Welcome to
RBP World!
Functions and Diseases
RBP Type | Canonical_RBPs |
Diseases | Cancer |
Drug | N.A. |
Main interacting RNAs | mRNA |
Moonlighting functions | N.A. |
Localizations | Stress granucleNucleoli |
BulkPerturb-seq | DataSet_01_326 DataSet_01_328 |
Description
Ensembl ID | ENSG00000163950 | Gene ID | 7884 | Accession | 10904 |
Symbol | SLBP | Alias | HBP | Full Name | stem-loop histone mRNA binding protein |
Status | Confidence | Length | 19614 bases | Strand | Minus strand |
Position | 4 : 1692731 - 1712344 | RNA binding domain | SLBP_RNA_bind | ||
Summary | This gene encodes a protein that binds to the stem-loop structure in replication-dependent histone mRNAs. Histone mRNAs do not contain introns or polyadenylation signals, and are processed by endonucleolytic cleavage. The stem-loop structure is essential for efficient processing but this structure also controls the transport, translation and stability of histone mRNAs. Expression of the protein is regulated during the cell cycle, increasing more than 10-fold during the latter part of G1. [provided by RefSeq, Jul 2008] |
RNA binding domains (RBDs)
Protein | Domain | Pfam ID | E-value | Domain number |
---|---|---|---|---|
ENSP00000418658 | SLBP_RNA_bind | PF15247 | 2.7e-29 | 1 |
ENSP00000426891 | SLBP_RNA_bind | PF15247 | 2.7e-29 | 1 |
ENSP00000406322 | SLBP_RNA_bind | PF15247 | 5.5e-29 | 1 |
ENSP00000417686 | SLBP_RNA_bind | PF15247 | 7.4e-29 | 1 |
ENSP00000316490 | SLBP_RNA_bind | PF15247 | 7.8e-29 | 1 |
ENSP00000417359 | SLBP_RNA_bind | PF15247 | 4.6e-16 | 1 |
RNA binding proteomes (RBPomes)
Pubmed ID | Full Name | Cell | Author | Time | Doi |
---|
Literatures on RNA binding capacity
Pubmed ID | Title | Author | Time | Journal |
---|---|---|---|---|
26377992 | A multiprotein occupancy map of the mRNP on the 3' end of histone mRNAs. | Lionel Brooks | 2015-11-01 | RNA (New York, N.Y.) |
32266261 | Pinning Down the Transcription: A Role for Peptidyl-Prolyl cis-trans Isomerase Pin1 in Gene Expression. | Xiangming Hu | 2020-01-01 | Frontiers in cell and developmental biology |
25379382 | Contribution of protein phosphorylation to binding-induced folding of the SLBP-histone mRNA complex probed by phosphorus-31 NMR. | Roopa Thapar | 2014-01-01 | FEBS open bio |
22907757 | The prolyl isomerase Pin1 targets stem-loop binding protein (SLBP) to dissociate the SLBP-histone mRNA complex linking histone mRNA decay with SLBP ubiquitination. | Nithya Krishnan | 2012-11-01 | Molecular and cellular biology |
31162604 | Discovering sequence and structure landscapes in RNA interaction motifs. | Marta Adinolfi | 2019-06-04 | Nucleic acids research |
25934501 | The end of the message: multiple protein-RNA interactions define the mRNA polyadenylation site. | Yongsheng Shi | 2015-05-01 | Genes & development |
34416372 | Stem-loop binding protein and metal carcinogenesis. | R Beatrix Bradford | 2021-11-01 | Seminars in cancer biology |
29104761 | Fiat Lux: illuminating the cell cycle. | Gianmaria Liccardi | 2017-01-01 | Cell death discovery |
36018788 | PRIESSTESS: interpretable, high-performing models of the sequence and structure preferences of RNA-binding proteins. | U Kaitlin Laverty | 2022-10-28 | Nucleic acids research |
35013239 | Proximity labeling identifies a repertoire of site-specific R-loop modulators. | Qingqing Yan | 2022-01-10 | Nature communications |
15546920 | The human histone gene expression regulator HBP/SLBP is required for histone and DNA synthesis, cell cycle progression and cell proliferation in mitotic cells. | Xiujie Zhao | 2004-12-01 | Journal of cell science |
27798610 | Fluorescent indicators for simultaneous reporting of all four cell cycle phases. | T Bryce Bajar | 2016-12-01 | Nature methods |
35037047 | 53BP1-ACLY-SLBP-coordinated activation of replication-dependent histone biogenesis maintains genomic integrity. | TingTing Wu | 2022-02-22 | Nucleic acids research |
31230714 | Programmable RNA-Guided RNA Effector Proteins Built from Human Parts. | Simone Rauch | 2019-06-27 | Cell |
29357066 | The Temporal Regulation of S Phase Proteins During G1. | D Gavin Grant | 2017-01-01 | Advances in experimental medicine and biology |
18927579 | Metabolism and regulation of canonical histone mRNAs: life without a poly(A) tail. | F William Marzluff | 2008-11-01 | Nature reviews. Genetics |
36835083 | Basic Methods of Cell Cycle Analysis. | Anna Ligasová | 2023-02-12 | International journal of molecular sciences |
23329046 | Structure of histone mRNA stem-loop, human stem-loop binding protein, and 3'hExo ternary complex. | Dazhi Tan | 2013-01-18 | Science (New York, N.Y.) |
37516934 | Uridylation of the histone mRNA stem-loop weakens binding interactions with SLBP while maintaining interactions with 3'hExo. | Morgan Shine | 2023-01-01 | RNA biology |
23941746 | Replication stress-induced alternative mRNA splicing alters properties of the histone RNA-binding protein HBP/SLBP: a key factor in the control of histone gene expression. | J M Alexander Rattray | 2013-09-06 | Bioscience reports |
28289156 | U7 snRNP is recruited to histone pre-mRNA in a FLASH-dependent manner by two separate regions of the stem-loop binding protein. | Aleksandra Skrajna | 2017-06-01 | RNA (New York, N.Y.) |
23286197 | Assembly of the SLIP1-SLBP complex on histone mRNA requires heterodimerization and sequential binding of SLBP followed by SLIP1. | Nitin Bansal | 2013-01-22 | Biochemistry |
23142872 | Systematic reconstruction of RNA functional motifs with high-throughput microfluidics. | Lance Martin | 2012-12-01 | Nature methods |
Transcripts
Name | Transcript ID | bp | Protein | Translation ID |
---|---|---|---|---|
SLBP-206 | ENST00000489418 | 1810 | 270aa | ENSP00000417686 |
SLBP-202 | ENST00000429429 | 1623 | 231aa | ENSP00000406322 |
SLBP-201 | ENST00000318386 | 1635 | 277aa | ENSP00000316490 |
SLBP-204 | ENST00000483348 | 1030 | 225aa | ENSP00000426891 |
SLBP-205 | ENST00000488267 | 987 | 235aa | ENSP00000418658 |
SLBP-203 | ENST00000480936 | 558 | 186aa | ENSP00000417359 |
GWAS
ensgID | SNP | Chromosome | Position | Trait | PubmedID | Or or BEAT | EFO ID |
---|
Protein-Protein Interaction (PPI)
Paralogs
Ensembl ID | Source | Target | ||||||
---|---|---|---|---|---|---|---|---|
Species | Protein ID | Perc_pos | Perc_id | Species | Protein ID | Perc_pos | Perc_id | |
ENSG00000163950 |
Orthologs
Ensembl ID | Source | Target | ||||||
---|---|---|---|---|---|---|---|---|
Species | Protein ID | Perc_pos | Perc_id | Species | Protein ID | Perc_pos | Perc_id | |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 100 | 100 | nomascus_leucogenys | ENSNLEP00000000061 | 97.4729 | 97.4729 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 99.2593 | 99.2593 | pan_paniscus | ENSPPAP00000020194 | 99.2593 | 99.2593 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 94.8148 | 94.8148 | pongo_abelii | ENSPPYP00000035397 | 65.9794 | 65.9794 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 93.7037 | 93.7037 | pan_troglodytes | ENSPTRP00000088685 | 93.0147 | 93.0147 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 100 | 100 | gorilla_gorilla | ENSGGOP00000003115 | 100 | 100 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 83.7037 | 77.4074 | ornithorhynchus_anatinus | ENSOANP00000022449 | 62.4309 | 57.7348 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 86.6667 | 79.2593 | sarcophilus_harrisii | ENSSHAP00000044433 | 69.8507 | 63.8806 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 60 | 56.6667 | notamacropus_eugenii | ENSMEUP00000002289 | 91.0112 | 85.9551 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 86.6667 | 81.1111 | dasypus_novemcinctus | ENSDNOP00000030210 | 84.1727 | 78.777 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 74.0741 | 68.8889 | echinops_telfairi | ENSETEP00000003790 | 85.4701 | 79.4872 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 85.1852 | 80.3704 | callithrix_jacchus | ENSCJAP00000083351 | 56.9307 | 53.7129 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 98.1481 | 97.4074 | cercocebus_atys | ENSCATP00000009888 | 94.9821 | 94.2652 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 100 | 99.2593 | macaca_fascicularis | ENSMFAP00000054840 | 97.4729 | 96.7509 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 100 | 99.2593 | macaca_mulatta | ENSMMUP00000059768 | 77.3639 | 76.7908 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 81.4815 | 80.7407 | macaca_nemestrina | ENSMNEP00000001793 | 96.9163 | 96.0352 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 87.037 | 86.2963 | papio_anubis | ENSPANP00000035784 | 74.3671 | 73.7342 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 81.4815 | 80 | mandrillus_leucophaeus | ENSMLEP00000005683 | 85.6031 | 84.0467 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 74.8148 | 72.2222 | tursiops_truncatus | ENSTTRP00000010328 | 93.5185 | 90.2778 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 60.3704 | 57.4074 | tursiops_truncatus | ENSTTRP00000003760 | 92.0904 | 87.5706 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 89.6296 | 84.8148 | vulpes_vulpes | ENSVVUP00000021176 | 44.4037 | 42.0183 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 81.8519 | 77.4074 | mus_spretus | MGP_SPRETEiJ_P0070174 | 88.4 | 83.6 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 85.5556 | 81.8519 | equus_asinus | ENSEASP00005052652 | 75.9868 | 72.6974 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 90.7407 | 85.9259 | capra_hircus | ENSCHIP00000020855 | 89.0909 | 84.3636 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 76.2963 | 72.5926 | loxodonta_africana | ENSLAFP00000010814 | 85.124 | 80.9917 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 91.8519 | 89.2593 | panthera_leo | ENSPLOP00000006543 | 88.5714 | 86.0714 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 85.1852 | 81.1111 | ailuropoda_melanoleuca | ENSAMEP00000043697 | 32.3034 | 30.7584 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 86.2963 | 78.8889 | bos_indicus_hybrid | ENSBIXP00005002173 | 52.8345 | 48.2993 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 93.7037 | 90 | equus_caballus | ENSECAP00000009611 | 90.681 | 87.0968 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 91.8519 | 88.1481 | canis_lupus_familiaris | ENSCAFP00845000279 | 87.9433 | 84.3972 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 83.3333 | 80.7407 | panthera_pardus | ENSPPRP00000026238 | 86.2069 | 83.5249 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 67.037 | 65.5556 | marmota_marmota_marmota | ENSMMMP00000010354 | 94.2708 | 92.1875 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 91.8519 | 88.1481 | balaenoptera_musculus | ENSBMSP00010013841 | 88.8889 | 85.3047 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 87.037 | 84.0741 | cavia_porcellus | ENSCPOP00000000027 | 85.4545 | 82.5455 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 82.2222 | 78.5185 | felis_catus | ENSFCAP00000052855 | 68.0982 | 65.0307 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 91.8519 | 88.1481 | ursus_americanus | ENSUAMP00000016308 | 89.5307 | 85.9206 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 85.9259 | 78.5185 | monodelphis_domestica | ENSMODP00000005298 | 81.4035 | 74.386 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 80 | 75.5556 | bison_bison_bison | ENSBBBP00000027408 | 91.5254 | 86.4407 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 91.4815 | 87.4074 | monodon_monoceros | ENSMMNP00015012002 | 88.5305 | 84.5878 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 90.3704 | 84.0741 | sus_scrofa | ENSSSCP00000009249 | 88.7273 | 82.5455 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 95.1852 | 92.963 | microcebus_murinus | ENSMICP00000045277 | 95.1852 | 92.963 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 87.7778 | 84.8148 | octodon_degus | ENSODEP00000017156 | 89.7727 | 86.7424 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 91.1111 | 87.037 | jaculus_jaculus | ENSJJAP00000001732 | 90.4412 | 86.3971 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 92.5926 | 88.1481 | jaculus_jaculus | ENSJJAP00000019653 | 90.9091 | 86.5455 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 90.7407 | 86.2963 | ovis_aries_rambouillet | ENSOARP00020030965 | 89.0909 | 84.7273 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 67.4074 | 65.1852 | ursus_maritimus | ENSUMAP00000007967 | 94.7917 | 91.6667 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 77.037 | 72.5926 | delphinapterus_leucas | ENSDLEP00000022993 | 60.1156 | 56.6474 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 81.1111 | 79.2593 | physeter_catodon | ENSPCTP00005010135 | 92.7966 | 90.678 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 92.963 | 88.5185 | mus_caroli | MGP_CAROLIEiJ_P0067548 | 91.2727 | 86.9091 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 93.3333 | 88.8889 | mus_musculus | ENSMUSP00000062930 | 91.6364 | 87.2727 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 75.1852 | 71.8519 | dipodomys_ordii | ENSDORP00000023260 | 93.9815 | 89.8148 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 64.8148 | 62.2222 | mustela_putorius_furo | ENSMPUP00000011048 | 89.7436 | 86.1538 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 97.4074 | 96.2963 | aotus_nancymaae | ENSANAP00000034309 | 94.9458 | 93.8628 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 68.5185 | 67.037 | saimiri_boliviensis_boliviensis | ENSSBOP00000035483 | 98.9305 | 96.7914 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 87.7778 | 84.8148 | chlorocebus_sabaeus | ENSCSAP00000011690 | 86.1818 | 83.2727 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 62.963 | 61.1111 | tupaia_belangeri | ENSTBEP00000003539 | 67.4603 | 65.4762 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 94.0741 | 88.5185 | mesocricetus_auratus | ENSMAUP00000007955 | 92.3636 | 86.9091 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 90.7407 | 86.6667 | phocoena_sinus | ENSPSNP00000026343 | 73.1343 | 69.8507 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 78.5185 | 75.9259 | camelus_dromedarius | ENSCDRP00005007475 | 88.7029 | 85.7741 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 94.8148 | 92.963 | carlito_syrichta | ENSTSYP00000017477 | 94.8148 | 92.963 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 66.2963 | 64.8148 | panthera_tigris_altaica | ENSPTIP00000016200 | 93.2292 | 91.1458 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 93.7037 | 88.5185 | rattus_norvegicus | ENSRNOP00000047799 | 92 | 86.9091 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 60.3704 | 52.5926 | rattus_norvegicus | ENSRNOP00000076822 | 67.3554 | 58.6777 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 94.8148 | 92.5926 | prolemur_simus | ENSPSMP00000002796 | 92.4188 | 90.2527 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 93.7037 | 87.4074 | microtus_ochrogaster | ENSMOCP00000017127 | 92 | 85.8182 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 94.4444 | 88.5185 | peromyscus_maniculatus_bairdii | ENSPEMP00000020389 | 92.7273 | 86.9091 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 76.2963 | 72.5926 | bos_mutus | ENSBMUP00000028670 | 84.7737 | 80.6584 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 93.3333 | 88.8889 | mus_spicilegus | ENSMSIP00000024125 | 91.6364 | 87.2727 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 94.0741 | 88.1481 | cricetulus_griseus_chok1gshd | ENSCGRP00001007351 | 92.3636 | 86.5455 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 91.4815 | 85.1852 | cricetulus_griseus_chok1gshd | ENSCGRP00001011314 | 91.8216 | 85.5019 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 86.6667 | 81.1111 | pteropus_vampyrus | ENSPVAP00000002652 | 89.6552 | 83.908 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 73.7037 | 70 | myotis_lucifugus | ENSMLUP00000004026 | 85.4077 | 81.1159 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 87.037 | 77.7778 | vombatus_ursinus | ENSVURP00010027764 | 79.932 | 71.4286 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 88.5185 | 84.0741 | rhinolophus_ferrumequinum | ENSRFEP00010016634 | 55.0691 | 52.3041 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 92.2222 | 88.8889 | neovison_vison | ENSNVIP00000029114 | 89.2473 | 86.0215 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 89.6296 | 84.8148 | bos_taurus | ENSBTAP00000062520 | 60.5 | 57.25 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 80 | 75.5556 | heterocephalus_glaber_female | ENSHGLP00000040524 | 78.2609 | 73.913 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 98.1481 | 97.4074 | rhinopithecus_bieti | ENSRBIP00000030622 | 94.9821 | 94.2652 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 91.8519 | 88.1481 | canis_lupus_dingo | ENSCAFP00020015350 | 90.1818 | 86.5455 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 92.5926 | 88.5185 | sciurus_vulgaris | ENSSVLP00005013958 | 90.9091 | 86.9091 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 87.037 | 79.2593 | phascolarctos_cinereus | ENSPCIP00000017788 | 79.661 | 72.5424 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 91.1111 | 86.6667 | nannospalax_galili | ENSNGAP00000021693 | 89.4545 | 85.0909 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 90 | 85.1852 | bos_grunniens | ENSBGRP00000028940 | 57.7197 | 54.6318 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 87.4074 | 85.1852 | chinchilla_lanigera | ENSCLAP00000011836 | 88.3895 | 86.1423 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 91.4815 | 86.2963 | cervus_hanglu_yarkandensis | ENSCHYP00000039401 | 89.8182 | 84.7273 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 90.3704 | 84.8148 | catagonus_wagneri | ENSCWAP00000028107 | 87.4552 | 82.0788 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 92.963 | 89.6296 | ictidomys_tridecemlineatus | ENSSTOP00000025519 | 91.2727 | 88 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 95.9259 | 92.5926 | otolemur_garnettii | ENSOGAP00000008719 | 95.9259 | 92.5926 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 63.3333 | 60.3704 | cebus_imitator | ENSCCAP00000016690 | 90 | 85.7895 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 91.4815 | 88.1481 | urocitellus_parryii | ENSUPAP00010003324 | 51.2448 | 49.3776 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 90.7407 | 85.1852 | moschus_moschiferus | ENSMMSP00000014743 | 89.0909 | 83.6364 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 94.4444 | 94.0741 | rhinopithecus_roxellana | ENSRROP00000011493 | 93.0657 | 92.7007 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 93.3333 | 88.8889 | mus_pahari | MGP_PahariEiJ_P0030761 | 91.6364 | 87.2727 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 94.8148 | 92.963 | propithecus_coquereli | ENSPCOP00000011751 | 94.8148 | 92.963 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 41.4815 | 27.4074 | caenorhabditis_elegans | R06F6.1.1 | 29.3194 | 19.3717 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 38.1481 | 25.9259 | drosophila_melanogaster | FBpp0084778 | 37.3188 | 25.3623 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 25.1852 | 18.8889 | ciona_intestinalis | ENSCINP00000030129 | 51.5152 | 38.6364 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 29.6296 | 25.1852 | petromyzon_marinus | ENSPMAP00000003295 | 71.4286 | 60.7143 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 68.5185 | 53.7037 | callorhinchus_milii | ENSCMIP00000023039 | 56.7485 | 44.4785 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 67.037 | 54.0741 | latimeria_chalumnae | ENSLACP00000016591 | 61.7747 | 49.8294 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 69.2593 | 55.5556 | lepisosteus_oculatus | ENSLOCP00000013532 | 62.7517 | 50.3356 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 59.6296 | 45.9259 | clupea_harengus | ENSCHAP00000000914 | 61.4504 | 47.3282 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 60 | 47.037 | danio_rerio | ENSDARP00000140437 | 53.6424 | 42.053 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 57.4074 | 43.3333 | carassius_auratus | ENSCARP00000119203 | 56.5693 | 42.7007 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 53.7037 | 43.3333 | carassius_auratus | ENSCARP00000015857 | 67.4419 | 54.4186 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 61.4815 | 49.2593 | astyanax_mexicanus | ENSAMXP00000014954 | 61.0294 | 48.8971 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 55.1852 | 47.037 | ictalurus_punctatus | ENSIPUP00000024802 | 57.3077 | 48.8462 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 64.0741 | 51.4815 | esox_lucius | ENSELUP00000057022 | 62.2302 | 50 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 55.1852 | 44.8148 | electrophorus_electricus | ENSEEEP00000017713 | 62.8692 | 51.0549 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 64.4444 | 51.1111 | oncorhynchus_kisutch | ENSOKIP00005046811 | 63.7363 | 50.5494 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 58.1481 | 47.037 | oncorhynchus_kisutch | ENSOKIP00005016828 | 58.3643 | 47.2119 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 54.8148 | 43.7037 | oncorhynchus_mykiss | ENSOMYP00000009949 | 57.3643 | 45.7364 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 64.4444 | 51.1111 | oncorhynchus_mykiss | ENSOMYP00000098886 | 63.7363 | 50.5494 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 57.037 | 46.2963 | salmo_salar | ENSSSAP00000072174 | 61.1111 | 49.6032 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 64.0741 | 51.4815 | salmo_trutta | ENSSTUP00000067972 | 63.37 | 50.9158 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 61.4815 | 50.3704 | gadus_morhua | ENSGMOP00000016433 | 61.0294 | 50 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 58.8889 | 46.2963 | fundulus_heteroclitus | ENSFHEP00000025339 | 60.4563 | 47.5285 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 60.7407 | 47.4074 | poecilia_reticulata | ENSPREP00000006585 | 60.7407 | 47.4074 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 61.1111 | 47.7778 | xiphophorus_maculatus | ENSXMAP00000001324 | 60.4396 | 47.2527 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 58.8889 | 48.1481 | oryzias_latipes | ENSORLP00000040501 | 59.3284 | 48.5075 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 62.5926 | 50.3704 | cyclopterus_lumpus | ENSCLMP00005008536 | 60.7914 | 48.9209 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 61.8519 | 48.5185 | oreochromis_niloticus | ENSONIP00000066025 | 60.0719 | 47.1223 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 61.1111 | 47.7778 | haplochromis_burtoni | ENSHBUP00000022848 | 59.3525 | 46.4029 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 61.1111 | 47.7778 | astatotilapia_calliptera | ENSACLP00000010290 | 59.3525 | 46.4029 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 60.7407 | 46.2963 | sparus_aurata | ENSSAUP00010028250 | 58.7814 | 44.8029 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 60.7407 | 48.1481 | lates_calcarifer | ENSLCAP00010021754 | 57.9505 | 45.9364 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 68.1481 | 54.8148 | xenopus_tropicalis | ENSXETP00000008408 | 72.4409 | 58.2677 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 80.3704 | 71.8519 | chrysemys_picta_bellii | ENSCPBP00000000912 | 77.7778 | 69.534 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 74.0741 | 64.4444 | sphenodon_punctatus | ENSSPUP00000020831 | 76.3359 | 66.4122 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 72.2222 | 64.0741 | crocodylus_porosus | ENSCPRP00005001817 | 61.7089 | 54.7468 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 67.037 | 57.4074 | laticauda_laticaudata | ENSLLTP00000006343 | 72.9839 | 62.5 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 65.9259 | 57.037 | notechis_scutatus | ENSNSUP00000010935 | 72.3577 | 62.6016 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 67.4074 | 58.5185 | pseudonaja_textilis | ENSPTXP00000015894 | 73.3871 | 63.7097 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 78.5185 | 71.4815 | anas_platyrhynchos_platyrhynchos | ENSAPLP00000015887 | 53.5354 | 48.7374 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 80 | 70.7407 | gallus_gallus | ENSGALP00010023223 | 48.8688 | 43.2127 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 71.1111 | 63.7037 | meleagris_gallopavo | ENSMGAP00000013806 | 80.6723 | 72.2689 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 77.037 | 68.1481 | serinus_canaria | ENSSCAP00000020894 | 75.9124 | 67.1533 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 76.2963 | 68.1481 | parus_major | ENSPMJP00000022665 | 68.6667 | 61.3333 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 57.7778 | 45.5556 | neolamprologus_brichardi | ENSNBRP00000007763 | 60 | 47.3077 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 67.037 | 58.1481 | naja_naja | ENSNNAP00000012112 | 72.6908 | 63.0522 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 73.7037 | 64.4444 | podarcis_muralis | ENSPMRP00000005605 | 75.9542 | 66.4122 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 75.1852 | 66.6667 | geospiza_fortis | ENSGFOP00000010383 | 73.8182 | 65.4545 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 77.037 | 68.8889 | taeniopygia_guttata | ENSTGUP00000010961 | 75.9124 | 67.8832 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 71.8519 | 59.6296 | erpetoichthys_calabaricus | ENSECRP00000027609 | 66.2116 | 54.9488 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 61.1111 | 47.037 | kryptolebias_marmoratus | ENSKMAP00000010898 | 59.3525 | 45.6835 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 71.4815 | 61.1111 | salvator_merianae | ENSSMRP00000029637 | 73.6641 | 62.9771 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 58.5185 | 47.7778 | oryzias_javanicus | ENSOJAP00000037242 | 60.076 | 49.0494 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 56.6667 | 48.8889 | amphilophus_citrinellus | ENSACIP00000028825 | 59.0734 | 50.9653 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 59.6296 | 48.1481 | dicentrarchus_labrax | ENSDLAP00005009814 | 58.5455 | 47.2727 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 61.1111 | 48.5185 | amphiprion_percula | ENSAPEP00000024776 | 58.5106 | 46.4539 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 62.2222 | 49.2593 | oryzias_sinensis | ENSOSIP00000048890 | 41.5842 | 32.9208 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 79.6296 | 71.1111 | gopherus_evgoodei | ENSGEVP00005002340 | 77.6173 | 69.3141 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 79.2593 | 71.1111 | chelonoidis_abingdonii | ENSCABP00000005369 | 76.7025 | 68.8172 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 61.1111 | 48.5185 | seriola_dumerili | ENSSDUP00000001035 | 60 | 47.6364 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 47.037 | 35.9259 | cottoperca_gobio | ENSCGOP00000008893 | 44.2509 | 33.7979 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 79.6296 | 71.1111 | struthio_camelus_australis | ENSSCUP00000021083 | 75.1748 | 67.1329 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 78.5185 | 71.1111 | anser_brachyrhynchus | ENSABRP00000009954 | 75.4448 | 68.3274 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 56.2963 | 45.1852 | gasterosteus_aculeatus | ENSGACP00000025905 | 61.7886 | 49.5935 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 60 | 48.5185 | cynoglossus_semilaevis | ENSCSEP00000031730 | 59.1241 | 47.8102 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 60.7407 | 47.4074 | poecilia_formosa | ENSPFOP00000000431 | 60.7407 | 47.4074 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 53.7037 | 43.3333 | myripristis_murdjan | ENSMMDP00005030778 | 54.5113 | 43.985 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 60 | 47.7778 | myripristis_murdjan | ENSMMDP00005012803 | 57.2438 | 45.583 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 60.3704 | 48.5185 | sander_lucioperca | ENSSLUP00000030206 | 59.9265 | 48.1618 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 78.1481 | 69.2593 | strigops_habroptila | ENSSHBP00005016129 | 54.6632 | 48.4456 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 61.1111 | 48.5185 | amphiprion_ocellaris | ENSAOCP00000019280 | 58.5106 | 46.4539 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 64.8148 | 57.037 | terrapene_carolina_triunguis | ENSTMTP00000003238 | 75.7576 | 66.6667 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 62.963 | 50 | hucho_hucho | ENSHHUP00000016159 | 61.8182 | 49.0909 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 64.0741 | 51.1111 | hucho_hucho | ENSHHUP00000013091 | 63.37 | 50.5494 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 61.4815 | 49.2593 | betta_splendens | ENSBSLP00000010062 | 58.042 | 46.5035 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 60 | 48.8889 | pygocentrus_nattereri | ENSPNAP00000031265 | 60.9023 | 49.6241 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 63.7037 | 51.8519 | anabas_testudineus | ENSATEP00000023572 | 60.7774 | 49.47 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 36.6667 | 29.2593 | seriola_lalandi_dorsalis | ENSSLDP00000029675 | 58.9286 | 47.0238 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 47.037 | 35.9259 | seriola_lalandi_dorsalis | ENSSLDP00000009517 | 48.289 | 36.8821 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 59.6296 | 48.5185 | labrus_bergylta | ENSLBEP00000032786 | 58.3333 | 47.4638 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 61.1111 | 47.7778 | pundamilia_nyererei | ENSPNYP00000007116 | 59.3525 | 46.4029 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 58.8889 | 45.5556 | mastacembelus_armatus | ENSMAMP00000001444 | 56.5836 | 43.7722 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 62.2222 | 49.2593 | stegastes_partitus | ENSSPAP00000005173 | 59.7865 | 47.331 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 64.4444 | 50.7407 | oncorhynchus_tshawytscha | ENSOTSP00005101131 | 63.7363 | 50.1832 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 53.7037 | 42.5926 | oncorhynchus_tshawytscha | ENSOTSP00005085120 | 60.6695 | 48.1172 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 61.4815 | 48.5185 | acanthochromis_polyacanthus | ENSAPOP00000003464 | 58.8652 | 46.4539 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 78.5185 | 70 | aquila_chrysaetos_chrysaetos | ENSACCP00020000143 | 77.3723 | 68.9781 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 58.1481 | 45.9259 | nothobranchius_furzeri | ENSNFUP00015030570 | 56.6787 | 44.7653 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 60 | 47.4074 | cyprinodon_variegatus | ENSCVAP00000030797 | 60.9023 | 48.1203 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 59.6296 | 48.8889 | denticeps_clupeoides | ENSDCDP00000062907 | 62.6459 | 51.3619 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 60 | 49.2593 | larimichthys_crocea | ENSLCRP00005028676 | 58.9091 | 48.3636 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 60.3704 | 48.5185 | takifugu_rubripes | ENSTRUP00000001645 | 59.2727 | 47.6364 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 77.037 | 69.2593 | ficedula_albicollis | ENSFALP00000010440 | 75.9124 | 68.2482 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 60.3704 | 47.4074 | hippocampus_comes | ENSHCOP00000010760 | 59.9265 | 47.0588 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 58.1481 | 45.5556 | cyprinus_carpio_carpio | ENSCCRP00000030760 | 56.4748 | 44.2446 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 58.1481 | 44.0741 | cyprinus_carpio_carpio | ENSCCRP00000016929 | 50.974 | 38.6364 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 78.8889 | 70 | coturnix_japonica | ENSCJPP00005004914 | 77.7372 | 68.9781 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 60.7407 | 47.4074 | poecilia_latipinna | ENSPLAP00000006203 | 60.7407 | 47.4074 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 61.8519 | 46.6667 | sinocyclocheilus_grahami | ENSSGRP00000039954 | 60.7273 | 45.8182 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 58.5185 | 45.5556 | sinocyclocheilus_grahami | ENSSGRP00000038727 | 53.5593 | 41.6949 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 61.1111 | 47.7778 | maylandia_zebra | ENSMZEP00005023046 | 59.3525 | 46.4029 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 54.0741 | 44.0741 | tetraodon_nigroviridis | ENSTNIP00000000887 | 62.3932 | 50.8547 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 67.037 | 54.0741 | paramormyrops_kingsleyae | ENSPKIP00000021992 | 56.2112 | 45.3416 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 65.1852 | 53.7037 | scleropages_formosus | ENSSFOP00015030273 | 64.2336 | 52.9197 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 51.1111 | 40 | leptobrachium_leishanense | ENSLLEP00000003135 | 62.4434 | 48.8688 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 67.4074 | 52.5926 | leptobrachium_leishanense | ENSLLEP00000005436 | 63.4146 | 49.4774 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 60.3704 | 47.037 | scophthalmus_maximus | ENSSMAP00000026208 | 53.268 | 41.5033 |
ENSG00000163950 | homo_sapiens | ENSP00000417686 | 57.7778 | 48.1481 | oryzias_melastigma | ENSOMEP00000028026 | 59.542 | 49.6183 |
Gene Ontology
Go ID | Go term | No. evidence | Entries | Species | Category |
---|---|---|---|---|---|
GO:0002191 | involved_in cap-dependent translational initiation | 1 | IDA | Homo_sapiens(9606) | Process |
GO:0003723 | enables RNA binding | 1 | HDA | Homo_sapiens(9606) | Function |
GO:0003729 | enables mRNA binding | 2 | IBA,IDA | Homo_sapiens(9606) | Function |
GO:0005515 | enables protein binding | 1 | IPI | Homo_sapiens(9606) | Function |
GO:0005634 | located_in nucleus | 1 | IDA | Homo_sapiens(9606) | Component |
GO:0005654 | located_in nucleoplasm | 2 | IDA,TAS | Homo_sapiens(9606) | Component |
GO:0005730 | located_in nucleolus | 1 | IDA | Homo_sapiens(9606) | Component |
GO:0005737 | is_active_in cytoplasm | 3 | IBA,IDA,NAS | Homo_sapiens(9606) | Component |
GO:0005829 | located_in cytosol | 2 | IDA,TAS | Homo_sapiens(9606) | Component |
GO:0006398 | involved_in mRNA 3-end processing by stem-loop binding and cleavage | 2 | IBA,ISS | Homo_sapiens(9606) | Process |
GO:0042802 | enables identical protein binding | 1 | IPI | Homo_sapiens(9606) | Function |
GO:0051028 | involved_in mRNA transport | 2 | IBA,IDA | Homo_sapiens(9606) | Process |
GO:0062073 | part_of histone mRNA stem-loop binding complex | 1 | IPI | Homo_sapiens(9606) | Component |
GO:0071204 | part_of histone pre-mRNA 3end processing complex | 2 | IBA,ISS | Homo_sapiens(9606) | Component |
GO:0071207 | enables histone pre-mRNA stem-loop binding | 2 | IBA,ISS | Homo_sapiens(9606) | Function |
GO:0071208 | enables histone pre-mRNA DCP binding | 1 | ISS | Homo_sapiens(9606) | Function |
GO:1990904 | part_of ribonucleoprotein complex | 1 | TAS | Homo_sapiens(9606) | Component |