_garnettii ENSOGAP00000000945 96.4286 93.75 ENSG00000204822 homo_sapiens ENSP00000258105 97.3214 92.8571 cebus_imitator ENSCCAP00000015895 97.3214 92.8571 ENSG00000204822 homo_sapiens ENSP00000258105 90.1786 87.5 urocitellus_parryii ENSUPAP00010021041 90.1786 87.5 ENSG00000204822 homo_sapiens ENSP00000258105 92.8571 91.9643 moschus_moschiferus ENSMMSP00000019993 92.8571 91.9643 ENSG00000204822 homo_sapiens ENSP00000258105 68.75 61.6071 moschus_moschiferus ENSMMSP00000019767 71.2963 63.8889 ENSG00000204822 homo_sapiens ENSP00000258105 95.5357 94.6429 rhinopithecus_roxellana ENSRROP00000045542 95.5357 94.6429 ENSG00000204822 homo_sapiens ENSP00000258105 87.5 83.0357 mus_pahari MGP_PahariEiJ_P0050589 83.0508 78.8136 ENSG00000204822 homo_sapiens ENSP00000258105 93.75 91.0714 propithecus_coquereli ENSPCOP00000031795 93.75 91.0714
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005739 located_in mitochondrion 1 IDA Homo_sapiens(9606) Component GO:0005743 located_in mitochondrial inner membrane 2 NAS,TAS Homo_sapiens(9606) Component GO:0005762 part_of mitochondrial large ribosomal subunit 3 IBA,IDA,NAS Homo_sapiens(9606) Component GO:0032543 involved_in mitochondrial translation 1 NAS Homo_sapiens(9606) Process
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