RBPWorld - a comprehensive database of RNA Binding Proteins

Functions and Diseases

RBP Type	Non-canonical_RBPs
Diseases	Cancer Disease
Drug	N.A.
Main interacting RNAs	ncRNA
Moonlighting functions	TF
Localizations	N.A.
BulkPerturb-seq	N.A.

Description

Ensembl ID	ENSG00000170365	Gene ID	4086	Accession	6767
Symbol	SMAD1	Alias	BSP1;JV41;BSP-1;JV4-1;MADH1;MADR1	Full Name	SMAD family member 1
Status	Confidence	Length	77983 bases	Strand	Plus strand
Position	4 : 145481194 - 145559176	RNA binding domain	N.A.
Summary	The protein encoded by this gene belongs to the SMAD, a family of proteins similar to the gene products of the Drosophila gene 'mothers against decapentaplegic' (Mad) and the C. elegans gene Sma. SMAD proteins are signal transducers and transcriptional modulators that mediate multiple signaling pathways. This protein mediates the signals of the bone morphogenetic proteins (BMPs), which are involved in a range of biological activities including cell growth, apoptosis, morphogenesis, development and immune responses. In response to BMP ligands, this protein can be phosphorylated and activated by the BMP receptor kinase. The phosphorylated form of this protein forms a complex with SMAD4, which is important for its function in the transcription regulation. This protein is a target for SMAD-specific E3 ubiquitin ligases, such as SMURF1 and SMURF2, and undergoes ubiquitination and proteasome-mediated degradation. Alternatively spliced transcript variants encoding the same protein have been observed. [provided by RefSeq, Jul 2008]

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
SMAD1-213	ENST00000514778	616	106aa	ENSP00000424959
SMAD1-207	ENST00000507594	558	95aa	ENSP00000424649
SMAD1-214	ENST00000514831	569	112aa	ENSP00000425270
SMAD1-201	ENST00000302085	3002	465aa	ENSP00000305769
SMAD1-211	ENST00000512019	847	133aa	ENSP00000427002
SMAD1-204	ENST00000503324	573	58aa	ENSP00000422706
SMAD1-216	ENST00000515527	632	No protein	-
SMAD1-206	ENST00000507367	421	10aa	ENSP00000421601
SMAD1-202	ENST00000394092	1658	465aa	ENSP00000377652
SMAD1-215	ENST00000515385	2085	465aa	ENSP00000426568
SMAD1-212	ENST00000514168	548	No protein	-
SMAD1-205	ENST00000506626	518	No protein	-
SMAD1-203	ENST00000502342	262	No protein	-
SMAD1-209	ENST00000511125	3293	No protein	-
SMAD1-208	ENST00000510948	569	No protein	-
SMAD1-210	ENST00000511255	539	No protein	-

Gene Model

Click here to download ENSG00000170365's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID
59545	Blood Pressure	1.8857609E-005	-

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSG00000170365's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSG00000170365	homo_sapiens	ENSP00000369154	87.5803	80.7281	homo_sapiens	ENSP00000305769	87.957	81.0753
ENSG00000170365	homo_sapiens	ENSP00000262160	71.3062	60.5996	homo_sapiens	ENSP00000305769	71.6129	60.8602
ENSG00000170365	homo_sapiens	ENSP00000332973	77.6471	66.8235	homo_sapiens	ENSP00000305769	70.9677	61.0753
ENSG00000170365	homo_sapiens	ENSP00000441954	93.1183	89.8925	homo_sapiens	ENSP00000305769	93.1183	89.8925
ENSG00000170365	homo_sapiens	ENSP00000288840	36.0887	25.2016	homo_sapiens	ENSP00000305769	38.4946	26.8817
ENSG00000170365	homo_sapiens	ENSP00000341551	46.3768	33.1522	homo_sapiens	ENSP00000305769	55.0538	39.3548
ENSG00000170365	homo_sapiens	ENSP00000262158	40.1408	26.7606	homo_sapiens	ENSP00000305769	36.7742	24.5161

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSG00000170365	homo_sapiens	ENSP00000305769	100	99.7849	nomascus_leucogenys	ENSNLEP00000006702	100	99.7849
ENSG00000170365	homo_sapiens	ENSP00000305769	100	99.7849	pan_paniscus	ENSPPAP00000008727	100	99.7849
ENSG00000170365	homo_sapiens	ENSP00000305769	100	99.7849	pongo_abelii	ENSPPYP00000027044	99.7854	99.5708
ENSG00000170365	homo_sapiens	ENSP00000305769	99.1398	98.9247	pan_troglodytes	ENSPTRP00000028297	98.2942	98.081
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.7849	gorilla_gorilla	ENSGGOP00000025615	99.7849	99.7849
ENSG00000170365	homo_sapiens	ENSP00000305769	98.7097	98.2796	ornithorhynchus_anatinus	ENSOANP00000050639	98.7097	98.2796
ENSG00000170365	homo_sapiens	ENSP00000305769	99.3548	99.1398	sarcophilus_harrisii	ENSSHAP00000007345	99.3548	99.1398
ENSG00000170365	homo_sapiens	ENSP00000305769	67.5269	66.8817	notamacropus_eugenii	ENSMEUP00000005779	99.0536	98.1073
ENSG00000170365	homo_sapiens	ENSP00000305769	84.5161	84.5161	choloepus_hoffmanni	ENSCHOP00000008190	90.7621	90.7621
ENSG00000170365	homo_sapiens	ENSP00000305769	99.3548	98.2796	dasypus_novemcinctus	ENSDNOP00000024750	96.25	95.2083
ENSG00000170365	homo_sapiens	ENSP00000305769	99.3548	98.9247	erinaceus_europaeus	ENSEEUP00000007622	99.569	99.1379
ENSG00000170365	homo_sapiens	ENSP00000305769	81.7204	80.2151	echinops_telfairi	ENSETEP00000013415	84.4444	82.8889
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.7849	callithrix_jacchus	ENSCJAP00000004640	99.5708	99.5708
ENSG00000170365	homo_sapiens	ENSP00000305769	100	100	cercocebus_atys	ENSCATP00000035595	100	100
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.7849	macaca_fascicularis	ENSMFAP00000037045	99.7849	99.7849
ENSG00000170365	homo_sapiens	ENSP00000305769	100	100	macaca_mulatta	ENSMMUP00000024174	100	100
ENSG00000170365	homo_sapiens	ENSP00000305769	100	100	macaca_nemestrina	ENSMNEP00000006142	100	100
ENSG00000170365	homo_sapiens	ENSP00000305769	100	100	papio_anubis	ENSPANP00000015391	100	100
ENSG00000170365	homo_sapiens	ENSP00000305769	100	100	mandrillus_leucophaeus	ENSMLEP00000019537	100	100
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	98.9247	tursiops_truncatus	ENSTTRP00000007646	99.7849	98.9247
ENSG00000170365	homo_sapiens	ENSP00000305769	99.5699	99.3548	vulpes_vulpes	ENSVVUP00000012542	99.5699	99.3548
ENSG00000170365	homo_sapiens	ENSP00000305769	99.5699	99.1398	mus_spretus	MGP_SPRETEiJ_P0088599	99.5699	99.1398
ENSG00000170365	homo_sapiens	ENSP00000305769	99.5699	99.5699	equus_asinus	ENSEASP00005001994	99.5699	99.5699
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.7849	capra_hircus	ENSCHIP00000007984	99.7849	99.7849
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.5699	loxodonta_africana	ENSLAFP00000015374	99.7849	99.5699
ENSG00000170365	homo_sapiens	ENSP00000305769	99.5699	99.3548	panthera_leo	ENSPLOP00000016696	99.5699	99.3548
ENSG00000170365	homo_sapiens	ENSP00000305769	99.5699	99.3548	ailuropoda_melanoleuca	ENSAMEP00000017583	99.5699	99.3548
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.7849	bos_indicus_hybrid	ENSBIXP00005002254	99.7849	99.7849
ENSG00000170365	homo_sapiens	ENSP00000305769	98.4946	97.6344	oryctolagus_cuniculus	ENSOCUP00000034294	98.4946	97.6344
ENSG00000170365	homo_sapiens	ENSP00000305769	99.5699	99.5699	equus_caballus	ENSECAP00000020355	99.5699	99.5699
ENSG00000170365	homo_sapiens	ENSP00000305769	99.5699	99.3548	canis_lupus_familiaris	ENSCAFP00845016920	99.5699	99.3548
ENSG00000170365	homo_sapiens	ENSP00000305769	99.5699	99.3548	panthera_pardus	ENSPPRP00000000815	99.5699	99.3548
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.7849	marmota_marmota_marmota	ENSMMMP00000001670	99.7849	99.7849
ENSG00000170365	homo_sapiens	ENSP00000305769	99.5699	99.3548	balaenoptera_musculus	ENSBMSP00010003535	99.5699	99.3548
ENSG00000170365	homo_sapiens	ENSP00000305769	98.9247	98.9247	cavia_porcellus	ENSCPOP00000008146	98.9247	98.9247
ENSG00000170365	homo_sapiens	ENSP00000305769	99.5699	99.3548	felis_catus	ENSFCAP00000003810	99.5699	99.3548
ENSG00000170365	homo_sapiens	ENSP00000305769	33.3333	32.043	ursus_americanus	ENSUAMP00000000756	91.1765	87.6471
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.3548	monodelphis_domestica	ENSMODP00000000595	99.7849	99.3548
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.7849	bison_bison_bison	ENSBBBP00000012990	99.7849	99.7849
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.3548	monodon_monoceros	ENSMMNP00015022735	99.7849	99.3548
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.7849	sus_scrofa	ENSSSCP00000032660	99.7849	99.7849
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.5699	microcebus_murinus	ENSMICP00000016589	99.7849	99.5699
ENSG00000170365	homo_sapiens	ENSP00000305769	98.9247	98.7097	octodon_degus	ENSODEP00000002947	98.9247	98.7097
ENSG00000170365	homo_sapiens	ENSP00000305769	89.4624	88.6021	jaculus_jaculus	ENSJJAP00000016064	96.9697	96.0373
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.7849	jaculus_jaculus	ENSJJAP00000017648	99.7849	99.7849
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.7849	ovis_aries_rambouillet	ENSOARP00020032306	99.7849	99.7849
ENSG00000170365	homo_sapiens	ENSP00000305769	99.5699	99.3548	ursus_maritimus	ENSUMAP00000021317	99.5699	99.3548
ENSG00000170365	homo_sapiens	ENSP00000305769	87.3118	86.8817	ochotona_princeps	ENSOPRP00000011656	99.0244	98.5366
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.3548	delphinapterus_leucas	ENSDLEP00000022008	99.7849	99.3548
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.1398	physeter_catodon	ENSPCTP00005002377	99.7849	99.1398
ENSG00000170365	homo_sapiens	ENSP00000305769	99.5699	99.1398	mus_caroli	MGP_CAROLIEiJ_P0085091	99.5699	99.1398
ENSG00000170365	homo_sapiens	ENSP00000305769	99.5699	99.1398	mus_musculus	ENSMUSP00000071035	99.5699	99.1398
ENSG00000170365	homo_sapiens	ENSP00000305769	99.3548	98.7097	dipodomys_ordii	ENSDORP00000007570	99.3548	98.7097
ENSG00000170365	homo_sapiens	ENSP00000305769	99.5699	99.3548	mustela_putorius_furo	ENSMPUP00000006812	99.5699	99.3548
ENSG00000170365	homo_sapiens	ENSP00000305769	100	99.7849	aotus_nancymaae	ENSANAP00000036845	100	99.7849
ENSG00000170365	homo_sapiens	ENSP00000305769	100	100	saimiri_boliviensis_boliviensis	ENSSBOP00000032926	100	100
ENSG00000170365	homo_sapiens	ENSP00000305769	77.4194	76.5591	vicugna_pacos	ENSVPAP00000003091	99.1736	98.0716
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.7849	chlorocebus_sabaeus	ENSCSAP00000014620	99.7849	99.7849
ENSG00000170365	homo_sapiens	ENSP00000305769	71.1828	71.1828	tupaia_belangeri	ENSTBEP00000014295	99.6988	99.6988
ENSG00000170365	homo_sapiens	ENSP00000305769	99.3548	99.1398	mesocricetus_auratus	ENSMAUP00000022781	99.3548	99.1398
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.3548	phocoena_sinus	ENSPSNP00000019437	99.7849	99.3548
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.3548	camelus_dromedarius	ENSCDRP00005000014	99.7849	99.3548
ENSG00000170365	homo_sapiens	ENSP00000305769	100	99.7849	carlito_syrichta	ENSTSYP00000014067	100	99.7849
ENSG00000170365	homo_sapiens	ENSP00000305769	99.5699	99.3548	panthera_tigris_altaica	ENSPTIP00000023982	99.5699	99.3548
ENSG00000170365	homo_sapiens	ENSP00000305769	99.1398	98.7097	rattus_norvegicus	ENSRNOP00000025079	95.4451	95.0311
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.7849	prolemur_simus	ENSPSMP00000024939	99.5708	99.5708
ENSG00000170365	homo_sapiens	ENSP00000305769	99.3548	98.7097	microtus_ochrogaster	ENSMOCP00000003534	99.3548	98.7097
ENSG00000170365	homo_sapiens	ENSP00000305769	61.7204	61.0753	sorex_araneus	ENSSARP00000002397	86.9697	86.0606
ENSG00000170365	homo_sapiens	ENSP00000305769	99.5699	99.1398	peromyscus_maniculatus_bairdii	ENSPEMP00000020453	99.5699	99.1398
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.7849	bos_mutus	ENSBMUP00000008146	99.7849	99.7849
ENSG00000170365	homo_sapiens	ENSP00000305769	99.5699	99.1398	mus_spicilegus	ENSMSIP00000035112	99.5699	99.1398
ENSG00000170365	homo_sapiens	ENSP00000305769	92.043	90.9677	cricetulus_griseus_chok1gshd	ENSCGRP00001005065	91.8455	90.7725
ENSG00000170365	homo_sapiens	ENSP00000305769	39.5699	37.2043	cricetulus_griseus_chok1gshd	ENSCGRP00001010492	92.4623	86.9347
ENSG00000170365	homo_sapiens	ENSP00000305769	30.7527	29.2473	cricetulus_griseus_chok1gshd	ENSCGRP00001011383	91.6667	87.1795
ENSG00000170365	homo_sapiens	ENSP00000305769	76.9893	73.3333	cricetulus_griseus_chok1gshd	ENSCGRP00001001697	93.2292	88.8021
ENSG00000170365	homo_sapiens	ENSP00000305769	20	18.9247	cricetulus_griseus_chok1gshd	ENSCGRP00001001987	90.2913	85.4369
ENSG00000170365	homo_sapiens	ENSP00000305769	46.8817	44.086	cricetulus_griseus_chok1gshd	ENSCGRP00001010406	81.0409	76.2082
ENSG00000170365	homo_sapiens	ENSP00000305769	99.3548	98.9247	pteropus_vampyrus	ENSPVAP00000013475	99.3548	98.9247
ENSG00000170365	homo_sapiens	ENSP00000305769	99.5699	99.5699	myotis_lucifugus	ENSMLUP00000011168	99.5699	99.5699
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.3548	vombatus_ursinus	ENSVURP00010013606	99.7849	99.3548
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.5699	rhinolophus_ferrumequinum	ENSRFEP00010021964	99.7849	99.5699
ENSG00000170365	homo_sapiens	ENSP00000305769	99.5699	99.3548	neovison_vison	ENSNVIP00000010807	99.5699	99.3548
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.7849	bos_taurus	ENSBTAP00000074456	99.7849	99.7849
ENSG00000170365	homo_sapiens	ENSP00000305769	45.8064	44.086	heterocephalus_glaber_female	ENSHGLP00000047985	91.0256	87.6068
ENSG00000170365	homo_sapiens	ENSP00000305769	45.5914	43.4409	heterocephalus_glaber_female	ENSHGLP00000043495	90.5983	86.3248
ENSG00000170365	homo_sapiens	ENSP00000305769	84.9462	81.7204	heterocephalus_glaber_female	ENSHGLP00000024929	94.9519	91.3462
ENSG00000170365	homo_sapiens	ENSP00000305769	84.7312	83.4409	heterocephalus_glaber_female	ENSHGLP00000010532	95.1691	93.7198
ENSG00000170365	homo_sapiens	ENSP00000305769	99.5699	99.3548	heterocephalus_glaber_female	ENSHGLP00000000232	99.5699	99.3548
ENSG00000170365	homo_sapiens	ENSP00000305769	100	100	rhinopithecus_bieti	ENSRBIP00000016921	100	100
ENSG00000170365	homo_sapiens	ENSP00000305769	99.5699	99.3548	canis_lupus_dingo	ENSCAFP00020033282	99.5699	99.3548
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.5699	sciurus_vulgaris	ENSSVLP00005012098	99.7849	99.5699
ENSG00000170365	homo_sapiens	ENSP00000305769	95.2688	90.1075	sciurus_vulgaris	ENSSVLP00005013302	95.8874	90.6926
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.3548	phascolarctos_cinereus	ENSPCIP00000017700	99.7849	99.3548
ENSG00000170365	homo_sapiens	ENSP00000305769	64.7312	64.7312	procavia_capensis	ENSPCAP00000008520	65.2928	65.2928
ENSG00000170365	homo_sapiens	ENSP00000305769	99.3548	99.1398	nannospalax_galili	ENSNGAP00000008454	99.3548	99.1398
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.7849	bos_grunniens	ENSBGRP00000012173	99.7849	99.7849
ENSG00000170365	homo_sapiens	ENSP00000305769	99.1398	98.9247	chinchilla_lanigera	ENSCLAP00000007019	99.1398	98.9247
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.7849	cervus_hanglu_yarkandensis	ENSCHYP00000002062	99.7849	99.7849
ENSG00000170365	homo_sapiens	ENSP00000305769	99.5699	98.9247	catagonus_wagneri	ENSCWAP00000013026	99.5699	98.9247
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.7849	ictidomys_tridecemlineatus	ENSSTOP00000009717	99.7849	99.7849
ENSG00000170365	homo_sapiens	ENSP00000305769	99.3548	99.1398	otolemur_garnettii	ENSOGAP00000000133	99.3548	99.1398
ENSG00000170365	homo_sapiens	ENSP00000305769	100	100	cebus_imitator	ENSCCAP00000027710	100	100
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.5699	urocitellus_parryii	ENSUPAP00010000555	99.7849	99.5699
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.7849	moschus_moschiferus	ENSMMSP00000014275	99.7849	99.7849
ENSG00000170365	homo_sapiens	ENSP00000305769	100	100	rhinopithecus_roxellana	ENSRROP00000038071	100	100
ENSG00000170365	homo_sapiens	ENSP00000305769	99.5699	99.1398	mus_pahari	MGP_PahariEiJ_P0053396	99.5699	99.1398
ENSG00000170365	homo_sapiens	ENSP00000305769	99.7849	99.7849	propithecus_coquereli	ENSPCOP00000005479	99.7849	99.7849
ENSG00000170365	homo_sapiens	ENSP00000305769	28.8172	27.0968	ciona_intestinalis	ENSCINP00000030274	92.4138	86.8966
ENSG00000170365	homo_sapiens	ENSP00000305769	34.4086	31.1828	callorhinchus_milii	ENSCMIP00000045389	80.402	72.8643
ENSG00000170365	homo_sapiens	ENSP00000305769	98.0645	97.2043	latimeria_chalumnae	ENSLACP00000012771	98.0645	97.2043
ENSG00000170365	homo_sapiens	ENSP00000305769	96.3441	93.1183	lepisosteus_oculatus	ENSLOCP00000010808	95.7265	92.5214
ENSG00000170365	homo_sapiens	ENSP00000305769	94.1936	89.6774	clupea_harengus	ENSCHAP00000041440	82.6415	78.6792
ENSG00000170365	homo_sapiens	ENSP00000305769	94.8387	89.6774	danio_rerio	ENSDARP00000030150	93.4322	88.3475
ENSG00000170365	homo_sapiens	ENSP00000305769	94.4086	89.0323	carassius_auratus	ENSCARP00000086568	93.0085	87.7119
ENSG00000170365	homo_sapiens	ENSP00000305769	94.1936	89.0323	carassius_auratus	ENSCARP00000051165	92.7966	87.7119
ENSG00000170365	homo_sapiens	ENSP00000305769	88.6021	81.0753	astyanax_mexicanus	ENSAMXP00000040326	84.4262	77.2541
ENSG00000170365	homo_sapiens	ENSP00000305769	94.8387	89.2473	ictalurus_punctatus	ENSIPUP00000006761	93.4322	87.9237
ENSG00000170365	homo_sapiens	ENSP00000305769	94.8387	89.6774	esox_lucius	ENSELUP00000014417	93.2347	88.1607
ENSG00000170365	homo_sapiens	ENSP00000305769	91.1828	85.3763	esox_lucius	ENSELUP00000006129	89.4515	83.7553
ENSG00000170365	homo_sapiens	ENSP00000305769	69.8925	62.5806	electrophorus_electricus	ENSEEEP00000012830	73.1982	65.5405
ENSG00000170365	homo_sapiens	ENSP00000305769	95.2688	90.9677	oncorhynchus_kisutch	ENSOKIP00005007630	92.0998	87.9418
ENSG00000170365	homo_sapiens	ENSP00000305769	95.2688	90.9677	oncorhynchus_kisutch	ENSOKIP00005063438	85.6867	81.8182
ENSG00000170365	homo_sapiens	ENSP00000305769	95.2688	90.9677	oncorhynchus_mykiss	ENSOMYP00000024703	79.6763	76.0791
ENSG00000170365	homo_sapiens	ENSP00000305769	90.5376	83.871	oncorhynchus_mykiss	ENSOMYP00000115329	88.8186	82.2785
ENSG00000170365	homo_sapiens	ENSP00000305769	95.2688	90.9677	oncorhynchus_mykiss	ENSOMYP00000024654	92.0998	87.9418
ENSG00000170365	homo_sapiens	ENSP00000305769	90.5376	83.6559	salmo_salar	ENSSSAP00000041034	86.9835	80.3719
ENSG00000170365	homo_sapiens	ENSP00000305769	95.2688	90.9677	salmo_salar	ENSSSAP00000103653	92.0998	87.9418
ENSG00000170365	homo_sapiens	ENSP00000305769	95.2688	90.9677	salmo_salar	ENSSSAP00000124848	74.8311	71.4527
ENSG00000170365	homo_sapiens	ENSP00000305769	95.2688	90.9677	salmo_trutta	ENSSTUP00000002516	92.0998	87.9418
ENSG00000170365	homo_sapiens	ENSP00000305769	95.4839	90.9677	salmo_trutta	ENSSTUP00000025371	92.3077	87.9418
ENSG00000170365	homo_sapiens	ENSP00000305769	90.9677	84.086	salmo_trutta	ENSSTUP00000002136	89.2405	82.4894
ENSG00000170365	homo_sapiens	ENSP00000305769	95.0538	90.1075	gadus_morhua	ENSGMOP00000066045	92.2756	87.4739
ENSG00000170365	homo_sapiens	ENSP00000305769	87.7419	78.2796	gadus_morhua	ENSGMOP00000025168	86.4407	77.1186
ENSG00000170365	homo_sapiens	ENSP00000305769	95.4839	90.3226	fundulus_heteroclitus	ENSFHEP00000006796	90.9836	86.0656
ENSG00000170365	homo_sapiens	ENSP00000305769	95.2688	89.6774	poecilia_reticulata	ENSPREP00000034328	94.8608	89.2934
ENSG00000170365	homo_sapiens	ENSP00000305769	95.2688	89.6774	xiphophorus_maculatus	ENSXMAP00000032082	89.3145	84.0726
ENSG00000170365	homo_sapiens	ENSP00000305769	95.0538	90.1075	oryzias_latipes	ENSORLP00000009247	93.8429	88.9597
ENSG00000170365	homo_sapiens	ENSP00000305769	94.8387	89.6774	cyclopterus_lumpus	ENSCLMP00005009067	93.8298	88.7234
ENSG00000170365	homo_sapiens	ENSP00000305769	95.4839	90.7527	oreochromis_niloticus	ENSONIP00000012577	94.8718	90.1709
ENSG00000170365	homo_sapiens	ENSP00000305769	95.6989	90.9677	haplochromis_burtoni	ENSHBUP00000026095	95.2891	90.5782
ENSG00000170365	homo_sapiens	ENSP00000305769	95.6989	90.9677	astatotilapia_calliptera	ENSACLP00000037795	95.2891	90.5782
ENSG00000170365	homo_sapiens	ENSP00000305769	96.129	91.1828	sparus_aurata	ENSSAUP00010017598	95.1064	90.2128
ENSG00000170365	homo_sapiens	ENSP00000305769	94.6237	89.8925	lates_calcarifer	ENSLCAP00010041718	95.2381	90.4762
ENSG00000170365	homo_sapiens	ENSP00000305769	97.6344	95.914	xenopus_tropicalis	ENSXETP00000051117	97.8448	96.1207
ENSG00000170365	homo_sapiens	ENSP00000305769	98.9247	98.4946	chrysemys_picta_bellii	ENSCPBP00000039938	98.9247	98.4946
ENSG00000170365	homo_sapiens	ENSP00000305769	98.4946	98.0645	sphenodon_punctatus	ENSSPUP00000011361	98.4946	98.0645
ENSG00000170365	homo_sapiens	ENSP00000305769	98.7097	98.4946	crocodylus_porosus	ENSCPRP00005012042	98.7097	98.4946
ENSG00000170365	homo_sapiens	ENSP00000305769	63.4409	62.7957	laticauda_laticaudata	ENSLLTP00000025001	98.3333	97.3333
ENSG00000170365	homo_sapiens	ENSP00000305769	98.9247	98.0645	notechis_scutatus	ENSNSUP00000006234	98.9247	98.0645
ENSG00000170365	homo_sapiens	ENSP00000305769	98.9247	98.0645	pseudonaja_textilis	ENSPTXP00000014662	98.9247	98.0645
ENSG00000170365	homo_sapiens	ENSP00000305769	98.2796	97.2043	anas_platyrhynchos_platyrhynchos	ENSAPLP00000011896	98.2796	97.2043
ENSG00000170365	homo_sapiens	ENSP00000305769	98.2796	97.2043	gallus_gallus	ENSGALP00010008962	98.2796	97.2043
ENSG00000170365	homo_sapiens	ENSP00000305769	98.2796	96.7742	meleagris_gallopavo	ENSMGAP00000003487	98.2796	96.7742
ENSG00000170365	homo_sapiens	ENSP00000305769	98.4946	96.7742	serinus_canaria	ENSSCAP00000020861	98.4946	96.7742
ENSG00000170365	homo_sapiens	ENSP00000305769	98.4946	96.9893	parus_major	ENSPMJP00000011386	98.4946	96.9893
ENSG00000170365	homo_sapiens	ENSP00000305769	98.4946	97.6344	anolis_carolinensis	ENSACAP00000003474	98.4946	97.6344
ENSG00000170365	homo_sapiens	ENSP00000305769	95.6989	90.9677	neolamprologus_brichardi	ENSNBRP00000005943	95.2891	90.5782
ENSG00000170365	homo_sapiens	ENSP00000305769	98.9247	98.2796	naja_naja	ENSNNAP00000016009	98.9247	98.2796
ENSG00000170365	homo_sapiens	ENSP00000305769	98.0645	97.4194	podarcis_muralis	ENSPMRP00000020481	98.4881	97.8402
ENSG00000170365	homo_sapiens	ENSP00000305769	98.2796	96.5591	geospiza_fortis	ENSGFOP00000012996	98.2796	96.5591
ENSG00000170365	homo_sapiens	ENSP00000305769	98.2796	96.7742	taeniopygia_guttata	ENSTGUP00000002759	98.2796	96.7742
ENSG00000170365	homo_sapiens	ENSP00000305769	97.6344	94.4086	erpetoichthys_calabaricus	ENSECRP00000001846	96.3907	93.2059
ENSG00000170365	homo_sapiens	ENSP00000305769	94.4086	89.2473	kryptolebias_marmoratus	ENSKMAP00000005319	94.0043	88.8651
ENSG00000170365	homo_sapiens	ENSP00000305769	98.4946	98.0645	salvator_merianae	ENSSMRP00000000306	98.4946	98.0645
ENSG00000170365	homo_sapiens	ENSP00000305769	93.5484	88.6021	oryzias_javanicus	ENSOJAP00000046263	94.1558	89.1775
ENSG00000170365	homo_sapiens	ENSP00000305769	95.6989	90.9677	amphilophus_citrinellus	ENSACIP00000021648	95.2891	90.5782
ENSG00000170365	homo_sapiens	ENSP00000305769	95.914	90.9677	dicentrarchus_labrax	ENSDLAP00005040903	95.0959	90.1919
ENSG00000170365	homo_sapiens	ENSP00000305769	95.914	90.9677	amphiprion_percula	ENSAPEP00000033891	95.5032	90.5782
ENSG00000170365	homo_sapiens	ENSP00000305769	95.2688	90.3226	oryzias_sinensis	ENSOSIP00000042333	94.0552	89.172
ENSG00000170365	homo_sapiens	ENSP00000305769	88.6021	88.3871	pelodiscus_sinensis	ENSPSIP00000018548	96.4871	96.2529
ENSG00000170365	homo_sapiens	ENSP00000305769	97.4194	97.2043	gopherus_evgoodei	ENSGEVP00005024014	95.9746	95.7627
ENSG00000170365	homo_sapiens	ENSP00000305769	98.9247	98.7097	chelonoidis_abingdonii	ENSCABP00000027539	97.2516	97.0402
ENSG00000170365	homo_sapiens	ENSP00000305769	95.914	91.1828	seriola_dumerili	ENSSDUP00000028431	95.5032	90.7923
ENSG00000170365	homo_sapiens	ENSP00000305769	89.8925	84.3011	cottoperca_gobio	ENSCGOP00000014972	88.5593	83.0508
ENSG00000170365	homo_sapiens	ENSP00000305769	97.8495	96.9893	struthio_camelus_australis	ENSSCUP00000022331	97.8495	96.9893
ENSG00000170365	homo_sapiens	ENSP00000305769	98.2796	97.2043	anser_brachyrhynchus	ENSABRP00000016695	98.2796	97.2043
ENSG00000170365	homo_sapiens	ENSP00000305769	95.0538	90.3226	gasterosteus_aculeatus	ENSGACP00000022753	94.0426	89.3617
ENSG00000170365	homo_sapiens	ENSP00000305769	94.6237	89.0323	cynoglossus_semilaevis	ENSCSEP00000000526	93.617	88.0851
ENSG00000170365	homo_sapiens	ENSP00000305769	95.2688	89.6774	poecilia_formosa	ENSPFOP00000028567	90.0406	84.7561
ENSG00000170365	homo_sapiens	ENSP00000305769	88.172	81.5054	myripristis_murdjan	ENSMMDP00005004392	88.172	81.5054
ENSG00000170365	homo_sapiens	ENSP00000305769	95.914	91.3979	myripristis_murdjan	ENSMMDP00005016536	95.5032	91.0064
ENSG00000170365	homo_sapiens	ENSP00000305769	95.6989	90.3226	sander_lucioperca	ENSSLUP00000017503	94.6809	89.3617
ENSG00000170365	homo_sapiens	ENSP00000305769	98.4946	97.4194	strigops_habroptila	ENSSHBP00005020140	98.4946	97.4194
ENSG00000170365	homo_sapiens	ENSP00000305769	95.914	90.9677	amphiprion_ocellaris	ENSAOCP00000019611	95.5032	90.5782
ENSG00000170365	homo_sapiens	ENSP00000305769	98.9247	98.4946	terrapene_carolina_triunguis	ENSTMTP00000021353	98.9247	98.4946
ENSG00000170365	homo_sapiens	ENSP00000305769	95.2688	90.7527	hucho_hucho	ENSHHUP00000071706	93.6575	89.2178
ENSG00000170365	homo_sapiens	ENSP00000305769	95.2688	90.7527	hucho_hucho	ENSHHUP00000080653	92.0998	87.7339
ENSG00000170365	homo_sapiens	ENSP00000305769	93.5484	89.2473	betta_splendens	ENSBSLP00000000525	94.7712	90.4139
ENSG00000170365	homo_sapiens	ENSP00000305769	94.6237	89.2473	pygocentrus_nattereri	ENSPNAP00000031476	93.2203	87.9237
ENSG00000170365	homo_sapiens	ENSP00000305769	94.1936	89.6774	anabas_testudineus	ENSATEP00000018239	95.4248	90.8497
ENSG00000170365	homo_sapiens	ENSP00000305769	95.914	91.1828	seriola_lalandi_dorsalis	ENSSLDP00000032929	95.5032	90.7923
ENSG00000170365	homo_sapiens	ENSP00000305769	86.6667	83.0107	labrus_bergylta	ENSLBEP00000023893	96.4115	92.3445
ENSG00000170365	homo_sapiens	ENSP00000305769	95.6989	90.9677	pundamilia_nyererei	ENSPNYP00000016484	95.2891	90.5782
ENSG00000170365	homo_sapiens	ENSP00000305769	95.914	90.9677	mastacembelus_armatus	ENSMAMP00000021007	95.2991	90.3846
ENSG00000170365	homo_sapiens	ENSP00000305769	95.914	91.1828	stegastes_partitus	ENSSPAP00000004124	95.5032	90.7923
ENSG00000170365	homo_sapiens	ENSP00000305769	50.9677	46.4516	oncorhynchus_tshawytscha	ENSOTSP00005082533	63.2	57.6
ENSG00000170365	homo_sapiens	ENSP00000305769	95.914	91.1828	acanthochromis_polyacanthus	ENSAPOP00000016596	95.5032	90.7923
ENSG00000170365	homo_sapiens	ENSP00000305769	98.4946	97.6344	aquila_chrysaetos_chrysaetos	ENSACCP00020006087	98.4946	97.6344
ENSG00000170365	homo_sapiens	ENSP00000305769	89.2473	82.1505	nothobranchius_furzeri	ENSNFUP00015005884	85.7438	78.9256
ENSG00000170365	homo_sapiens	ENSP00000305769	95.2688	89.8925	cyprinodon_variegatus	ENSCVAP00000001053	94.8608	89.5075
ENSG00000170365	homo_sapiens	ENSP00000305769	91.3979	86.4516	denticeps_clupeoides	ENSDCDP00000033666	89.4737	84.6316
ENSG00000170365	homo_sapiens	ENSP00000305769	95.4839	90.7527	larimichthys_crocea	ENSLCRP00005026880	94.6695	89.9787
ENSG00000170365	homo_sapiens	ENSP00000305769	96.129	90.3226	takifugu_rubripes	ENSTRUP00000036666	95.3092	89.5522
ENSG00000170365	homo_sapiens	ENSP00000305769	98.4946	96.9893	ficedula_albicollis	ENSFALP00000005757	98.4946	96.9893
ENSG00000170365	homo_sapiens	ENSP00000305769	94.8387	89.4624	hippocampus_comes	ENSHCOP00000004145	94.8387	89.4624
ENSG00000170365	homo_sapiens	ENSP00000305769	94.6237	88.6021	cyprinus_carpio_carpio	ENSCCRP00000051112	93.2203	87.2881
ENSG00000170365	homo_sapiens	ENSP00000305769	94.4086	89.0323	cyprinus_carpio_carpio	ENSCCRP00000051110	93.0085	87.7119
ENSG00000170365	homo_sapiens	ENSP00000305769	98.2796	97.2043	coturnix_japonica	ENSCJPP00005001743	98.2796	97.2043
ENSG00000170365	homo_sapiens	ENSP00000305769	95.2688	89.6774	poecilia_latipinna	ENSPLAP00000002062	94.8608	89.2934
ENSG00000170365	homo_sapiens	ENSP00000305769	85.3763	80	sinocyclocheilus_grahami	ENSSGRP00000062617	86.6812	81.2227
ENSG00000170365	homo_sapiens	ENSP00000305769	83.2258	78.4946	sinocyclocheilus_grahami	ENSSGRP00000013976	87.5566	82.5792
ENSG00000170365	homo_sapiens	ENSP00000305769	95.6989	90.9677	maylandia_zebra	ENSMZEP00005012283	95.2891	90.5782
ENSG00000170365	homo_sapiens	ENSP00000305769	95.914	90.1075	tetraodon_nigroviridis	ENSTNIP00000020870	94.8936	89.1489
ENSG00000170365	homo_sapiens	ENSP00000305769	50.1075	46.2366	paramormyrops_kingsleyae	ENSPKIP00000038154	78.4512	72.3906
ENSG00000170365	homo_sapiens	ENSP00000305769	94.6237	89.0323	scleropages_formosus	ENSSFOP00015025760	94.2184	88.651
ENSG00000170365	homo_sapiens	ENSP00000305769	96.9893	94.8387	leptobrachium_leishanense	ENSLLEP00000003619	97.1983	95.0431
ENSG00000170365	homo_sapiens	ENSP00000305769	95.2688	89.2473	scophthalmus_maximus	ENSSMAP00000007528	94.6581	88.6752
ENSG00000170365	homo_sapiens	ENSP00000305769	95.0538	90.1075	oryzias_melastigma	ENSOMEP00000002733	93.8429	88.9597

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category
GO:0000165	involved_in MAPK cascade	1	IEA	Homo_sapiens(9606)	Process
GO:0000785	part_of chromatin	1	ISA	Homo_sapiens(9606)	Component
GO:0000978	enables RNA polymerase II cis-regulatory region sequence-specific DNA binding	2	IBA,IDA	Homo_sapiens(9606)	Function
GO:0000981	enables DNA-binding transcription factor activity, RNA polymerase II-specific	2	IBA,ISA	Homo_sapiens(9606)	Function
GO:0001228	enables DNA-binding transcription activator activity, RNA polymerase II-specific	1	IDA	Homo_sapiens(9606)	Function
GO:0001503	involved_in ossification	1	IGI	Homo_sapiens(9606)	Process
GO:0001657	involved_in ureteric bud development	1	IEA	Homo_sapiens(9606)	Process
GO:0001710	involved_in mesodermal cell fate commitment	1	IEA	Homo_sapiens(9606)	Process
GO:0002051	involved_in osteoblast fate commitment	1	IEA	Homo_sapiens(9606)	Process
GO:0003161	involved_in cardiac conduction system development	1	NAS	Homo_sapiens(9606)	Process
GO:0003700	enables DNA-binding transcription factor activity	1	IDA	Homo_sapiens(9606)	Function
GO:0005515	enables protein binding	1	IPI	Homo_sapiens(9606)	Function
GO:0005634	located_in nucleus	4	IDA,ISS,NAS,TAS	Homo_sapiens(9606)	Component
GO:0005637	located_in nuclear inner membrane	1	IDA	Homo_sapiens(9606)	Component
GO:0005654	located_in nucleoplasm	1	TAS	Homo_sapiens(9606)	Component
GO:0005737	located_in cytoplasm	2	IDA,ISS	Homo_sapiens(9606)	Component
GO:0005829	located_in cytosol	1	TAS	Homo_sapiens(9606)	Component
GO:0006351	involved_in DNA-templated transcription	1	IDA	Homo_sapiens(9606)	Process
GO:0006357	involved_in regulation of transcription by RNA polymerase II	1	IBA	Homo_sapiens(9606)	Process
GO:0006366	involved_in transcription by RNA polymerase II	1	IEA	Homo_sapiens(9606)	Process
GO:0006468	involved_in protein phosphorylation	1	IEA	Homo_sapiens(9606)	Process
GO:0006954	involved_in inflammatory response	1	IEA	Homo_sapiens(9606)	Process
GO:0007165	involved_in signal transduction	1	NAS	Homo_sapiens(9606)	Process
GO:0007179	involved_in transforming growth factor beta receptor signaling pathway	3	IBA,IDA,NAS	Homo_sapiens(9606)	Process
GO:0007276	involved_in gamete generation	1	IEA	Homo_sapiens(9606)	Process
GO:0008285	involved_in negative regulation of cell population proliferation	1	IEA	Homo_sapiens(9606)	Process
GO:0009653	involved_in anatomical structure morphogenesis	1	IBA	Homo_sapiens(9606)	Process
GO:0009880	involved_in embryonic pattern specification	1	ISS	Homo_sapiens(9606)	Process
GO:0010628	involved_in positive regulation of gene expression	1	IDA	Homo_sapiens(9606)	Process
GO:0016020	located_in membrane	1	NAS	Homo_sapiens(9606)	Component
GO:0017151	enables DEAD/H-box RNA helicase binding	1	IPI	Homo_sapiens(9606)	Function
GO:0019901	enables protein kinase binding	1	IPI	Homo_sapiens(9606)	Function
GO:0030154	involved_in cell differentiation	1	IBA	Homo_sapiens(9606)	Process
GO:0030509	involved_in BMP signaling pathway	5	IBA,IDA,IMP,ISS,TAS	Homo_sapiens(9606)	Process
GO:0030901	involved_in midbrain development	1	IEA	Homo_sapiens(9606)	Process
GO:0030902	involved_in hindbrain development	1	IEA	Homo_sapiens(9606)	Process
GO:0031053	involved_in primary miRNA processing	1	TAS	Homo_sapiens(9606)	Process
GO:0032991	part_of protein-containing complex	1	IDA	Homo_sapiens(9606)	Component
GO:0042592	involved_in homeostatic process	1	IEA	Homo_sapiens(9606)	Process
GO:0042802	enables identical protein binding	1	IPI	Homo_sapiens(9606)	Function
GO:0045669	involved_in positive regulation of osteoblast differentiation	1	IEA	Homo_sapiens(9606)	Process
GO:0045944	involved_in positive regulation of transcription by RNA polymerase II	2	IC,IDA	Homo_sapiens(9606)	Process
GO:0046872	enables metal ion binding	1	IEA	Homo_sapiens(9606)	Function
GO:0051148	involved_in negative regulation of muscle cell differentiation	1	IEA	Homo_sapiens(9606)	Process
GO:0051216	involved_in cartilage development	1	IEA	Homo_sapiens(9606)	Process
GO:0060038	involved_in cardiac muscle cell proliferation	1	IEA	Homo_sapiens(9606)	Process
GO:0060348	involved_in bone development	1	IEA	Homo_sapiens(9606)	Process
GO:0060395	involved_in SMAD protein signal transduction	4	IBA,IGI,ISS,NAS	Homo_sapiens(9606)	Process
GO:0061036	involved_in positive regulation of cartilage development	1	IEA	Homo_sapiens(9606)	Process
GO:0070410	enables co-SMAD binding	1	IPI	Homo_sapiens(9606)	Function
GO:0070411	enables I-SMAD binding	2	IBA,IPI	Homo_sapiens(9606)	Function
GO:0070878	enables primary miRNA binding	1	IEA	Homo_sapiens(9606)	Function
GO:0071141	part_of SMAD protein complex	1	NAS	Homo_sapiens(9606)	Component
GO:0071142	part_of homomeric SMAD protein complex	1	IPI	Homo_sapiens(9606)	Component
GO:0071144	part_of heteromeric SMAD protein complex	2	IBA,IPI	Homo_sapiens(9606)	Component
GO:0071407	involved_in cellular response to organic cyclic compound	1	IEA	Homo_sapiens(9606)	Process
GO:1901522	involved_in positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus	1	ISS	Homo_sapiens(9606)	Process
GO:1902895	involved_in positive regulation of miRNA transcription	1	IEA	Homo_sapiens(9606)	Process
GO:1903672	involved_in positive regulation of sprouting angiogenesis	1	IMP	Homo_sapiens(9606)	Process

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression