Functions and Diseases

RBP Type Canonical_RBPs
Diseases CancerSARS-COV-2
Drug N.A.
Main interacting RNAs mRNA
Moonlighting functions N.A.
Localizations N.A.
BulkPerturb-seq DataSet_01_441 DataSet_01_84

Description

Ensembl ID ENSG00000143368 Gene ID 10262 Accession 10771
Symbol SF3B4 Alias AFD1;Hsh49;SAP49;SF3b49 Full Name splicing factor 3b subunit 4
Status Confidence Length 4487 bases Strand Minus strand
Position 1 : 149923317 - 149927803 RNA binding domain RRM_1
Summary This gene encodes one of four subunits of the splicing factor 3B. The protein encoded by this gene cross-links to a region in the pre-mRNA immediately upstream of the branchpoint sequence in pre-mRNA in the prespliceosomal complex A. It also may be involved in the assembly of the B, C and E spliceosomal complexes. In addition to RNA-binding activity, this protein interacts directly and highly specifically with subunit 2 of the splicing factor 3B. This protein contains two N-terminal RNA-recognition motifs (RRMs), consistent with the observation that it binds directly to pre-mRNA. [provided by RefSeq, Jul 2008]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000271628 RRM_1 PF00076 3.1e-38 1
ENSP00000271628 RRM_1 PF00076 3.1e-38 2
ENSP00000391114 RRM_1 PF00076 8.4e-31 1
ENSP00000391114 RRM_1 PF00076 8.4e-31 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal
36639679 SF3B4 promotes Twist1 expression and clear cell renal cell carcinoma progression by facilitating the export of KLF 16 mRNA from the nucleus to the cytoplasm. Zhan Yang 2023-01-13 Cell death & disease
35030977 Enabled homolog (ENAH) regulated by RNA binding protein splicing factor 3b subunit 4 (SF3B4) exacerbates the proliferation, invasion and migration of hepatocellular carcinoma cells via Notch signaling pathway. Guoming Deng 2022-02-01 Bioengineered
33067435 Analysis of protein-DNA interactions in chromatin by UV induced cross-linking and mass spectrometry. Alexandra Stützer 2020-10-16 Nature communications
35082828 Sequence Divergence and Functional Specializations of the Ancient Spliceosomal SF3b: Implications in Flexibility and Adaptations of the Multi-Protein Complex. Arangasamy Yazhini 2021-01-01 Frontiers in genetics
32140746 The SF3b complex: splicing and beyond. Chengfu Sun 2020-09-01 Cellular and molecular life sciences : CMLS
35210412 SF3B4 promotes ovarian cancer progression by regulating alternative splicing of RAD52. Yuchao Diao 2022-02-24 Cell death & disease
35852380 Intronic Cis-Element DR8 in hTERT Is Bound by Splicing Factor SF3B4 and Regulates hTERT Splicing in Non-Small Cell Lung Cancer. L Aaron Slusher 2022-10-04 Molecular cancer research : MCR

Transcripts

Name Transcript ID bp Protein Translation ID
SF3B4-201 ENST00000271628 1544 424aa ENSP00000271628
SF3B4-202 ENST00000457312 826 190aa ENSP00000391114

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000143368homo_sapiensENSP0000028607021.51912.0253homo_sapiensENSP0000027162824.056613.4434
ENSG00000143368homo_sapiensENSP0000029490430.049319.2118homo_sapiensENSP0000027162828.773618.3962
ENSG00000143368homo_sapiensENSP0000031300722.641514.1509homo_sapiensENSP0000027162833.962321.2264
ENSG00000143368homo_sapiensENSP0000028158922.028513.6292homo_sapiensENSP0000027162832.78320.283
ENSG00000143368homo_sapiensENSP0000035216236.784723.9782homo_sapiensENSP0000027162831.839620.7547
ENSG00000143368homo_sapiensENSP0000030440520.379112.7962homo_sapiensENSP0000027162830.424519.1038
ENSG00000143368homo_sapiensENSP0000035863520.224712.8411homo_sapiensENSP0000027162829.71718.8679
ENSG00000143368homo_sapiensENSP0000030801225.130913.8743homo_sapiensENSP0000027162822.641512.5
ENSG00000143368homo_sapiensENSP0000038526939.877324.5399homo_sapiensENSP0000027162830.660418.8679
ENSG00000143368homo_sapiensENSP0000026203130.958220.6388homo_sapiensENSP0000027162829.71719.8113
ENSG00000143368homo_sapiensENSP0000038622622.325612.3256homo_sapiensENSP0000027162822.641512.5
ENSG00000143368homo_sapiensENSP0000031174717.787711.2108homo_sapiensENSP0000027162828.06617.6887
ENSG00000143368homo_sapiensENSP0000034853829.288719.2469homo_sapiensENSP0000027162816.509410.8491
ENSG00000143368homo_sapiensENSP0000036088937.158523.224homo_sapiensENSP0000027162832.075520.0472
ENSG00000143368homo_sapiensENSP0000036834131.779721.6102homo_sapiensENSP0000027162817.688712.0283
ENSG00000143368homo_sapiensENSP0000038047938.440123.6769homo_sapiensENSP0000027162832.547220.0472
ENSG00000143368homo_sapiensENSP0000046323328.918916.4865homo_sapiensENSP0000027162825.235814.3868
ENSG00000143368homo_sapiensENSP0000036194921.969713.7879homo_sapiensENSP0000027162834.198121.4623
ENSG00000143368homo_sapiensENSP0000043435922.361412.7013homo_sapiensENSP0000027162829.481116.7453
ENSG00000143368homo_sapiensENSP0000037327728.604118.9931homo_sapiensENSP0000027162829.481119.5755
ENSG00000143368homo_sapiensENSP0000024018521.25612.3188homo_sapiensENSP0000027162820.754712.0283
ENSG00000143368homo_sapiensENSP0000021707323.101815.3473homo_sapiensENSP0000027162833.726422.4057
ENSG00000143368homo_sapiensENSP0000036262127.516.5homo_sapiensENSP0000027162812.97177.78302
ENSG00000143368homo_sapiensENSP0000036261827.516.5homo_sapiensENSP0000027162812.97177.78302

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000143368homo_sapiensENSP0000027162874.764270.0472nomascus_leucogenysENSNLEP0000001179591.884186.087
ENSG00000143368homo_sapiensENSP00000271628100100pan_paniscusENSPPAP00000036260100100
ENSG00000143368homo_sapiensENSP00000271628100100pongo_abeliiENSPPYP00000001065100100
ENSG00000143368homo_sapiensENSP00000271628100100pan_troglodytesENSPTRP00000002107100100
ENSG00000143368homo_sapiensENSP00000271628100100gorilla_gorillaENSGGOP00000004665100100
ENSG00000143368homo_sapiensENSP0000027162867.924564.3868ornithorhynchus_anatinusENSOANP0000003416753.234750.4621
ENSG00000143368homo_sapiensENSP0000027162877.122676.8868notamacropus_eugeniiENSMEUP0000000298381.343381.0945
ENSG00000143368homo_sapiensENSP0000027162881.367978.3019dasypus_novemcinctusENSDNOP0000002090987.341884.0506
ENSG00000143368homo_sapiensENSP0000027162895.990695.0472dasypus_novemcinctusENSDNOP0000002556397.368496.4115
ENSG00000143368homo_sapiensENSP0000027162890.094390.0943echinops_telfairiENSETEP0000000727890.307390.3073
ENSG00000143368homo_sapiensENSP0000027162810099.7642callithrix_jacchusENSCJAP0000006642810099.7642
ENSG00000143368homo_sapiensENSP00000271628100100cercocebus_atysENSCATP00000018582100100
ENSG00000143368homo_sapiensENSP00000271628100100macaca_fascicularisENSMFAP00000030430100100
ENSG00000143368homo_sapiensENSP00000271628100100macaca_mulattaENSMMUP00000009515100100
ENSG00000143368homo_sapiensENSP00000271628100100macaca_nemestrinaENSMNEP00000015484100100
ENSG00000143368homo_sapiensENSP00000271628100100papio_anubisENSPANP00000002232100100
ENSG00000143368homo_sapiensENSP00000271628100100mandrillus_leucophaeusENSMLEP00000028918100100
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642tursiops_truncatusENSTTRP0000000491599.764299.7642
ENSG00000143368homo_sapiensENSP0000027162891.037791.0377vulpes_vulpesENSVVUP0000001046198.721298.7212
ENSG00000143368homo_sapiensENSP0000027162870.990667.6887vulpes_vulpesENSVVUP0000003113563.102760.1677
ENSG00000143368homo_sapiensENSP0000027162899.764299.5283mus_spretusMGP_SPRETEiJ_P006167899.764299.5283
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642equus_asinusENSEASP0000500186099.764299.7642
ENSG00000143368homo_sapiensENSP0000027162866.981163.9151capra_hircusENSCHIP0000000286977.384273.842
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642capra_hircusENSCHIP0000003121199.764299.7642
ENSG00000143368homo_sapiensENSP0000027162899.528399.5283loxodonta_africanaENSLAFP0000000716499.294199.2941
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642panthera_leoENSPLOP0000002414699.764299.7642
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642ailuropoda_melanoleucaENSAMEP0000001058599.764299.7642
ENSG00000143368homo_sapiensENSP0000027162891.981191.9811bos_indicus_hybridENSBIXP0000503834393.975993.9759
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642bos_indicus_hybridENSBIXP0000504219399.764299.7642
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642oryctolagus_cuniculusENSOCUP0000000397699.764299.7642
ENSG00000143368homo_sapiensENSP0000027162899.528399.2924canis_lupus_familiarisENSCAFP0084501697299.528399.2924
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642panthera_pardusENSPPRP0000001451799.764299.7642
ENSG00000143368homo_sapiensENSP0000027162839.858537.0283marmota_marmota_marmotaENSMMMP0000000996484.578.5
ENSG00000143368homo_sapiensENSP0000027162896.698196.6981marmota_marmota_marmotaENSMMMP0000002231296.926796.9267
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642balaenoptera_musculusENSBMSP0001000531699.764299.7642
ENSG00000143368homo_sapiensENSP0000027162899.528399.5283cavia_porcellusENSCPOP0000000743299.528399.5283
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642felis_catusENSFCAP0000000938199.764299.7642
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642ursus_americanusENSUAMP0000002914499.764299.7642
ENSG00000143368homo_sapiensENSP0000027162897.877496.934monodelphis_domesticaENSMODP0000005930792.841291.9463
ENSG00000143368homo_sapiensENSP0000027162826.415126.1792bison_bison_bisonENSBBBP0000000775591.056990.2439
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642bison_bison_bisonENSBBBP0000001560499.764299.7642
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642monodon_monocerosENSMMNP0001500059199.764299.7642
ENSG00000143368homo_sapiensENSP0000027162899.528399.5283sus_scrofaENSSSCP0000000710899.528399.5283
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642microcebus_murinusENSMICP0000004903999.764299.7642
ENSG00000143368homo_sapiensENSP0000027162879.71776.6509octodon_degusENSODEP0000000473088.250784.8564
ENSG00000143368homo_sapiensENSP0000027162868.160465.3302octodon_degusENSODEP0000001202383.04679.5977
ENSG00000143368homo_sapiensENSP0000027162854.481154.2453jaculus_jaculusENSJJAP0000002244398.717998.2906
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642ovis_aries_rambouilletENSOARP0002000901599.764299.7642
ENSG00000143368homo_sapiensENSP0000027162898.820898.5849ursus_maritimusENSUMAP0000000474299.289199.0521
ENSG00000143368homo_sapiensENSP0000027162896.698196.4623ochotona_princepsENSOPRP0000000986997.156496.9194
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642delphinapterus_leucasENSDLEP0000001378899.764299.7642
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642physeter_catodonENSPCTP0000501557999.764299.7642
ENSG00000143368homo_sapiensENSP0000027162899.528399.2924mus_caroliMGP_CAROLIEiJ_P005930199.528399.2924
ENSG00000143368homo_sapiensENSP0000027162899.764299.5283mus_musculusENSMUSP0000007570999.764299.5283
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642dipodomys_ordiiENSDORP0000001540099.764299.7642
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642mustela_putorius_furoENSMPUP0000000552199.764299.7642
ENSG00000143368homo_sapiensENSP00000271628100100aotus_nancymaaeENSANAP00000026605100100
ENSG00000143368homo_sapiensENSP0000027162873.820870.7547saimiri_boliviensis_boliviensisENSSBOP0000001703079.643876.3359
ENSG00000143368homo_sapiensENSP0000027162810099.7642saimiri_boliviensis_boliviensisENSSBOP0000000236710099.7642
ENSG00000143368homo_sapiensENSP0000027162896.93496.934vicugna_pacosENSVPAP0000000758799.757399.7573
ENSG00000143368homo_sapiensENSP00000271628100100chlorocebus_sabaeusENSCSAP00000014147100100
ENSG00000143368homo_sapiensENSP0000027162899.764299.5283mesocricetus_auratusENSMAUP0000001594999.764299.5283
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642phocoena_sinusENSPSNP0000000160099.764299.7642
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642camelus_dromedariusENSCDRP0000502264699.764299.7642
ENSG00000143368homo_sapiensENSP00000271628100100carlito_syrichtaENSTSYP00000008533100100
ENSG00000143368homo_sapiensENSP0000027162899.528399.2924panthera_tigris_altaicaENSPTIP0000001546299.528399.2924
ENSG00000143368homo_sapiensENSP0000027162897.877497.4057rattus_norvegicusENSRNOP0000002875896.736696.2704
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642prolemur_simusENSPSMP0000000376499.764299.7642
ENSG00000143368homo_sapiensENSP0000027162892.688792.217microtus_ochrogasterENSMOCP0000001475397.277296.7822
ENSG00000143368homo_sapiensENSP0000027162899.764299.5283microtus_ochrogasterENSMOCP0000001403799.764299.5283
ENSG00000143368homo_sapiensENSP0000027162899.764299.5283peromyscus_maniculatus_bairdiiENSPEMP0000001920099.764299.5283
ENSG00000143368homo_sapiensENSP0000027162875.943473.3491bos_mutusENSBMUP0000001277281.725978.934
ENSG00000143368homo_sapiensENSP0000027162899.292499.2924bos_mutusENSBMUP0000003119499.292499.2924
ENSG00000143368homo_sapiensENSP0000027162899.764299.5283mus_spicilegusENSMSIP0000000907199.764299.5283
ENSG00000143368homo_sapiensENSP0000027162899.764299.5283cricetulus_griseus_chok1gshdENSCGRP0000100306099.764299.5283
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642pteropus_vampyrusENSPVAP0000001335499.764299.7642
ENSG00000143368homo_sapiensENSP0000027162899.764299.5283myotis_lucifugusENSMLUP0000000982499.764299.5283
ENSG00000143368homo_sapiensENSP0000027162899.528399.0566vombatus_ursinusENSVURP0001000108599.528399.0566
ENSG00000143368homo_sapiensENSP0000027162899.528399.0566vombatus_ursinusENSVURP0001002059499.528399.0566
ENSG00000143368homo_sapiensENSP0000027162899.528398.8208rhinolophus_ferrumequinumENSRFEP0001002957899.528398.8208
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642neovison_visonENSNVIP0000000394399.764299.7642
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642bos_taurusENSBTAP0000001657799.764299.7642
ENSG00000143368homo_sapiensENSP0000027162887.028387.0283bos_taurusENSBTAP0000005927090.663490.6634
ENSG00000143368homo_sapiensENSP0000027162899.528399.5283heterocephalus_glaber_femaleENSHGLP0000001725890.36490.364
ENSG00000143368homo_sapiensENSP0000027162892.924592.4528heterocephalus_glaber_femaleENSHGLP0000003633792.924592.4528
ENSG00000143368homo_sapiensENSP0000027162899.056699.0566rhinopithecus_bietiENSRBIP0000003989598.823598.8235
ENSG00000143368homo_sapiensENSP0000027162899.528399.2924canis_lupus_dingoENSCAFP0002002514999.528399.2924
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642sciurus_vulgarisENSSVLP0000500039199.764299.7642
ENSG00000143368homo_sapiensENSP0000027162899.528399.0566phascolarctos_cinereusENSPCIP0000001081699.528399.0566
ENSG00000143368homo_sapiensENSP0000027162867.21767.217procavia_capensisENSPCAP0000000037068.181868.1818
ENSG00000143368homo_sapiensENSP0000027162899.528399.2924nannospalax_galiliENSNGAP0000001526299.528399.2924
ENSG00000143368homo_sapiensENSP0000027162893.160492.6887bos_grunniensENSBGRP0000000081987.973387.5278
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642bos_grunniensENSBGRP0000002660799.764299.7642
ENSG00000143368homo_sapiensENSP0000027162899.528399.5283chinchilla_lanigeraENSCLAP0000002309099.528399.5283
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642cervus_hanglu_yarkandensisENSCHYP0000002194499.764299.7642
ENSG00000143368homo_sapiensENSP0000027162895.047294.1038cervus_hanglu_yarkandensisENSCHYP0000002074195.047294.1038
ENSG00000143368homo_sapiensENSP0000027162899.528399.5283catagonus_wagneriENSCWAP0000001318499.528399.5283
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642ictidomys_tridecemlineatusENSSTOP0000000061299.764299.7642
ENSG00000143368homo_sapiensENSP0000027162873.349170.0472ictidomys_tridecemlineatusENSSTOP0000002861976.60173.1527
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642otolemur_garnettiiENSOGAP0000000559599.764299.7642
ENSG00000143368homo_sapiensENSP0000027162894.575594.5755cebus_imitatorENSCCAP0000000803390.519290.5192
ENSG00000143368homo_sapiensENSP0000027162885.377483.0189cebus_imitatorENSCCAP0000000457985.985783.6105
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642urocitellus_parryiiENSUPAP0001000185099.764299.7642
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642moschus_moschiferusENSMMSP0000002807699.764299.7642
ENSG00000143368homo_sapiensENSP00000271628100100rhinopithecus_roxellanaENSRROP00000009884100100
ENSG00000143368homo_sapiensENSP0000027162899.764299.5283mus_pahariMGP_PahariEiJ_P007026199.764299.5283
ENSG00000143368homo_sapiensENSP0000027162899.764299.7642propithecus_coquereliENSPCOP0000000823399.764299.7642
ENSG00000143368homo_sapiensENSP0000027162863.679256.8396caenorhabditis_elegansC08B11.5.169.587662.1134
ENSG00000143368homo_sapiensENSP0000027162861.084955.4245drosophila_melanogasterFBpp007085974.639867.7233
ENSG00000143368homo_sapiensENSP0000027162865.801960.8491ciona_intestinalisENSCINP0000000481874.468.8
ENSG00000143368homo_sapiensENSP0000027162875.943471.934petromyzon_marinusENSPMAP0000000862975.943471.934
ENSG00000143368homo_sapiensENSP0000027162861.792558.2547eptatretus_burgeriENSEBUP0000001791074.22169.9717
ENSG00000143368homo_sapiensENSP0000027162873.820870.7547latimeria_chalumnaeENSLACP0000000498986.225982.6446
ENSG00000143368homo_sapiensENSP0000027162885.613280.6604lepisosteus_oculatusENSLOCP0000001102486.01981.0427
ENSG00000143368homo_sapiensENSP0000027162877.830274.2924clupea_harengusENSCHAP0000001294982.089678.3582
ENSG00000143368homo_sapiensENSP0000027162879.481176.4151danio_rerioENSDARP0000002275984.2581
ENSG00000143368homo_sapiensENSP0000027162878.301973.3491carassius_auratusENSCARP0000005837977.751872.8337
ENSG00000143368homo_sapiensENSP0000027162878.537775.2358carassius_auratusENSCARP0000003674384.517880.9645
ENSG00000143368homo_sapiensENSP0000027162880.188776.1792astyanax_mexicanusENSAMXP0000000851584.78880.5486
ENSG00000143368homo_sapiensENSP0000027162878.06675ictalurus_punctatusENSIPUP0000001806680.929177.7506
ENSG00000143368homo_sapiensENSP0000027162879.245375esox_luciusENSELUP0000001267484.634880.1008
ENSG00000143368homo_sapiensENSP0000027162880.660476.8868electrophorus_electricusENSEEEP0000005084084.653580.6931
ENSG00000143368homo_sapiensENSP0000027162863.443459.9057oncorhynchus_kisutchENSOKIP0000506632770.603766.6667
ENSG00000143368homo_sapiensENSP0000027162880.660476.4151oncorhynchus_kisutchENSOKIP0000503559685.581
ENSG00000143368homo_sapiensENSP0000027162880.896276.6509oncorhynchus_mykissENSOMYP0000006887885.7581.25
ENSG00000143368homo_sapiensENSP0000027162863.207559.1981oncorhynchus_mykissENSOMYP0000002580770.526366.0526
ENSG00000143368homo_sapiensENSP0000027162875.943472.6415salmo_salarENSSSAP0000001535478.921675.4902
ENSG00000143368homo_sapiensENSP0000027162872.169865.566salmo_salarENSSSAP0000002254174.271867.4757
ENSG00000143368homo_sapiensENSP0000027162880.660476.4151salmo_truttaENSSTUP0000006302985.929681.407
ENSG00000143368homo_sapiensENSP0000027162880.896276.6509salmo_truttaENSSTUP0000010825485.7581.25
ENSG00000143368homo_sapiensENSP0000027162879.71775.7076gadus_morhuaENSGMOP0000000265384.924680.6533
ENSG00000143368homo_sapiensENSP0000027162877.358573.5849fundulus_heteroclitusENSFHEP0000000713147.605245.283
ENSG00000143368homo_sapiensENSP0000027162872.405767.4528poecilia_reticulataENSPREP0000001637776.178770.9677
ENSG00000143368homo_sapiensENSP0000027162879.009475.2358xiphophorus_maculatusENSXMAP0000000378985.677781.5857
ENSG00000143368homo_sapiensENSP0000027162877.830274.0566oryzias_latipesENSORLP0000000382082.706878.6967
ENSG00000143368homo_sapiensENSP0000027162878.537774.7642cyclopterus_lumpusENSCLMP0000500408484.732880.6616
ENSG00000143368homo_sapiensENSP0000027162872.169866.2736oreochromis_niloticusENSONIP0000000342272.684166.7458
ENSG00000143368homo_sapiensENSP0000027162880.188776.1792haplochromis_burtoniENSHBUP0000002200684.78880.5486
ENSG00000143368homo_sapiensENSP0000027162880.188776.1792astatotilapia_callipteraENSACLP0000002096384.78880.5486
ENSG00000143368homo_sapiensENSP0000027162880.188776.1792sparus_aurataENSSAUP0001000279485.427181.1558
ENSG00000143368homo_sapiensENSP0000027162880.660476.8868lates_calcariferENSLCAP0001003045984.863580.8933
ENSG00000143368homo_sapiensENSP0000027162878.06674.5283xenopus_tropicalisENSXETP0000005909681.127477.451
ENSG00000143368homo_sapiensENSP0000027162890.801988.9151chrysemys_picta_belliiENSCPBP0000001046992.105390.1914
ENSG00000143368homo_sapiensENSP0000027162881.603879.9528sphenodon_punctatusENSSPUP0000000128886.716884.9624
ENSG00000143368homo_sapiensENSP0000027162890.56688.6792crocodylus_porosusENSCPRP0000501279292.086390.1679
ENSG00000143368homo_sapiensENSP0000027162890.094387.9717laticauda_laticaudataENSLLTP0000002045683.224481.2636
ENSG00000143368homo_sapiensENSP0000027162891.037788.9151notechis_scutatusENSNSUP0000001088192.565990.4077
ENSG00000143368homo_sapiensENSP0000027162891.037788.9151pseudonaja_textilisENSPTXP0000001381092.565990.4077
ENSG00000143368homo_sapiensENSP0000027162871.462368.6321anas_platyrhynchos_platyrhynchosENSAPLP0000003109782.786979.5082
ENSG00000143368homo_sapiensENSP0000027162890.094387.9717gallus_gallusENSGALP0001004299491.387689.2345
ENSG00000143368homo_sapiensENSP0000027162881.367978.3019meleagris_gallopavoENSMGAP0000002014060.526358.2456
ENSG00000143368homo_sapiensENSP0000027162867.21765.8019serinus_canariaENSSCAP0000001608865.972264.5833
ENSG00000143368homo_sapiensENSP0000027162890.330288.2076parus_majorENSPMJP0000000201371.322269.6462
ENSG00000143368homo_sapiensENSP0000027162879.245375.7076anolis_carolinensisENSACAP0000003215779.620876.0664
ENSG00000143368homo_sapiensENSP0000027162871.93466.0377neolamprologus_brichardiENSNBRP0000001798273.671567.6329
ENSG00000143368homo_sapiensENSP0000027162891.037788.9151naja_najaENSNNAP0000002450492.565990.4077
ENSG00000143368homo_sapiensENSP0000027162879.481175.9434podarcis_muralisENSPMRP0000002781568.775565.7143
ENSG00000143368homo_sapiensENSP0000027162866.509463.2075taeniopygia_guttataENSTGUP0000002496940.869638.8406
ENSG00000143368homo_sapiensENSP0000027162885.141580.6604erpetoichthys_calabaricusENSECRP0000000203784.149279.7203
ENSG00000143368homo_sapiensENSP0000027162878.773674.7642kryptolebias_marmoratusENSKMAP0000001086084.987380.6616
ENSG00000143368homo_sapiensENSP0000027162891.037788.2076salvator_merianaeENSSMRP0000000990592.565989.6882
ENSG00000143368homo_sapiensENSP0000027162878.06673.8208oryzias_javanicusENSOJAP0000004518483.375378.8413
ENSG00000143368homo_sapiensENSP0000027162869.811366.9811amphilophus_citrinellusENSACIP0000002376788.095284.5238
ENSG00000143368homo_sapiensENSP0000027162879.952876.1792dicentrarchus_labraxENSDLAP0000508006576.523772.912
ENSG00000143368homo_sapiensENSP0000027162881.132177.1226amphiprion_perculaENSAPEP000000145338681.75
ENSG00000143368homo_sapiensENSP0000027162877.594373.8208oryzias_sinensisENSOSIP0000003864782.456178.4461
ENSG00000143368homo_sapiensENSP0000027162854.481152.8302pelodiscus_sinensisENSPSIP0000001053584.926582.3529
ENSG00000143368homo_sapiensENSP0000027162890.56688.6792gopherus_evgoodeiENSGEVP0000501857591.86689.9522
ENSG00000143368homo_sapiensENSP0000027162890.56688.6792chelonoidis_abingdoniiENSCABP0000002492791.86689.9522
ENSG00000143368homo_sapiensENSP0000027162880.424576.4151seriola_dumeriliENSSDUP0000001650384.615480.397
ENSG00000143368homo_sapiensENSP0000027162880.188776.1792cottoperca_gobioENSCGOP0000001756384.78880.5486
ENSG00000143368homo_sapiensENSP0000027162871.226468.8679struthio_camelus_australisENSSCUP0000000023486.039983.1909
ENSG00000143368homo_sapiensENSP0000027162873.113271.4623anser_brachyrhynchusENSABRP0000000960789.855187.8261
ENSG00000143368homo_sapiensENSP0000027162879.009474.7642gasterosteus_aculeatusENSGACP0000000503784.810180.2532
ENSG00000143368homo_sapiensENSP0000027162880.896277.3585cynoglossus_semilaevisENSCSEP0000002393371.607568.476
ENSG00000143368homo_sapiensENSP0000027162879.009475poecilia_formosaENSPFOP0000000567985.025480.7107
ENSG00000143368homo_sapiensENSP0000027162881.367977.1226myripristis_murdjanENSMMDP0000500976485.607981.1414
ENSG00000143368homo_sapiensENSP0000027162879.952875.9434sander_luciopercaENSSLUP0000000327184.538780.2993
ENSG00000143368homo_sapiensENSP0000027162890.56688.4434strigops_habroptilaENSSHBP0000500789591.86689.7129
ENSG00000143368homo_sapiensENSP0000027162881.132177.1226amphiprion_ocellarisENSAOCP000000150828681.75
ENSG00000143368homo_sapiensENSP0000027162890.801988.9151terrapene_carolina_triunguisENSTMTP0000000452992.105390.1914
ENSG00000143368homo_sapiensENSP0000027162827.122625.9434hucho_huchoENSHHUP0000002013388.461584.6154
ENSG00000143368homo_sapiensENSP0000027162880.896276.6509hucho_huchoENSHHUP0000002616985.7581.25
ENSG00000143368homo_sapiensENSP0000027162879.952875.9434betta_splendensENSBSLP0000003824384.119179.9007
ENSG00000143368homo_sapiensENSP0000027162880.424576.6509pygocentrus_nattereriENSPNAP0000002357386.989882.9082
ENSG00000143368homo_sapiensENSP0000027162880.660476.4151anabas_testudineusENSATEP0000001843784.863580.397
ENSG00000143368homo_sapiensENSP0000027162847.877444.8113ciona_savignyiENSCSAVP0000001330567.441963.1229
ENSG00000143368homo_sapiensENSP0000027162828.301917.9245saccharomyces_cerevisiaeYOR319W56.33835.6808
ENSG00000143368homo_sapiensENSP0000027162880.660476.6509seriola_lalandi_dorsalisENSSLDP0000001806484.863580.6452
ENSG00000143368homo_sapiensENSP0000027162879.245375.7076labrus_bergyltaENSLBEP0000003576384.210580.4511
ENSG00000143368homo_sapiensENSP0000027162880.188776.1792pundamilia_nyerereiENSPNYP0000001676684.78880.5486
ENSG00000143368homo_sapiensENSP0000027162880.188776.6509mastacembelus_armatusENSMAMP0000002184185.21381.4536
ENSG00000143368homo_sapiensENSP0000027162880.424576.8868stegastes_partitusENSSPAP0000002541984.825981.0945
ENSG00000143368homo_sapiensENSP0000027162880.896276.6509oncorhynchus_tshawytschaENSOTSP0000501418585.7581.25
ENSG00000143368homo_sapiensENSP0000027162860.613258.4906oncorhynchus_tshawytschaENSOTSP0000508237676.261173.5905
ENSG00000143368homo_sapiensENSP0000027162881.132177.1226acanthochromis_polyacanthusENSAPOP000000147448681.75
ENSG00000143368homo_sapiensENSP0000027162881.132179.2453aquila_chrysaetos_chrysaetosENSACCP0002000375890.526388.4211
ENSG00000143368homo_sapiensENSP0000027162878.773674.2924nothobranchius_furzeriENSNFUP0001502775185.64180.7692
ENSG00000143368homo_sapiensENSP0000027162876.650972.4057cyprinodon_variegatusENSCVAP0000002271783.547678.9203
ENSG00000143368homo_sapiensENSP0000027162879.481175.2358denticeps_clupeoidesENSDCDP0000006245384.461279.9499
ENSG00000143368homo_sapiensENSP0000027162880.424576.8868larimichthys_croceaENSLCRP0000501842585.678481.9095
ENSG00000143368homo_sapiensENSP0000027162827.122620.9906takifugu_rubripesENSTRUP0000001071828.967322.4181
ENSG00000143368homo_sapiensENSP0000027162877.594374.5283hippocampus_comesENSHCOP0000000195982.456179.198
ENSG00000143368homo_sapiensENSP0000027162881.367977.3585cyprinus_carpio_carpioENSCCRP0000012486485.607981.3896
ENSG00000143368homo_sapiensENSP0000027162874.056669.5755cyprinus_carpio_carpioENSCCRP0000001956565.966461.9748
ENSG00000143368homo_sapiensENSP0000027162889.858587.5coturnix_japonicaENSCJPP0000501708491.148388.756
ENSG00000143368homo_sapiensENSP0000027162871.93468.3962poecilia_latipinnaENSPLAP0000000056584.254180.1105
ENSG00000143368homo_sapiensENSP0000027162868.396263.9151sinocyclocheilus_grahamiENSSGRP0000001187679.670374.4505
ENSG00000143368homo_sapiensENSP0000027162852.358550.4717sinocyclocheilus_grahamiENSSGRP0000000200695.27991.8455
ENSG00000143368homo_sapiensENSP0000027162880.188776.1792maylandia_zebraENSMZEP0000503581484.78880.5486
ENSG00000143368homo_sapiensENSP0000027162876.179272.4057tetraodon_nigroviridisENSTNIP0000001201782.608778.5166
ENSG00000143368homo_sapiensENSP0000027162881.367977.1226paramormyrops_kingsleyaeENSPKIP0000000298486.466281.9549
ENSG00000143368homo_sapiensENSP0000027162881.367977.8302scleropages_formosusENSSFOP0001501372585.607981.8859
ENSG00000143368homo_sapiensENSP0000027162879.009476.1792leptobrachium_leishanenseENSLLEP0000004556475.450472.7477
ENSG00000143368homo_sapiensENSP0000027162879.71775.7076scophthalmus_maximusENSSMAP0000001107084.580.25
ENSG00000143368homo_sapiensENSP0000027162877.830273.3491oryzias_melastigmaENSOMEP0000001232783.123478.3375

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000375involved_in RNA splicing, via transesterification reactions1TASHomo_sapiens(9606)Process
GO:0000398involved_in mRNA splicing, via spliceosome3IC,IDA,NASHomo_sapiens(9606)Process
GO:0003723enables RNA binding2HDA,IBAHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005634located_in nucleus2IDA,NASHomo_sapiens(9606)Component
GO:0005654located_in nucleoplasm1TASHomo_sapiens(9606)Component
GO:0005681part_of spliceosomal complex2IDA,NASHomo_sapiens(9606)Component
GO:0005684part_of U2-type spliceosomal complex1IPIHomo_sapiens(9606)Component
GO:0005686part_of U2 snRNP2IBA,NASHomo_sapiens(9606)Component
GO:0005689part_of U12-type spliceosomal complex2IBA,IDAHomo_sapiens(9606)Component
GO:0006397involved_in mRNA processing1TASHomo_sapiens(9606)Process
GO:0008380involved_in RNA splicing1TASHomo_sapiens(9606)Process
GO:0048026involved_in positive regulation of mRNA splicing, via spliceosome1IBAHomo_sapiens(9606)Process
GO:0071005part_of U2-type precatalytic spliceosome1IDAHomo_sapiens(9606)Component
GO:1903241involved_in U2-type prespliceosome assembly1NASHomo_sapiens(9606)Process
GO:1990935enables splicing factor binding1IDAHomo_sapiens(9606)Function

Expression