Functions and Diseases

RBP Type Canonical_RBPs
Diseases CancerSARS-COV-OC43FlavivirusesSARS-COV-2Dengue
Drug N.A.
Main interacting RNAs ncRNA
Moonlighting functions N.A.
Localizations Stress granucleFibrillar center
BulkPerturb-seq DataSet_02_72

Description

Ensembl ID ENSG00000121390 Gene ID 55269 Accession 20320
Symbol PSPC1 Alias PSP1 Full Name paraspeckle component 1
Status Confidence Length 108264 bases Strand Minus strand
Position 13 : 19674756 - 19783019 RNA binding domain RRM_1
Summary This gene encodes a nucleolar protein that localizes to punctate subnuclear structures that occur close to splicing speckles, known as paraspeckles. These paraspeckles are composed of RNA-protein structures that include a non-coding RNA, NEAT1/Men epsilon/beta, and the Drosophila Behavior Human Splicing family of proteins, which include the product of this gene and the P54NRB/NONO and PSF/SFPQ proteins. Paraspeckles may function in the control of gene expression via an RNA nuclear retention mechanism. The protein encoded by this gene is found in paraspeckles in transcriptionally active cells, but it localizes to unique cap structures at the nucleolar periphery when RNA polymerase II transcription is inhibited, or during telophase. Alternative splicing of this gene results in multiple transcript variants. A related pseudogene, which is also located on chromosome 13, has been identified. [provided by RefSeq, Aug 2011]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000393069 RRM_1 PF00076 1.1e-32 1
ENSP00000393069 RRM_1 PF00076 1.1e-32 2
ENSP00000435921 RRM_1 PF00076 4.1e-32 1
ENSP00000435921 RRM_1 PF00076 4.1e-32 2
ENSP00000436038 RRM_1 PF00076 4.1e-32 1
ENSP00000436038 RRM_1 PF00076 4.1e-32 2
ENSP00000343966 RRM_1 PF00076 9.9e-32 1
ENSP00000343966 RRM_1 PF00076 9.9e-32 2
ENSP00000481916 RRM_1 PF00076 9.9e-32 1
ENSP00000481916 RRM_1 PF00076 9.9e-32 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal
37369679 K235 acetylation couples with PSPC1 to regulate the m6A demethylation activity of ALKBH5 and tumorigenesis. Xiao-Lan Zhang 2023-06-27 Nature communications
37121974 DDIAS, DNA damage-induced apoptosis suppressor, is a potential therapeutic target in cancer. Joo-Young Im 2023-05-01 Experimental & molecular medicine
19720872 Paraspeckles: nuclear bodies built on long noncoding RNA. S Charles Bond 2009-09-07 The Journal of cell biology
33085059 The function and regulation of TET2 in innate immunity and inflammation. Boyi Cong 2021-03-01 Protein & cell
24819514 Paraspeckle protein 1 (PSPC1) is involved in the cisplatin induced DNA damage response--role in G1/S checkpoint. Xiangjing Gao 2014-01-01 PloS one
35159097 Dissecting TET2 Regulatory Networks in Blood Differentiation and Cancer. Aleksey Lazarenkov 2022-02-06 Cancers
34017357 Epigenetic Regulation of Genomic Stability by Vitamin C. P John Brabson 2021-01-01 Frontiers in genetics
29483655 RNA-dependent chromatin targeting of TET2 for endogenous retrovirus control in pluripotent stem cells. Diana Guallar 2018-03-01 Nature genetics
34904671 Structural basis of dimerization and nucleic acid binding of human DBHS proteins NONO and PSPC1. J Gavin Knott 2022-01-11 Nucleic acids research
36077510 Transcriptional Regulation of Endogenous Retroviruses and Their Misregulation in Human Diseases. Qian Zhang 2022-09-04 International journal of molecular sciences

Transcripts

Name Transcript ID bp Protein Translation ID
PSPC1-205 ENST00000497722 448 No protein -
PSPC1-207 ENST00000635251 2285 No protein -
PSPC1-203 ENST00000471658 1647 393aa ENSP00000436038
PSPC1-204 ENST00000492741 1709 393aa ENSP00000435921
PSPC1-208 ENST00000635562 422 33aa ENSP00000488975
PSPC1-201 ENST00000338910 2435 523aa ENSP00000343966
PSPC1-206 ENST00000619300 2013 523aa ENSP00000481916
PSPC1-202 ENST00000427943 866 248aa ENSP00000393069

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
64842Methadone9E-628115739
64843Opioid-Related Disorders9E-628115739

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000121390homo_sapiensENSP0000027607971.974560.7219homo_sapiensENSP0000034396664.818454.6845
ENSG00000121390homo_sapiensENSP0000029442817.800310.9986homo_sapiensENSP0000034396623.518214.5315
ENSG00000121390homo_sapiensENSP0000045454515.6188.08989homo_sapiensENSP0000034396626.577413.7667
ENSG00000121390homo_sapiensENSP000003649125.977073.41157homo_sapiensENSP0000034396641.873823.9006
ENSG00000121390homo_sapiensENSP0000035879914.12497.88127homo_sapiensENSP0000034396626.386214.7228
ENSG00000121390homo_sapiensENSP0000048227719.756412.1786homo_sapiensENSP0000034396627.915917.2084
ENSG00000121390homo_sapiensENSP0000034974851.060842.0085homo_sapiensENSP0000034396669.024956.7878

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000121390homo_sapiensENSP0000034396699.04499.044nomascus_leucogenysENSNLEP0000000156599.233799.2337
ENSG00000121390homo_sapiensENSP0000034396684.512484.5124pan_paniscusENSPPAP0000000229099.774399.7743
ENSG00000121390homo_sapiensENSP0000034396699.617699.6176pongo_abeliiENSPPYP0000000590786.258386.2583
ENSG00000121390homo_sapiensENSP0000034396696.558396.5583pan_troglodytesENSPTRP0000000968699.409499.4094
ENSG00000121390homo_sapiensENSP0000034396610099.8088gorilla_gorillaENSGGOP0000000335610099.8088
ENSG00000121390homo_sapiensENSP0000034396697.131995.4111ornithorhynchus_anatinusENSOANP0000001434791.696890.0722
ENSG00000121390homo_sapiensENSP0000034396621.223717.5908ornithorhynchus_anatinusENSOANP0000003369872.54960.1307
ENSG00000121390homo_sapiensENSP0000034396687.571785.6597sarcophilus_harrisiiENSSHAP0000000537596.218594.1176
ENSG00000121390homo_sapiensENSP0000034396677.055575.3346notamacropus_eugeniiENSMEUP0000000044477.203175.4789
ENSG00000121390homo_sapiensENSP0000034396693.49992.3518choloepus_hoffmanniENSCHOP0000000788893.85892.7063
ENSG00000121390homo_sapiensENSP0000034396697.514395.9847dasypus_novemcinctusENSDNOP0000000859397.514395.9847
ENSG00000121390homo_sapiensENSP0000034396666.156864.6272erinaceus_europaeusENSEEUP0000001029067.446465.8869
ENSG00000121390homo_sapiensENSP0000034396650.095649.7132echinops_telfairiENSETEP0000000040165.664265.1629
ENSG00000121390homo_sapiensENSP0000034396698.661698.6616callithrix_jacchusENSCJAP0000000829999.040399.0403
ENSG00000121390homo_sapiensENSP0000034396699.04498.8528cercocebus_atysENSCATP0000002598999.04498.8528
ENSG00000121390homo_sapiensENSP0000034396699.04498.6616macaca_fascicularisENSMFAP0000001949299.233798.8506
ENSG00000121390homo_sapiensENSP0000034396699.235298.8528macaca_mulattaENSMMUP0000003649599.235298.8528
ENSG00000121390homo_sapiensENSP0000034396699.235298.8528macaca_nemestrinaENSMNEP0000000642699.235298.8528
ENSG00000121390homo_sapiensENSP0000034396699.235299.044papio_anubisENSPANP0000000988599.235299.044
ENSG00000121390homo_sapiensENSP0000034396681.070780.8795mandrillus_leucophaeusENSMLEP0000002969499.764799.5294
ENSG00000121390homo_sapiensENSP0000034396697.131996.9407tursiops_truncatusENSTTRP0000000313197.880597.6879
ENSG00000121390homo_sapiensENSP0000034396698.661698.6616vulpes_vulpesENSVVUP0000000854499.040399.0403
ENSG00000121390homo_sapiensENSP0000034396698.08897.1319mus_spretusMGP_SPRETEiJ_P003866398.08897.1319
ENSG00000121390homo_sapiensENSP0000034396690.822289.8662equus_asinusENSEASP0000500007396.153895.1417
ENSG00000121390homo_sapiensENSP0000034396696.749595.9847capra_hircusENSCHIP0000001645897.307796.5385
ENSG00000121390homo_sapiensENSP0000034396696.940795.6023loxodonta_africanaENSLAFP0000002342696.940795.6023
ENSG00000121390homo_sapiensENSP0000034396698.661698.6616panthera_leoENSPLOP0000000636799.040399.0403
ENSG00000121390homo_sapiensENSP0000034396696.749595.9847bos_indicus_hybridENSBIXP0000500120597.307796.5385
ENSG00000121390homo_sapiensENSP0000034396694.072793.3078oryctolagus_cuniculusENSOCUP0000000533297.61996.8254
ENSG00000121390homo_sapiensENSP0000034396688.910187.3805equus_caballusENSECAP0000004659593.939492.3232
ENSG00000121390homo_sapiensENSP0000034396698.661698.6616canis_lupus_familiarisENSCAFP0084503304899.040399.0403
ENSG00000121390homo_sapiensENSP0000034396698.661698.6616panthera_pardusENSPPRP0000001659599.040399.0403
ENSG00000121390homo_sapiensENSP0000034396698.852898.088marmota_marmota_marmotaENSMMMP0000000994398.852898.088
ENSG00000121390homo_sapiensENSP0000034396696.940796.5583balaenoptera_musculusENSBMSP0001003091797.876497.4903
ENSG00000121390homo_sapiensENSP0000034396697.131996.1759cavia_porcellusENSCPOP0000003145997.692396.7308
ENSG00000121390homo_sapiensENSP0000034396698.661698.6616felis_catusENSFCAP0000002004699.040399.0403
ENSG00000121390homo_sapiensENSP0000034396665.965665.9656ursus_americanusENSUAMP0000001536898.853998.8539
ENSG00000121390homo_sapiensENSP0000034396697.896896.5583monodelphis_domesticaENSMODP0000000999481.658780.5423
ENSG00000121390homo_sapiensENSP0000034396685.468584.5124bison_bison_bisonENSBBBP0000002002193.514692.4686
ENSG00000121390homo_sapiensENSP0000034396697.131996.9407monodon_monocerosENSMMNP0001502008797.880597.6879
ENSG00000121390homo_sapiensENSP0000034396697.514397.1319sus_scrofaENSSSCP0000003223797.888797.5048
ENSG00000121390homo_sapiensENSP0000034396698.470498.2792microcebus_murinusENSMICP0000002337498.848498.6564
ENSG00000121390homo_sapiensENSP0000034396688.527786.0421octodon_degusENSODEP0000001047094.297491.6497
ENSG00000121390homo_sapiensENSP0000034396689.101387.5717octodon_degusENSODEP0000002571291.015689.4531
ENSG00000121390homo_sapiensENSP0000034396698.08896.9407jaculus_jaculusENSJJAP0000001650198.275997.1264
ENSG00000121390homo_sapiensENSP0000034396696.749595.9847ovis_aries_rambouilletENSOARP0002000678197.307796.5385
ENSG00000121390homo_sapiensENSP0000034396691.58791.587ursus_maritimusENSUMAP0000001904798.357398.3573
ENSG00000121390homo_sapiensENSP0000034396639.005738.8145ochotona_princepsENSOPRP0000000889662.96362.6543
ENSG00000121390homo_sapiensENSP0000034396697.131996.9407delphinapterus_leucasENSDLEP0000001874897.880597.6879
ENSG00000121390homo_sapiensENSP0000034396696.558396.1759physeter_catodonENSPCTP0000501253593.866293.4944
ENSG00000121390homo_sapiensENSP0000034396697.896897.1319mus_caroliMGP_CAROLIEiJ_P003693797.896897.1319
ENSG00000121390homo_sapiensENSP0000034396698.08897.3231mus_musculusENSMUSP0000002250798.08897.3231
ENSG00000121390homo_sapiensENSP0000034396696.175994.0727dipodomys_ordiiENSDORP0000001509697.480695.3488
ENSG00000121390homo_sapiensENSP0000034396698.470498.2792mustela_putorius_furoENSMPUP0000001324898.848498.6564
ENSG00000121390homo_sapiensENSP0000034396698.661698.6616aotus_nancymaaeENSANAP0000000009999.040399.0403
ENSG00000121390homo_sapiensENSP0000034396674.952272.0841saimiri_boliviensis_boliviensisENSSBOP0000002333786.343683.0396
ENSG00000121390homo_sapiensENSP0000034396676.099475.9082vicugna_pacosENSVPAP0000000933299.749499.4987
ENSG00000121390homo_sapiensENSP0000034396651.051650.6692chlorocebus_sabaeusENSCSAP0000001411410099.2509
ENSG00000121390homo_sapiensENSP0000034396677.820376.4818tupaia_belangeriENSTBEP0000000206579.647878.2779
ENSG00000121390homo_sapiensENSP0000034396682.21880.4971mesocricetus_auratusENSMAUP0000002411294.713792.7313
ENSG00000121390homo_sapiensENSP0000034396697.131996.9407phocoena_sinusENSPSNP0000000836997.880597.6879
ENSG00000121390homo_sapiensENSP0000034396682.791682.6004camelus_dromedariusENSCDRP0000502347889.278489.0722
ENSG00000121390homo_sapiensENSP0000034396675.334673.6138carlito_syrichtaENSTSYP0000001506787.946485.9375
ENSG00000121390homo_sapiensENSP0000034396683.747681.8356panthera_tigris_altaicaENSPTIP0000001895692.016889.916
ENSG00000121390homo_sapiensENSP0000034396697.705597.1319rattus_norvegicusENSRNOP0000002821997.892797.318
ENSG00000121390homo_sapiensENSP0000034396699.04498.8528prolemur_simusENSPSMP0000000008299.04498.8528
ENSG00000121390homo_sapiensENSP0000034396697.705596.9407microtus_ochrogasterENSMOCP0000000641297.892797.1264
ENSG00000121390homo_sapiensENSP0000034396691.013489.8662sorex_araneusENSSARP0000000081291.714890.5588
ENSG00000121390homo_sapiensENSP0000034396697.896897.3231peromyscus_maniculatus_bairdiiENSPEMP0000001576898.084397.5096
ENSG00000121390homo_sapiensENSP0000034396692.925492.3518bos_mutusENSBMUP0000002494593.461592.8846
ENSG00000121390homo_sapiensENSP0000034396698.08897.3231mus_spicilegusENSMSIP0000000556798.08897.3231
ENSG00000121390homo_sapiensENSP0000034396697.514396.7495cricetulus_griseus_chok1gshdENSCGRP0000101871397.701196.9349
ENSG00000121390homo_sapiensENSP0000034396696.749594.6463pteropus_vampyrusENSPVAP0000000476597.495295.3757
ENSG00000121390homo_sapiensENSP0000034396698.08897.1319myotis_lucifugusENSMLUP0000001611097.900896.9466
ENSG00000121390homo_sapiensENSP0000034396697.705596.5583vombatus_ursinusENSVURP0001002801197.892796.7433
ENSG00000121390homo_sapiensENSP0000034396697.323196.3671rhinolophus_ferrumequinumENSRFEP0001000321097.323196.3671
ENSG00000121390homo_sapiensENSP0000034396698.470498.2792neovison_visonENSNVIP0000002632998.848498.6564
ENSG00000121390homo_sapiensENSP0000034396696.749595.9847bos_taurusENSBTAP0000000513497.307796.5385
ENSG00000121390homo_sapiensENSP0000034396697.514396.9407heterocephalus_glaber_femaleENSHGLP0000002643898.076997.5
ENSG00000121390homo_sapiensENSP0000034396692.160692.1606rhinopithecus_bietiENSRBIP0000002432398.973398.9733
ENSG00000121390homo_sapiensENSP0000034396698.661698.6616canis_lupus_dingoENSCAFP0002000236199.040399.0403
ENSG00000121390homo_sapiensENSP0000034396698.852898.088sciurus_vulgarisENSSVLP0000501893698.852898.088
ENSG00000121390homo_sapiensENSP0000034396697.705596.5583phascolarctos_cinereusENSPCIP0000002334797.892796.7433
ENSG00000121390homo_sapiensENSP0000034396663.862362.9063procavia_capensisENSPCAP0000000776663.984763.0268
ENSG00000121390homo_sapiensENSP0000034396697.131996.9407nannospalax_galiliENSNGAP0000000821297.31897.1264
ENSG00000121390homo_sapiensENSP0000034396696.749595.9847bos_grunniensENSBGRP0000001595597.307796.5385
ENSG00000121390homo_sapiensENSP0000034396680.305977.8203chinchilla_lanigeraENSCLAP0000000746093.541290.6459
ENSG00000121390homo_sapiensENSP0000034396696.749595.9847cervus_hanglu_yarkandensisENSCHYP0000003633097.307796.5385
ENSG00000121390homo_sapiensENSP0000034396697.131996.7495catagonus_wagneriENSCWAP0000000906397.504897.1209
ENSG00000121390homo_sapiensENSP0000034396698.661697.8968ictidomys_tridecemlineatusENSSTOP0000003026898.661697.8968
ENSG00000121390homo_sapiensENSP0000034396698.852898.8528otolemur_garnettiiENSOGAP0000001132698.852898.8528
ENSG00000121390homo_sapiensENSP0000034396698.852898.6616cebus_imitatorENSCCAP0000003088399.232299.0403
ENSG00000121390homo_sapiensENSP0000034396698.661697.8968urocitellus_parryiiENSUPAP0001002371698.661697.8968
ENSG00000121390homo_sapiensENSP0000034396696.558395.7935moschus_moschiferusENSMMSP0000000554497.115496.3462
ENSG00000121390homo_sapiensENSP0000034396699.426499.4264rhinopithecus_roxellanaENSRROP0000002515499.426499.4264
ENSG00000121390homo_sapiensENSP0000034396697.896897.1319mus_pahariMGP_PahariEiJ_P008504897.896897.1319
ENSG00000121390homo_sapiensENSP0000034396694.455194.0727propithecus_coquereliENSPCOP0000000640498.210797.8131
ENSG00000121390homo_sapiensENSP0000034396639.579326.5774petromyzon_marinusENSPMAP0000000507762.917942.2492
ENSG00000121390homo_sapiensENSP0000034396673.231457.3614eptatretus_burgeriENSEBUP0000000594156.158443.9883
ENSG00000121390homo_sapiensENSP0000034396683.938874.9522callorhinchus_miliiENSCMIP0000001625377.288769.0141
ENSG00000121390homo_sapiensENSP0000034396686.615778.2027latimeria_chalumnaeENSLACP0000001222686.285777.9048
ENSG00000121390homo_sapiensENSP0000034396685.08676.673lepisosteus_oculatusENSLOCP0000001327787.426378.7819
ENSG00000121390homo_sapiensENSP0000034396678.585167.4952clupea_harengusENSCHAP0000000596877.110766.2289
ENSG00000121390homo_sapiensENSP0000034396677.820366.1568danio_rerioENSDARP0000009311179.492267.5781
ENSG00000121390homo_sapiensENSP0000034396673.422661.5679carassius_auratusENSCARP000000825947562.8906
ENSG00000121390homo_sapiensENSP0000034396680.688367.304astyanax_mexicanusENSAMXP0000005329879.622666.4151
ENSG00000121390homo_sapiensENSP0000034396679.732368.6424ictalurus_punctatusENSIPUP0000001948479.732368.6424
ENSG00000121390homo_sapiensENSP0000034396679.732369.0249esox_luciusENSELUP0000002746277.943967.4766
ENSG00000121390homo_sapiensENSP0000034396680.114769.0249electrophorus_electricusENSEEEP0000002436680.114769.0249
ENSG00000121390homo_sapiensENSP0000034396678.585168.0688oncorhynchus_kisutchENSOKIP0000503073374.863464.8452
ENSG00000121390homo_sapiensENSP0000034396678.585168.4512oncorhynchus_kisutchENSOKIP000050095457565.3285
ENSG00000121390homo_sapiensENSP0000034396678.393968.26oncorhynchus_mykissENSOMYP0000000464575.506465.7459
ENSG00000121390homo_sapiensENSP0000034396678.776368.8336oncorhynchus_mykissENSOMYP0000001867675.874866.2983
ENSG00000121390homo_sapiensENSP0000034396678.585168.4512salmo_salarENSSSAP0000003261375.412865.6881
ENSG00000121390homo_sapiensENSP0000034396671.892961.9503salmo_salarENSSSAP0000003262375.50265.0602
ENSG00000121390homo_sapiensENSP0000034396678.585167.8776salmo_truttaENSSTUP0000007305775.137164.8995
ENSG00000121390homo_sapiensENSP0000034396678.202768.0688salmo_truttaENSSTUP0000006774875.183865.4412
ENSG00000121390homo_sapiensENSP0000034396676.099465.7744gadus_morhuaENSGMOP0000002650173.027563.1193
ENSG00000121390homo_sapiensENSP0000034396615.8711.2811fundulus_heteroclitusENSFHEP0000002506461.940344.0299
ENSG00000121390homo_sapiensENSP0000034396621.606118.1644fundulus_heteroclitusENSFHEP0000000603283.088269.8529
ENSG00000121390homo_sapiensENSP0000034396674.187462.3327poecilia_reticulataENSPREP0000001141375.048463.0561
ENSG00000121390homo_sapiensENSP0000034396661.376751.2428xiphophorus_maculatusENSXMAP0000000795775.886563.357
ENSG00000121390homo_sapiensENSP0000034396673.422662.5239oryzias_latipesENSORLP0000000530075.889364.6245
ENSG00000121390homo_sapiensENSP0000034396673.231462.1415cyclopterus_lumpusENSCLMP0000500630775.393763.9764
ENSG00000121390homo_sapiensENSP0000034396676.481864.4359oreochromis_niloticusENSONIP0000001511877.369465.1838
ENSG00000121390homo_sapiensENSP0000034396675.908264.2447haplochromis_burtoniENSHBUP0000001404976.93865.1163
ENSG00000121390homo_sapiensENSP0000034396668.451256.0229astatotilapia_callipteraENSACLP0000004043171.887658.8353
ENSG00000121390homo_sapiensENSP0000034396674.378663.2887sparus_aurataENSSAUP0001006808173.954462.9278
ENSG00000121390homo_sapiensENSP0000034396672.466561.1855lates_calcariferENSLCAP0001004854175.049563.3663
ENSG00000121390homo_sapiensENSP0000034396684.321277.2467xenopus_tropicalisENSXETP0000008533885.299878.1431
ENSG00000121390homo_sapiensENSP0000034396690.439887.1893chrysemys_picta_belliiENSCPBP0000002959690.439887.1893
ENSG00000121390homo_sapiensENSP0000034396682.026877.6291sphenodon_punctatusENSSPUP0000001113486.317981.6901
ENSG00000121390homo_sapiensENSP0000034396690.057487.1893crocodylus_porosusENSCPRP0000501887486.263783.5165
ENSG00000121390homo_sapiensENSP0000034396667.30454.3021laticauda_laticaudataENSLLTP0000000855453.01242.7711
ENSG00000121390homo_sapiensENSP0000034396688.145384.13notechis_scutatusENSNSUP0000001840187.642683.6502
ENSG00000121390homo_sapiensENSP0000034396688.336584.5124pseudonaja_textilisENSPTXP0000000713387.832784.0304
ENSG00000121390homo_sapiensENSP0000034396690.439887.3805anas_platyrhynchos_platyrhynchosENSAPLP0000002829972.324269.8777
ENSG00000121390homo_sapiensENSP0000034396690.63187.7629gallus_gallusENSGALP0001000713490.63187.7629
ENSG00000121390homo_sapiensENSP0000034396643.212238.8145meleagris_gallopavoENSMGAP0000001604782.783974.359
ENSG00000121390homo_sapiensENSP0000034396690.822288.1453serinus_canariaENSSCAP0000000670790.132887.4763
ENSG00000121390homo_sapiensENSP0000034396690.63187.9541parus_majorENSPMJP0000002393189.943187.2865
ENSG00000121390homo_sapiensENSP0000034396689.292585.8509anolis_carolinensisENSACAP0000000206388.279884.8771
ENSG00000121390homo_sapiensENSP0000034396657.743847.0363neolamprologus_brichardiENSNBRP0000001823572.771159.2771
ENSG00000121390homo_sapiensENSP0000034396688.145384.13naja_najaENSNNAP0000000799987.642683.6502
ENSG00000121390homo_sapiensENSP0000034396690.057485.4685podarcis_muralisENSPMRP0000000469474.173270.3937
ENSG00000121390homo_sapiensENSP0000034396679.923576.8642geospiza_fortisENSGFOP0000001012884.444481.2121
ENSG00000121390homo_sapiensENSP0000034396690.248687.5717taeniopygia_guttataENSTGUP0000001165089.904887.2381
ENSG00000121390homo_sapiensENSP0000034396674.187464.8184erpetoichthys_calabaricusENSECRP0000000627884.347873.6957
ENSG00000121390homo_sapiensENSP0000034396659.84749.3308kryptolebias_marmoratusENSKMAP0000001821870.495558.1081
ENSG00000121390homo_sapiensENSP0000034396689.674985.4685salvator_merianaeENSSMRP0000001938488.657884.4991
ENSG00000121390homo_sapiensENSP0000034396673.996262.3327oryzias_javanicusENSOJAP0000000122976.482264.4269
ENSG00000121390homo_sapiensENSP0000034396668.833656.979amphilophus_citrinellusENSACIP0000002407970.588258.4314
ENSG00000121390homo_sapiensENSP0000034396674.569863.2887dicentrarchus_labraxENSDLAP0000506830771.691260.8456
ENSG00000121390homo_sapiensENSP0000034396676.290664.8184amphiprion_perculaENSAPEP0000002234576.583565.0672
ENSG00000121390homo_sapiensENSP0000034396673.422662.7151oryzias_sinensisENSOSIP0000003277775.590664.5669
ENSG00000121390homo_sapiensENSP0000034396690.248686.4245pelodiscus_sinensisENSPSIP0000000559189.904886.0952
ENSG00000121390homo_sapiensENSP0000034396690.248686.8069gopherus_evgoodeiENSGEVP0000502061890.248686.8069
ENSG00000121390homo_sapiensENSP0000034396666.156863.2887chelonoidis_abingdoniiENSCABP0000002241787.594983.7975
ENSG00000121390homo_sapiensENSP0000034396676.290665.392seriola_dumeriliENSSDUP0000001458773.888963.3333
ENSG00000121390homo_sapiensENSP0000034396673.231462.5239cottoperca_gobioENSCGOP0000000814365.136155.6122
ENSG00000121390homo_sapiensENSP0000034396612.045910.5163struthio_camelus_australisENSSCUP0000002097885.135174.3243
ENSG00000121390homo_sapiensENSP0000034396615.487615.2964struthio_camelus_australisENSSCUP0000002098297.590496.3855
ENSG00000121390homo_sapiensENSP0000034396691.204687.9541anser_brachyrhynchusENSABRP0000002022190.170186.9565
ENSG00000121390homo_sapiensENSP0000034396670.554557.7438gasterosteus_aculeatusENSGACP0000001966873.069359.802
ENSG00000121390homo_sapiensENSP0000034396623.135817.5908cynoglossus_semilaevisENSCSEP0000001382964.705949.1979
ENSG00000121390homo_sapiensENSP0000034396637.858530.9751cynoglossus_semilaevisENSCSEP0000001381354.545544.6281
ENSG00000121390homo_sapiensENSP0000034396673.996261.9503poecilia_formosaENSPFOP0000000333675.585963.2812
ENSG00000121390homo_sapiensENSP0000034396678.585166.348myripristis_murdjanENSMMDP0000500809079.497167.118
ENSG00000121390homo_sapiensENSP0000034396674.952263.4799sander_luciopercaENSSLUP0000006018473.134361.9403
ENSG00000121390homo_sapiensENSP0000034396691.013487.9541strigops_habroptilaENSSHBP0000501606374.960672.4409
ENSG00000121390homo_sapiensENSP0000034396676.290664.8184amphiprion_ocellarisENSAOCP0000002088176.14564.6947
ENSG00000121390homo_sapiensENSP0000034396675.525872.8489terrapene_carolina_triunguisENSTMTP0000001826388.366985.2349
ENSG00000121390homo_sapiensENSP0000034396678.585167.8776hucho_huchoENSHHUP0000001004674.054163.964
ENSG00000121390homo_sapiensENSP0000034396678.967568.0688hucho_huchoENSHHUP0000008876166.828557.6052
ENSG00000121390homo_sapiensENSP0000034396675.334662.9063betta_splendensENSBSLP0000000726073.507561.3806
ENSG00000121390homo_sapiensENSP0000034396681.453268.8336pygocentrus_nattereriENSPNAP0000001089682.080969.3642
ENSG00000121390homo_sapiensENSP0000034396675.334663.8623anabas_testudineusENSATEP0000000703372.96361.8519
ENSG00000121390homo_sapiensENSP0000034396657.170242.6386ciona_savignyiENSCSAVP0000000592156.628842.2348
ENSG00000121390homo_sapiensENSP0000034396667.495257.3614seriola_lalandi_dorsalisENSSLDP0000000540973.236562.2407
ENSG00000121390homo_sapiensENSP0000034396674.76163.2887labrus_bergyltaENSLBEP0000000581873.358462.1013
ENSG00000121390homo_sapiensENSP0000034396668.451256.0229pundamilia_nyerereiENSPNYP0000001178071.887658.8353
ENSG00000121390homo_sapiensENSP0000034396674.187464.2447mastacembelus_armatusENSMAMP0000000641973.345963.5161
ENSG00000121390homo_sapiensENSP0000034396676.099465.0096stegastes_partitusENSSPAP0000000250375.094364.1509
ENSG00000121390homo_sapiensENSP0000034396678.967569.0249oncorhynchus_tshawytschaENSOTSP0000501036974.147264.8115
ENSG00000121390homo_sapiensENSP0000034396678.585168.4512oncorhynchus_tshawytschaENSOTSP0000503484475.412865.6881
ENSG00000121390homo_sapiensENSP0000034396676.099465.0096acanthochromis_polyacanthusENSAPOP0000002977876.245265.1341
ENSG00000121390homo_sapiensENSP0000034396691.013488.1453aquila_chrysaetos_chrysaetosENSACCP0002001030590.666787.8095
ENSG00000121390homo_sapiensENSP0000034396672.275360.0382nothobranchius_furzeriENSNFUP0001500525173.828161.3281
ENSG00000121390homo_sapiensENSP0000034396671.319359.4646cyprinodon_variegatusENSCVAP0000000616073.280961.1002
ENSG00000121390homo_sapiensENSP0000034396680.305971.5105denticeps_clupeoidesENSDCDP0000003471882.352973.3333
ENSG00000121390homo_sapiensENSP0000034396680.497171.7017denticeps_clupeoidesENSDCDP0000000390082.54973.5294
ENSG00000121390homo_sapiensENSP0000034396673.613861.1855larimichthys_croceaENSLCRP0000501401271.164559.1497
ENSG00000121390homo_sapiensENSP0000034396671.319358.1262takifugu_rubripesENSTRUP0000002860872.427259.0291
ENSG00000121390homo_sapiensENSP0000034396690.822288.1453ficedula_albicollisENSFALP0000000912989.962187.3106
ENSG00000121390homo_sapiensENSP0000034396661.950352.0076hippocampus_comesENSHCOP0000001061372.321460.7143
ENSG00000121390homo_sapiensENSP0000034396678.393966.5392cyprinus_carpio_carpioENSCCRP0000004889681.349269.0476
ENSG00000121390homo_sapiensENSP0000034396682.982879.3499coturnix_japonicaENSCJPP0000500146489.11785.2156
ENSG00000121390homo_sapiensENSP0000034396674.378662.7151poecilia_latipinnaENSPLAP0000000888175.241863.4429
ENSG00000121390homo_sapiensENSP0000034396656.596648.9484sinocyclocheilus_grahamiENSSGRP0000002307881.994570.9141
ENSG00000121390homo_sapiensENSP0000034396668.451256.0229maylandia_zebraENSMZEP0000500774671.887658.8353
ENSG00000121390homo_sapiensENSP0000034396621.414917.5908maylandia_zebraENSMZEP0000503778365.116353.4884
ENSG00000121390homo_sapiensENSP0000034396670.363357.935tetraodon_nigroviridisENSTNIP0000001326472.871360
ENSG00000121390homo_sapiensENSP0000034396680.497170.7457paramormyrops_kingsleyaeENSPKIP0000001781380.497170.7457
ENSG00000121390homo_sapiensENSP0000034396680.497170.5545scleropages_formosusENSSFOP0001500214679.886170.019
ENSG00000121390homo_sapiensENSP0000034396682.982873.9962leptobrachium_leishanenseENSLLEP0000000610571.735563.9669
ENSG00000121390homo_sapiensENSP0000034396671.701759.6558scophthalmus_maximusENSSMAP0000006787264.766853.886
ENSG00000121390homo_sapiensENSP0000034396637.667333.2696oryzias_melastigmaENSOMEP0000000280490.36779.8165

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0001650located_in fibrillar center1IDAHomo_sapiens(9606)Component
GO:0002218involved_in activation of innate immune response1IDAHomo_sapiens(9606)Process
GO:0003723enables RNA binding2HDA,IBAHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005634is_active_in nucleus1IBAHomo_sapiens(9606)Component
GO:0005654located_in nucleoplasm1IDAHomo_sapiens(9606)Component
GO:0005737located_in cytoplasm1IEAHomo_sapiens(9606)Component
GO:0006355involved_in regulation of DNA-templated transcription1IBAHomo_sapiens(9606)Process
GO:0016363located_in nuclear matrix1IEAHomo_sapiens(9606)Component
GO:0016607located_in nuclear speck1IEAHomo_sapiens(9606)Component
GO:0042382located_in paraspeckles1IEAHomo_sapiens(9606)Component
GO:0042752involved_in regulation of circadian rhythm1ISSHomo_sapiens(9606)Process
GO:0045087involved_in innate immune response1IEAHomo_sapiens(9606)Process
GO:0045892involved_in negative regulation of DNA-templated transcription1ISSHomo_sapiens(9606)Process
GO:0048511involved_in rhythmic process1IEAHomo_sapiens(9606)Process

Expression