Functions and Diseases

RBP Type Canonical_RBPs
Diseases Cancer
Drug N.A.
Main interacting RNAs rRNA
Moonlighting functions N.A.
Localizations N.A.
BulkPerturb-seq N.A.

Description

Ensembl ID ENSG00000204822 Gene ID 116540 Accession 16684
Symbol MRPL53 Alias mL53;L53MT Full Name mitochondrial ribosomal protein L53
Status Confidence Length 706 bases Strand Minus strand
Position 2 : 74471982 - 74472687 RNA binding domain MRP_L53
Summary Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 39S subunit protein. A pseudogene corresponding to this gene is found on chromosome 1p. [provided by RefSeq, Jul 2008]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000258105 MRP_L53 PF10780 1.9e-14 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
MRPL53-201 ENST00000258105 496 112aa ENSP00000258105
MRPL53-202 ENST00000409710 386 70aa ENSP00000386920
MRPL53-203 ENST00000467349 451 No protein -
MRPL53-204 ENST00000468875 574 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000204822

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000204822homo_sapiensENSP0000025810598.214397.3214nomascus_leucogenysENSNLEP0000002755598.214397.3214
ENSG00000204822homo_sapiensENSP0000025810599.107199.1071pan_paniscusENSPPAP0000001344599.107199.1071
ENSG00000204822homo_sapiensENSP0000025810599.107199.1071pan_troglodytesENSPTRP0000006204199.107199.1071
ENSG00000204822homo_sapiensENSP0000025810599.107199.1071gorilla_gorillaENSGGOP0000000636399.107199.1071
ENSG00000204822homo_sapiensENSP0000025810568.7557.1429ornithorhynchus_anatinusENSOANP0000003860734.529128.6996
ENSG00000204822homo_sapiensENSP0000025810576.785766.0714notamacropus_eugeniiENSMEUP0000000813281.132169.8113
ENSG00000204822homo_sapiensENSP0000025810583.928681.25dasypus_novemcinctusENSDNOP0000002738985.454582.7273
ENSG00000204822homo_sapiensENSP0000025810591.964387.5echinops_telfairiENSETEP0000001020091.150486.7257
ENSG00000204822homo_sapiensENSP0000025810597.321491.9643callithrix_jacchusENSCJAP0000005636997.321491.9643
ENSG00000204822homo_sapiensENSP0000025810597.321494.6429cercocebus_atysENSCATP0000000212897.321494.6429
ENSG00000204822homo_sapiensENSP0000025810597.321494.6429macaca_fascicularisENSMFAP0000000598461.931860.2273
ENSG00000204822homo_sapiensENSP0000025810597.321494.6429macaca_mulattaENSMMUP0000007792961.931860.2273
ENSG00000204822homo_sapiensENSP0000025810597.321494.6429macaca_nemestrinaENSMNEP0000003434997.321494.6429
ENSG00000204822homo_sapiensENSP0000025810597.321494.6429papio_anubisENSPANP0000002355997.321494.6429
ENSG00000204822homo_sapiensENSP0000025810596.428693.75mandrillus_leucophaeusENSMLEP0000001592796.428693.75
ENSG00000204822homo_sapiensENSP0000025810594.642993.75tursiops_truncatusENSTTRP0000001206694.642993.75
ENSG00000204822homo_sapiensENSP0000025810593.7591.0714vulpes_vulpesENSVVUP0000000570993.7591.0714
ENSG00000204822homo_sapiensENSP0000025810588.392983.9286mus_spretusMGP_SPRETEiJ_P007741283.898379.661
ENSG00000204822homo_sapiensENSP0000025810593.7590.1786equus_asinusENSEASP0000505445256.756854.5946
ENSG00000204822homo_sapiensENSP000002581057571.4286capra_hircusENSCHIP0000002292677.777874.0741
ENSG00000204822homo_sapiensENSP0000025810586.607184.8214capra_hircusENSCHIP0000002376975.781274.2188
ENSG00000204822homo_sapiensENSP0000025810592.857191.0714capra_hircusENSCHIP0000000530592.857191.0714
ENSG00000204822homo_sapiensENSP0000025810577.678674.1071loxodonta_africanaENSLAFP0000000669987.878883.8384
ENSG00000204822homo_sapiensENSP0000025810592.857191.0714panthera_leoENSPLOP0000000856892.857191.0714
ENSG00000204822homo_sapiensENSP0000025810593.7591.0714ailuropoda_melanoleucaENSAMEP0000001820693.7591.0714
ENSG00000204822homo_sapiensENSP0000025810594.642989.2857oryctolagus_cuniculusENSOCUP0000001317893.805388.4956
ENSG00000204822homo_sapiensENSP0000025810583.928679.4643oryctolagus_cuniculusENSOCUP0000004577385.454580.9091
ENSG00000204822homo_sapiensENSP0000025810592.857191.0714panthera_pardusENSPPRP0000001546792.857191.0714
ENSG00000204822homo_sapiensENSP0000025810589.285785.7143marmota_marmota_marmotaENSMMMP0000000453089.285785.7143
ENSG00000204822homo_sapiensENSP0000025810591.071487.5marmota_marmota_marmotaENSMMMP0000000517591.071487.5
ENSG00000204822homo_sapiensENSP0000025810593.7591.9643balaenoptera_musculusENSBMSP0001001790393.7591.9643
ENSG00000204822homo_sapiensENSP0000025810589.285783.9286cavia_porcellusENSCPOP0000002313789.285783.9286
ENSG00000204822homo_sapiensENSP0000025810592.857191.0714felis_catusENSFCAP0000002904692.857191.0714
ENSG00000204822homo_sapiensENSP0000025810572.321467.8571ursus_americanusENSUAMP0000002808667.563.3333
ENSG00000204822homo_sapiensENSP0000025810593.7591.0714bison_bison_bisonENSBBBP0000001293693.7591.0714
ENSG00000204822homo_sapiensENSP0000025810593.7592.8571monodon_monocerosENSMMNP0001501058193.7592.8571
ENSG00000204822homo_sapiensENSP0000025810594.642991.9643microcebus_murinusENSMICP0000004917894.642991.9643
ENSG00000204822homo_sapiensENSP0000025810589.285783.9286jaculus_jaculusENSJJAP0000000712889.285783.9286
ENSG00000204822homo_sapiensENSP0000025810592.857191.9643ovis_aries_rambouilletENSOARP0002000219992.857191.9643
ENSG00000204822homo_sapiensENSP0000025810572.321467.8571ursus_maritimusENSUMAP0000000170267.563.3333
ENSG00000204822homo_sapiensENSP0000025810588.392983.9286mus_caroliMGP_CAROLIEiJ_P007451883.898379.661
ENSG00000204822homo_sapiensENSP0000025810588.392983.9286mus_musculusENSMUSP0000010957183.898379.661
ENSG00000204822homo_sapiensENSP0000025810592.857191.0714mustela_putorius_furoENSMPUP0000000799792.857191.0714
ENSG00000204822homo_sapiensENSP0000025810597.321491.9643aotus_nancymaaeENSANAP0000002895397.321491.9643
ENSG00000204822homo_sapiensENSP0000025810596.428691.9643saimiri_boliviensis_boliviensisENSSBOP0000002073996.428691.9643
ENSG00000204822homo_sapiensENSP0000025810597.321495.5357chlorocebus_sabaeusENSCSAP0000001170097.321495.5357
ENSG00000204822homo_sapiensENSP0000025810585.714383.0357tupaia_belangeriENSTBEP0000001538294.117691.1765
ENSG00000204822homo_sapiensENSP0000025810591.964386.6071mesocricetus_auratusENSMAUP0000000946486.554681.5126
ENSG00000204822homo_sapiensENSP0000025810594.642993.75phocoena_sinusENSPSNP0000002046994.642993.75
ENSG00000204822homo_sapiensENSP0000025810593.7591.0714camelus_dromedariusENSCDRP0000500912173.943771.831
ENSG00000204822homo_sapiensENSP0000025810593.7592.8571carlito_syrichtaENSTSYP0000002072193.7592.8571
ENSG00000204822homo_sapiensENSP0000025810582.142976.7857carlito_syrichtaENSTSYP0000001851771.87567.1875
ENSG00000204822homo_sapiensENSP0000025810591.964391.0714panthera_tigris_altaicaENSPTIP0000001111891.964391.0714
ENSG00000204822homo_sapiensENSP0000025810594.642992.8571prolemur_simusENSPSMP0000002930594.642992.8571
ENSG00000204822homo_sapiensENSP0000025810592.857187.5microtus_ochrogasterENSMOCP0000001619688.135683.0508
ENSG00000204822homo_sapiensENSP0000025810590.178684.8214sorex_araneusENSSARP0000000964189.380584.0708
ENSG00000204822homo_sapiensENSP0000025810590.178684.8214peromyscus_maniculatus_bairdiiENSPEMP0000000652983.471178.5124
ENSG00000204822homo_sapiensENSP0000025810574.107170.5357bos_mutusENSBMUP0000001710954.605351.9737
ENSG00000204822homo_sapiensENSP0000025810588.392983.9286mus_spicilegusENSMSIP0000003791283.898379.661
ENSG00000204822homo_sapiensENSP0000025810589.285782.1429cricetulus_griseus_chok1gshdENSCGRP0000101074484.033677.3109
ENSG00000204822homo_sapiensENSP0000025810593.7590.1786pteropus_vampyrusENSPVAP0000001316293.7590.1786
ENSG00000204822homo_sapiensENSP0000025810589.285783.9286myotis_lucifugusENSMLUP0000000240790.090184.6847
ENSG00000204822homo_sapiensENSP0000025810573.214363.3929vombatus_ursinusENSVURP0001002639080.392269.6078
ENSG00000204822homo_sapiensENSP0000025810591.964391.0714rhinolophus_ferrumequinumENSRFEP0001001076572.02871.3287
ENSG00000204822homo_sapiensENSP0000025810592.857191.0714neovison_visonENSNVIP0000002615343.514642.6778
ENSG00000204822homo_sapiensENSP0000025810593.7591.9643bos_taurusENSBTAP0000002208293.7591.9643
ENSG00000204822homo_sapiensENSP0000025810587.581.25heterocephalus_glaber_femaleENSHGLP0000004643787.581.25
ENSG00000204822homo_sapiensENSP0000025810596.428695.5357rhinopithecus_bietiENSRBIP0000000271696.428695.5357
ENSG00000204822homo_sapiensENSP0000025810593.7591.9643canis_lupus_dingoENSCAFP0002001756893.7591.9643
ENSG00000204822homo_sapiensENSP0000025810590.178687.5sciurus_vulgarisENSSVLP0000503142790.178687.5
ENSG00000204822homo_sapiensENSP0000025810574.107163.3929phascolarctos_cinereusENSPCIP0000000711577.570166.3551
ENSG00000204822homo_sapiensENSP0000025810586.607183.0357procavia_capensisENSPCAP0000001573486.607183.0357
ENSG00000204822homo_sapiensENSP0000025810590.178685.7143nannospalax_galiliENSNGAP0000000141487.06982.7586
ENSG00000204822homo_sapiensENSP0000025810593.7591.9643bos_grunniensENSBGRP0000001137793.7591.9643
ENSG00000204822homo_sapiensENSP0000025810591.071487.5chinchilla_lanigeraENSCLAP0000000745891.071487.5
ENSG00000204822homo_sapiensENSP0000025810590.178689.2857cervus_hanglu_yarkandensisENSCHYP0000001166290.178689.2857
ENSG00000204822homo_sapiensENSP0000025810571.428669.6429catagonus_wagneriENSCWAP0000002286866.666765
ENSG00000204822homo_sapiensENSP0000025810591.071487.5ictidomys_tridecemlineatusENSSTOP0000000091891.071487.5
ENSG00000204822homo_sapiensENSP0000025810596.428693.75otolemur_garnettiiENSOGAP0000000094596.428693.75
ENSG00000204822homo_sapiensENSP0000025810597.321492.8571cebus_imitatorENSCCAP0000001589597.321492.8571
ENSG00000204822homo_sapiensENSP0000025810590.178687.5urocitellus_parryiiENSUPAP0001002104190.178687.5
ENSG00000204822homo_sapiensENSP0000025810592.857191.9643moschus_moschiferusENSMMSP0000001999392.857191.9643
ENSG00000204822homo_sapiensENSP0000025810568.7561.6071moschus_moschiferusENSMMSP0000001976771.296363.8889
ENSG00000204822homo_sapiensENSP0000025810595.535794.6429rhinopithecus_roxellanaENSRROP0000004554295.535794.6429
ENSG00000204822homo_sapiensENSP0000025810587.583.0357mus_pahariMGP_PahariEiJ_P005058983.050878.8136
ENSG00000204822homo_sapiensENSP0000025810593.7591.0714propithecus_coquereliENSPCOP0000003179593.7591.0714

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005739located_in mitochondrion1IDAHomo_sapiens(9606)Component
GO:0005743located_in mitochondrial inner membrane2NAS,TASHomo_sapiens(9606)Component
GO:0005762part_of mitochondrial large ribosomal subunit3IBA,IDA,NASHomo_sapiens(9606)Component
GO:0032543involved_in mitochondrial translation1NASHomo_sapiens(9606)Process

Expression