Functions and Diseases

RBP Type Canonical_RBPs
Diseases CancerFlavivirusesSARS-COV-2Dengue
Drug N.A.
Main interacting RNAs mRNA
Moonlighting functions N.A.
Localizations Stress granucle
BulkPerturb-seq DataSet_01_255 DataSet_01_380

Description

Ensembl ID ENSG00000111605 Gene ID 11052 Accession 13871
Symbol CPSF6 Alias CFIM;CFIM68;CFIM72;HPBRII-4;HPBRII-7 Full Name cleavage and polyadenylation specific factor 6
Status Confidence Length 34790 bases Strand Plus strand
Position 12 : 69239569 - 69274358 RNA binding domain RRM_1
Summary The protein encoded by this gene is one subunit of a cleavage factor required for 3' RNA cleavage and polyadenylation processing. The interaction of the protein with the RNA is one of the earliest steps in the assembly of the 3' end processing complex and facilitates the recruitment of other processing factors. The cleavage factor complex is composed of four polypeptides. This gene encodes the 68kD subunit. It has a domain organization reminiscent of spliceosomal proteins. [provided by RefSeq, Jul 2008]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000391437 RRM_1 PF00076 6.2e-06 1
ENSP00000391774 RRM_1 PF00076 7.8e-06 1
ENSP00000266679 RRM_1 PF00076 8.6e-06 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal
34217312 Ribonucleic acid-binding protein CPSF6 promotes glycolysis and suppresses apoptosis in hepatocellular carcinoma cells by inhibiting the BTG2 expression. Yang Liu 2021-07-03 Biomedical engineering online
32295268 Classic and Variants APLs, as Viewed from a Therapy Response. Marie-Claude Geoffroy 2020-04-14 Cancers
35355934 Deregulated expression and subcellular localization of CPSF6, a circRNA-binding protein, promote malignant development of esophageal squamous cell carcinoma. Shichao Guo 2022-02-28 Chinese journal of cancer research = Chung-kuo yen cheng yen chiu
29606597 The TORC1-Regulated CPA Complex Rewires an RNA Processing Network to Drive Autophagy and Metabolic Reprogramming. Hong-Wen Tang 2018-05-01 Cell metabolism
22400011 mRNA 3' end processing factors: a phylogenetic comparison. K Sarah Darmon 2012-01-01 Comparative and functional genomics
35012348 Intranuclear Positions of HIV-1 Proviruses Are Dynamic and Do Not Correlate with Transcriptional Activity. C Ryan Burdick 2022-02-22 mBio
35798852 Context-specific regulation and function of mRNA alternative polyadenylation. Sibylle Mitschka 2022-12-01 Nature reviews. Molecular cell biology
27107820 HIV-1 capsid is involved in post-nuclear entry steps. Nan-Yu Chen 2016-04-23 Retrovirology
31709264 RARG Gene Dysregulation in Acute Myeloid Leukemia. Rosa Maria Conserva 2019-01-01 Frontiers in molecular biosciences
34113849 A snapshot of HIV-1 capsid-host interactions. Joshua Temple 2020-01-01 Current research in structural biology
28673861 CPSF6 is a Clinically Relevant Breast Cancer Vulnerability Target: Role of CPSF6 in Breast Cancer. Najat Binothman 2017-07-01 EBioMedicine
36073763 U1 snRNP proteins promote proximal alternative polyadenylation sites by directly interacting with 3' end processing core factors. Zhijie Hu 2022-12-26 Journal of molecular cell biology
28053162 POSTAR: a platform for exploring post-transcriptional regulation coordinated by RNA-binding proteins. Boqin Hu 2017-01-04 Nucleic acids research

Transcripts

Name Transcript ID bp Protein Translation ID
CPSF6-202 ENST00000435070 6584 551aa ENSP00000391774
CPSF6-205 ENST00000550075 540 107aa ENSP00000446670
CPSF6-203 ENST00000456847 1915 478aa ENSP00000391437
CPSF6-208 ENST00000650046 7525 165aa ENSP00000497420
CPSF6-201 ENST00000266679 2229 588aa ENSP00000266679
CPSF6-206 ENST00000550987 560 No protein -
CPSF6-207 ENST00000551516 234 56aa ENSP00000450206
CPSF6-204 ENST00000547486 872 No protein -

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
21804Neuroticism8.459e-005-

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000111605homo_sapiensENSP0000039720367.748953.0303homo_sapiensENSP0000039177456.805844.4646

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000111605homo_sapiensENSP00000391774100100nomascus_leucogenysENSNLEP0000004612093.548493.5484
ENSG00000111605homo_sapiensENSP0000039177494.736894.3739pan_paniscusENSPPAP0000000130992.226291.8728
ENSG00000111605homo_sapiensENSP0000039177499.818599.8185pongo_abeliiENSPPYP0000000541893.537493.5374
ENSG00000111605homo_sapiensENSP00000391774100100pan_troglodytesENSPTRP0000000883693.548493.5484
ENSG00000111605homo_sapiensENSP00000391774100100gorilla_gorillaENSGGOP0000002835593.548493.5484
ENSG00000111605homo_sapiensENSP0000039177495.825895.4628ornithorhynchus_anatinusENSOANP0000000946495.479295.1175
ENSG00000111605homo_sapiensENSP0000039177499.63799.274sarcophilus_harrisiiENSSHAP0000000763566.224465.9831
ENSG00000111605homo_sapiensENSP0000039177496.733296.3702notamacropus_eugeniiENSMEUP0000001372890.492490.1528
ENSG00000111605homo_sapiensENSP0000039177465.880265.6987choloepus_hoffmanniENSCHOP0000000989073.185572.9839
ENSG00000111605homo_sapiensENSP0000039177499.818599.637dasypus_novemcinctusENSDNOP0000001185899.637799.4565
ENSG00000111605homo_sapiensENSP0000039177495.825895.6443erinaceus_europaeusENSEEUP0000001372692.957792.7817
ENSG00000111605homo_sapiensENSP0000039177492.377592.3775echinops_telfairiENSETEP0000000169986.712186.7121
ENSG00000111605homo_sapiensENSP00000391774100100callithrix_jacchusENSCJAP0000000326393.707593.7075
ENSG00000111605homo_sapiensENSP00000391774100100cercocebus_atysENSCATP0000003255893.707593.7075
ENSG00000111605homo_sapiensENSP00000391774100100macaca_mulattaENSMMUP0000005376193.707593.7075
ENSG00000111605homo_sapiensENSP00000391774100100macaca_nemestrinaENSMNEP0000002570493.548493.5484
ENSG00000111605homo_sapiensENSP00000391774100100papio_anubisENSPANP0000003310293.707593.7075
ENSG00000111605homo_sapiensENSP0000039177496.370296.3702mandrillus_leucophaeusENSMLEP0000000106193.485993.4859
ENSG00000111605homo_sapiensENSP0000039177495.099895.0998tursiops_truncatusENSTTRP0000001321092.579592.5795
ENSG00000111605homo_sapiensENSP0000039177490.562690.5626vulpes_vulpesENSVVUP0000001386393.09793.097
ENSG00000111605homo_sapiensENSP0000039177430.4930.3085vulpes_vulpesENSVVUP0000001886295.454594.8864
ENSG00000111605homo_sapiensENSP0000039177499.818599.637mus_spretusMGP_SPRETEiJ_P002607493.537493.3673
ENSG00000111605homo_sapiensENSP00000391774100100equus_asinusENSEASP0000501146193.707593.7075
ENSG00000111605homo_sapiensENSP00000391774100100capra_hircusENSCHIP0000000719793.707593.7075
ENSG00000111605homo_sapiensENSP0000039177498.003697.6407loxodonta_africanaENSLAFP0000002879997.649297.2875
ENSG00000111605homo_sapiensENSP0000039177499.818599.8185panthera_leoENSPLOP0000002289293.537493.5374
ENSG00000111605homo_sapiensENSP0000039177410099.8185ailuropoda_melanoleucaENSAMEP0000001241793.707593.5374
ENSG00000111605homo_sapiensENSP0000039177491.83391.1071bos_indicus_hybridENSBIXP0000504561969.889569.337
ENSG00000111605homo_sapiensENSP00000391774100100oryctolagus_cuniculusENSOCUP0000001161475.170575.1705
ENSG00000111605homo_sapiensENSP00000391774100100equus_caballusENSECAP0000004056393.707593.7075
ENSG00000111605homo_sapiensENSP0000039177410099.8185canis_lupus_familiarisENSCAFP0084502775610099.8185
ENSG00000111605homo_sapiensENSP00000391774100100canis_lupus_familiarisENSCAFP0084502372393.707593.7075
ENSG00000111605homo_sapiensENSP0000039177499.818599.8185panthera_pardusENSPPRP0000002911893.537493.5374
ENSG00000111605homo_sapiensENSP00000391774100100marmota_marmota_marmotaENSMMMP0000000449693.707593.7075
ENSG00000111605homo_sapiensENSP0000039177499.818599.8185balaenoptera_musculusENSBMSP0001002317393.537493.5374
ENSG00000111605homo_sapiensENSP0000039177499.818599.8185cavia_porcellusENSCPOP0000003287093.537493.5374
ENSG00000111605homo_sapiensENSP0000039177499.818599.8185felis_catusENSFCAP0000003134393.537493.5374
ENSG00000111605homo_sapiensENSP0000039177490.562690.5626ursus_americanusENSUAMP00000030594100100
ENSG00000111605homo_sapiensENSP0000039177499.63799.274monodelphis_domesticaENSMODP0000004305093.208892.8693
ENSG00000111605homo_sapiensENSP0000039177481.851281.6697bison_bison_bisonENSBBBP0000001977191.295591.0931
ENSG00000111605homo_sapiensENSP0000039177499.818599.8185monodon_monocerosENSMMNP0001502883293.537493.5374
ENSG00000111605homo_sapiensENSP00000391774100100sus_scrofaENSSSCP0000003918193.707593.7075
ENSG00000111605homo_sapiensENSP00000391774100100microcebus_murinusENSMICP0000002687793.707593.7075
ENSG00000111605homo_sapiensENSP0000039177478.221478.2214octodon_degusENSODEP0000000586791.313691.3136
ENSG00000111605homo_sapiensENSP0000039177486.569985.8439octodon_degusENSODEP0000001355196.169495.3629
ENSG00000111605homo_sapiensENSP0000039177464.428361.706octodon_degusENSODEP0000000950088.089384.3672
ENSG00000111605homo_sapiensENSP0000039177498.548198.0036octodon_degusENSODEP0000002513699.087698.5401
ENSG00000111605homo_sapiensENSP0000039177496.370296.3702jaculus_jaculusENSJJAP0000001128693.485993.4859
ENSG00000111605homo_sapiensENSP00000391774100100ovis_aries_rambouilletENSOARP0002000402493.707593.7075
ENSG00000111605homo_sapiensENSP0000039177490.562690.5626ursus_maritimusENSUMAP0000002860193.09793.097
ENSG00000111605homo_sapiensENSP0000039177496.007396.0073ochotona_princepsENSOPRP0000000477593.133893.1338
ENSG00000111605homo_sapiensENSP0000039177499.818599.8185delphinapterus_leucasENSDLEP0000000260399.818599.8185
ENSG00000111605homo_sapiensENSP0000039177499.818599.8185physeter_catodonENSPCTP0000500504293.378693.3786
ENSG00000111605homo_sapiensENSP00000391774100100mus_caroliMGP_CAROLIEiJ_P002482393.707593.7075
ENSG00000111605homo_sapiensENSP0000039177499.818599.637mus_musculusENSMUSP0000013515093.537493.3673
ENSG00000111605homo_sapiensENSP0000039177496.370296.3702dipodomys_ordiiENSDORP0000000277293.485993.4859
ENSG00000111605homo_sapiensENSP0000039177496.007395.2813mustela_putorius_furoENSMPUP0000001739298.144797.4026
ENSG00000111605homo_sapiensENSP0000039177496.551796.5517aotus_nancymaaeENSANAP0000000285592.361192.3611
ENSG00000111605homo_sapiensENSP0000039177496.914796.9147saimiri_boliviensis_boliviensisENSSBOP0000000206192.547792.5477
ENSG00000111605homo_sapiensENSP0000039177496.370296.3702vicugna_pacosENSVPAP0000000788393.485993.4859
ENSG00000111605homo_sapiensENSP00000391774100100chlorocebus_sabaeusENSCSAP0000000058693.707593.7075
ENSG00000111605homo_sapiensENSP0000039177466.424766.4247tupaia_belangeriENSTBEP0000001333073.641973.6419
ENSG00000111605homo_sapiensENSP00000391774100100mesocricetus_auratusENSMAUP0000001312593.707593.7075
ENSG00000111605homo_sapiensENSP0000039177499.818599.8185phocoena_sinusENSPSNP0000000588393.537493.5374
ENSG00000111605homo_sapiensENSP0000039177490.562690.5626camelus_dromedariusENSCDRP0000502249593.09793.097
ENSG00000111605homo_sapiensENSP0000039177496.370296.3702carlito_syrichtaENSTSYP0000000789290.306190.3061
ENSG00000111605homo_sapiensENSP0000039177490.381190.3811panthera_tigris_altaicaENSPTIP0000000160692.910492.9104
ENSG00000111605homo_sapiensENSP0000039177499.818599.8185rattus_norvegicusENSRNOP0000009494893.537493.5374
ENSG00000111605homo_sapiensENSP00000391774100100prolemur_simusENSPSMP0000000524793.707593.7075
ENSG00000111605homo_sapiensENSP00000391774100100microtus_ochrogasterENSMOCP0000001450093.707593.7075
ENSG00000111605homo_sapiensENSP0000039177492.014592.0145sorex_araneusENSSARP0000000612986.371486.3714
ENSG00000111605homo_sapiensENSP0000039177493.466493.2849peromyscus_maniculatus_bairdiiENSPEMP0000000556293.297193.1159
ENSG00000111605homo_sapiensENSP0000039177481.669781.3067bos_mutusENSBMUP0000003418290.361489.9598
ENSG00000111605homo_sapiensENSP0000039177499.818599.637mus_spicilegusENSMSIP0000002640193.537493.3673
ENSG00000111605homo_sapiensENSP00000391774100100cricetulus_griseus_chok1gshdENSCGRP0000101829193.707593.7075
ENSG00000111605homo_sapiensENSP0000039177499.63799.4555pteropus_vampyrusENSPVAP0000001485993.526493.356
ENSG00000111605homo_sapiensENSP0000039177476.95174.4102myotis_lucifugusENSMLUP0000001716192.77989.7155
ENSG00000111605homo_sapiensENSP0000039177471.687870.5989myotis_lucifugusENSMLUP0000002259495.873894.4175
ENSG00000111605homo_sapiensENSP0000039177496.370295.2813myotis_lucifugusENSMLUP0000000379998.698997.5836
ENSG00000111605homo_sapiensENSP0000039177499.63799.274vombatus_ursinusENSVURP0001003155493.367393.0272
ENSG00000111605homo_sapiensENSP00000391774100100rhinolophus_ferrumequinumENSRFEP0001000442893.707593.7075
ENSG00000111605homo_sapiensENSP00000391774100100neovison_visonENSNVIP0000001342793.707593.7075
ENSG00000111605homo_sapiensENSP00000391774100100bos_taurusENSBTAP0000007071093.707593.7075
ENSG00000111605homo_sapiensENSP0000039177499.818599.8185heterocephalus_glaber_femaleENSHGLP0000000098493.537493.5374
ENSG00000111605homo_sapiensENSP0000039177499.818599.8185rhinopithecus_bietiENSRBIP0000003865893.378693.3786
ENSG00000111605homo_sapiensENSP00000391774100100canis_lupus_dingoENSCAFP0002002143593.707593.7075
ENSG00000111605homo_sapiensENSP00000391774100100sciurus_vulgarisENSSVLP0000501979993.707593.7075
ENSG00000111605homo_sapiensENSP0000039177499.63799.274phascolarctos_cinereusENSPCIP0000002536093.367393.0272
ENSG00000111605homo_sapiensENSP00000391774100100procavia_capensisENSPCAP0000001080693.707593.7075
ENSG00000111605homo_sapiensENSP00000391774100100nannospalax_galiliENSNGAP0000001465093.707593.7075
ENSG00000111605homo_sapiensENSP00000391774100100bos_grunniensENSBGRP0000003685679.855179.8551
ENSG00000111605homo_sapiensENSP0000039177496.188896.1888chinchilla_lanigeraENSCLAP0000001470593.309993.3099
ENSG00000111605homo_sapiensENSP0000039177491.651590.9256cervus_hanglu_yarkandensisENSCHYP0000000295181.059480.4173
ENSG00000111605homo_sapiensENSP00000391774100100catagonus_wagneriENSCWAP0000002421193.707593.7075
ENSG00000111605homo_sapiensENSP0000039177498.185197.6407ictidomys_tridecemlineatusENSSTOP0000001266087.540587.055
ENSG00000111605homo_sapiensENSP0000039177494.192494.1924otolemur_garnettiiENSOGAP0000001644699.425399.4253
ENSG00000111605homo_sapiensENSP00000391774100100cebus_imitatorENSCCAP0000002062093.548493.5484
ENSG00000111605homo_sapiensENSP00000391774100100urocitellus_parryiiENSUPAP0001002975993.707593.7075
ENSG00000111605homo_sapiensENSP00000391774100100moschus_moschiferusENSMMSP0000002708093.707593.7075
ENSG00000111605homo_sapiensENSP0000039177499.818599.8185rhinopithecus_roxellanaENSRROP0000003882193.537493.5374
ENSG00000111605homo_sapiensENSP0000039177492.19691.6515mus_pahariMGP_PahariEiJ_P008784089.911589.3805
ENSG00000111605homo_sapiensENSP0000039177499.818599.8185propithecus_coquereliENSPCOP0000002437293.378693.3786
ENSG00000111605homo_sapiensENSP0000039177439.564429.0381caenorhabditis_elegansD1046.1c.444.399232.5866
ENSG00000111605homo_sapiensENSP0000039177460.072647.9129drosophila_melanogasterFBpp007643350.766940.4908
ENSG00000111605homo_sapiensENSP0000039177473.502765.5172petromyzon_marinusENSPMAP0000000072072.321464.4643
ENSG00000111605homo_sapiensENSP0000039177466.969158.0762eptatretus_burgeriENSEBUP0000000517373.50663.745
ENSG00000111605homo_sapiensENSP0000039177495.281390.1996callorhinchus_miliiENSCMIP0000004761191.783286.8881
ENSG00000111605homo_sapiensENSP0000039177496.733294.5554latimeria_chalumnaeENSLACP0000000978196.733294.5554
ENSG00000111605homo_sapiensENSP0000039177484.39280.9437lepisosteus_oculatusENSLOCP0000001995679.759976.5009
ENSG00000111605homo_sapiensENSP0000039177490.562685.118clupea_harengusENSCHAP0000001883285.591880.446
ENSG00000111605homo_sapiensENSP0000039177490.018284.2105danio_rerioENSDARP0000007672688.888983.1541
ENSG00000111605homo_sapiensENSP0000039177478.765971.6878carassius_auratusENSCARP0000002052974.442567.753
ENSG00000111605homo_sapiensENSP0000039177469.328564.0653carassius_auratusENSCARP0000006070285.267978.7946
ENSG00000111605homo_sapiensENSP0000039177488.566282.0327carassius_auratusENSCARP0000010590588.727382.1818
ENSG00000111605homo_sapiensENSP0000039177480.580875.8621astyanax_mexicanusENSAMXP0000001724782.681677.8399
ENSG00000111605homo_sapiensENSP0000039177416.696914.3376ictalurus_punctatusENSIPUP0000000104076.666765.8333
ENSG00000111605homo_sapiensENSP0000039177415.24513.4301ictalurus_punctatusENSIPUP0000000102779.245369.8113
ENSG00000111605homo_sapiensENSP0000039177460.617158.9837ictalurus_punctatusENSIPUP0000003685491.256888.7978
ENSG00000111605homo_sapiensENSP0000039177490.018284.9365esox_luciusENSELUP0000006759377.573.125
ENSG00000111605homo_sapiensENSP0000039177488.384883.4846electrophorus_electricusENSEEEP0000002017986.194781.4159
ENSG00000111605homo_sapiensENSP0000039177488.566283.3031oncorhynchus_kisutchENSOKIP0000509927275.658971.1628
ENSG00000111605homo_sapiensENSP0000039177488.566283.3031oncorhynchus_kisutchENSOKIP0000506479575.541871.0526
ENSG00000111605homo_sapiensENSP0000039177488.566283.3031oncorhynchus_mykissENSOMYP0000013788471.240967.0073
ENSG00000111605homo_sapiensENSP0000039177488.747783.4846oncorhynchus_mykissENSOMYP0000013671071.386967.1533
ENSG00000111605homo_sapiensENSP0000039177480.762375.8621salmo_salarENSSSAP0000012255188.118882.7723
ENSG00000111605homo_sapiensENSP0000039177477.31472.9583salmo_salarENSSSAP0000014765084.523879.7619
ENSG00000111605homo_sapiensENSP0000039177488.747783.4846salmo_truttaENSSTUP0000007485276.28771.7629
ENSG00000111605homo_sapiensENSP0000039177488.747783.4846salmo_truttaENSSTUP0000006839176.28771.7629
ENSG00000111605homo_sapiensENSP0000039177480.580875.6806gadus_morhuaENSGMOP0000001385089.156683.7349
ENSG00000111605homo_sapiensENSP0000039177489.110784.5735fundulus_heteroclitusENSFHEP0000001788679.967475.8958
ENSG00000111605homo_sapiensENSP0000039177489.655284.9365poecilia_reticulataENSPREP0000000637684.300379.8635
ENSG00000111605homo_sapiensENSP0000039177489.473784.755xiphophorus_maculatusENSXMAP0000000347284.129779.6928
ENSG00000111605homo_sapiensENSP0000039177491.288686.5699oryzias_latipesENSORLP0000001741891.288686.5699
ENSG00000111605homo_sapiensENSP0000039177491.651586.9328cyclopterus_lumpusENSCLMP0000502573186.324881.8803
ENSG00000111605homo_sapiensENSP0000039177491.470186.7514oreochromis_niloticusENSONIP0000001473586.153881.7094
ENSG00000111605homo_sapiensENSP0000039177491.83386.9328haplochromis_burtoniENSHBUP0000000467786.348181.7406
ENSG00000111605homo_sapiensENSP0000039177491.83386.7514astatotilapia_callipteraENSACLP0000003899886.348181.57
ENSG00000111605homo_sapiensENSP0000039177491.651586.7514sparus_aurataENSSAUP0001002977786.324881.7094
ENSG00000111605homo_sapiensENSP0000039177493.647988.9292xenopus_tropicalisENSXETP0000000303392.805888.1295
ENSG00000111605homo_sapiensENSP0000039177498.729698.0036chrysemys_picta_belliiENSCPBP0000001823793.470892.7835
ENSG00000111605homo_sapiensENSP0000039177498.911198.1851sphenodon_punctatusENSSPUP0000000163693.642692.9553
ENSG00000111605homo_sapiensENSP0000039177498.548196.7332laticauda_laticaudataENSLLTP0000002400890.049888.3914
ENSG00000111605homo_sapiensENSP0000039177485.11884.392meleagris_gallopavoENSMGAP0000001096198.945198.1013
ENSG00000111605homo_sapiensENSP0000039177425.045423.2305anolis_carolinensisENSACAP000000260309285.3333
ENSG00000111605homo_sapiensENSP0000039177491.83387.1143neolamprologus_brichardiENSNBRP000000051459287.2727
ENSG00000111605homo_sapiensENSP0000039177494.192492.559podarcis_muralisENSPMRP0000002778598.48296.7742
ENSG00000111605homo_sapiensENSP0000039177495.281391.2886erpetoichthys_calabaricusENSECRP0000000240593.250489.3428
ENSG00000111605homo_sapiensENSP0000039177491.107186.2069kryptolebias_marmoratusENSKMAP0000001989386.254381.6151
ENSG00000111605homo_sapiensENSP0000039177478.221473.6842oryzias_javanicusENSOJAP0000004620885.515980.5556
ENSG00000111605homo_sapiensENSP0000039177491.651586.9328amphilophus_citrinellusENSACIP0000002371288.132683.5951
ENSG00000111605homo_sapiensENSP0000039177489.836784.9365dicentrarchus_labraxENSDLAP0000506772078.571474.2857
ENSG00000111605homo_sapiensENSP0000039177491.288686.5699oryzias_sinensisENSOSIP0000000115891.288686.5699
ENSG00000111605homo_sapiensENSP0000039177491.288686.5699oryzias_sinensisENSOSIP0000001912391.288686.5699
ENSG00000111605homo_sapiensENSP0000039177478.765978.0399pelodiscus_sinensisENSPSIP0000001840491.754890.9091
ENSG00000111605homo_sapiensENSP0000039177498.729698.0036gopherus_evgoodeiENSGEVP0000500238493.470892.7835
ENSG00000111605homo_sapiensENSP0000039177498.911198.1851chelonoidis_abingdoniiENSCABP0000002120498.731998.0072
ENSG00000111605homo_sapiensENSP0000039177491.83387.2958seriola_dumeriliENSSDUP0000000683186.495782.2222
ENSG00000111605homo_sapiensENSP0000039177476.406571.5064cottoperca_gobioENSCGOP0000005123094.606788.5393
ENSG00000111605homo_sapiensENSP0000039177490.925685.4809gasterosteus_aculeatusENSGACP0000002602091.423485.9489
ENSG00000111605homo_sapiensENSP0000039177491.288686.7514cynoglossus_semilaevisENSCSEP0000001394085.836281.57
ENSG00000111605homo_sapiensENSP0000039177452.631647.0054poecilia_formosaENSPFOP0000000696461.965855.3419
ENSG00000111605homo_sapiensENSP0000039177492.014587.1143myripristis_murdjanENSMMDP0000505349386.518881.9113
ENSG00000111605homo_sapiensENSP0000039177491.288686.3884sander_luciopercaENSSLUP0000003953786.426181.7869
ENSG00000111605homo_sapiensENSP0000039177491.288687.1143amphiprion_ocellarisENSAOCP0000002831791.621187.4317
ENSG00000111605homo_sapiensENSP0000039177498.729698.0036terrapene_carolina_triunguisENSTMTP0000002322993.470892.7835
ENSG00000111605homo_sapiensENSP0000039177488.747783.4846hucho_huchoENSHHUP0000003741876.28771.7629
ENSG00000111605homo_sapiensENSP0000039177491.651586.7514betta_splendensENSBSLP0000004937586.177581.57
ENSG00000111605homo_sapiensENSP0000039177490.199685.118pygocentrus_nattereriENSPNAP0000003466090.693485.5839
ENSG00000111605homo_sapiensENSP0000039177453.90242.4682ciona_savignyiENSCSAVP0000000029459.51946.8938
ENSG00000111605homo_sapiensENSP0000039177491.83387.2958seriola_lalandi_dorsalisENSSLDP0000001138786.495782.2222
ENSG00000111605homo_sapiensENSP0000039177414.519113.6116labrus_bergyltaENSLBEP0000003873986.021580.6452
ENSG00000111605homo_sapiensENSP0000039177491.107186.2069labrus_bergyltaENSLBEP0000002047184.797380.2365
ENSG00000111605homo_sapiensENSP0000039177491.83386.9328pundamilia_nyerereiENSPNYP0000002692886.348181.7406
ENSG00000111605homo_sapiensENSP0000039177491.288686.5699mastacembelus_armatusENSMAMP0000001528985.982981.5385
ENSG00000111605homo_sapiensENSP0000039177491.470187.1143stegastes_partitusENSSPAP0000001841086.153882.0513
ENSG00000111605homo_sapiensENSP0000039177471.143466.4247oncorhynchus_tshawytschaENSOTSP0000508370673.27168.4112
ENSG00000111605homo_sapiensENSP0000039177490.562684.755nothobranchius_furzeriENSNFUP0001501710285.153679.6928
ENSG00000111605homo_sapiensENSP0000039177488.929283.1216cyprinodon_variegatusENSCVAP0000002803083.617778.157
ENSG00000111605homo_sapiensENSP0000039177491.470186.2069denticeps_clupeoidesENSDCDP0000005736792.647187.3162
ENSG00000111605homo_sapiensENSP0000039177475.499170.9619larimichthys_croceaENSLCRP0000505845082.868577.8884
ENSG00000111605homo_sapiensENSP0000039177490.744184.9365takifugu_rubripesENSTRUP0000004207389.285783.5714
ENSG00000111605homo_sapiensENSP0000039177490.018285.118hippocampus_comesENSHCOP0000002486586.111181.4236
ENSG00000111605homo_sapiensENSP0000039177489.655283.1216cyprinus_carpio_carpioENSCCRP0000015208884.156778.0238
ENSG00000111605homo_sapiensENSP0000039177489.655284.9365poecilia_latipinnaENSPLAP0000000407284.300379.8635
ENSG00000111605homo_sapiensENSP0000039177449.546342.4682sinocyclocheilus_grahamiENSSGRP0000011155274.590263.9344
ENSG00000111605homo_sapiensENSP0000039177490.018283.1216sinocyclocheilus_grahamiENSSGRP0000010291391.009284.0367
ENSG00000111605homo_sapiensENSP0000039177491.83386.9328maylandia_zebraENSMZEP0000501058786.348181.7406
ENSG00000111605homo_sapiensENSP0000039177489.836784.755tetraodon_nigroviridisENSTNIP0000001038790.328585.219
ENSG00000111605homo_sapiensENSP0000039177491.651586.9328paramormyrops_kingsleyaeENSPKIP0000001697391.985487.2495
ENSG00000111605homo_sapiensENSP0000039177492.377587.8403paramormyrops_kingsleyaeENSPKIP0000000627192.883288.3212
ENSG00000111605homo_sapiensENSP0000039177490.199686.2069scleropages_formosusENSSFOP0001502456891.192787.156
ENSG00000111605homo_sapiensENSP0000039177491.288686.5699scleropages_formosusENSSFOP0001503826575.981972.0544
ENSG00000111605homo_sapiensENSP0000039177492.014586.3884leptobrachium_leishanenseENSLLEP0000004470491.516285.9206
ENSG00000111605homo_sapiensENSP0000039177489.110783.6661scophthalmus_maximusENSSMAP0000003952082.382677.349
ENSG00000111605homo_sapiensENSP0000039177490.925686.0254oryzias_melastigmaENSOMEP0000000827690.760985.8696

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0003723enables RNA binding2HDA,IDAHomo_sapiens(9606)Function
GO:0003729enables mRNA binding2IBA,IDAHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005634located_in nucleus1IDAHomo_sapiens(9606)Component
GO:0005654located_in nucleoplasm2IDA,TASHomo_sapiens(9606)Component
GO:0005726located_in perichromatin fibrils1IDAHomo_sapiens(9606)Component
GO:0005737located_in cytoplasm1IDAHomo_sapiens(9606)Component
GO:0005847part_of mRNA cleavage and polyadenylation specificity factor complex2IBA,IDAHomo_sapiens(9606)Component
GO:0005849part_of mRNA cleavage factor complex2IDA,IPIHomo_sapiens(9606)Component
GO:0006397involved_in mRNA processing1IDAHomo_sapiens(9606)Process
GO:0016020located_in membrane1HDAHomo_sapiens(9606)Component
GO:0016607located_in nuclear speck1IDAHomo_sapiens(9606)Component
GO:0031124involved_in mRNA 3-end processing1IDAHomo_sapiens(9606)Process
GO:0035061located_in interchromatin granule1IDAHomo_sapiens(9606)Component
GO:0042382located_in paraspeckles1IDAHomo_sapiens(9606)Component
GO:0043023enables ribosomal large subunit binding1IDAHomo_sapiens(9606)Function
GO:0046833involved_in positive regulation of RNA export from nucleus1IMPHomo_sapiens(9606)Process
GO:0051179involved_in localization1IDAHomo_sapiens(9606)Process
GO:0051262involved_in protein tetramerization1IDAHomo_sapiens(9606)Process
GO:0051290involved_in protein heterotetramerization1IDAHomo_sapiens(9606)Process
GO:0110104involved_in mRNA alternative polyadenylation2IBA,IMPHomo_sapiens(9606)Process
GO:1990120involved_in messenger ribonucleoprotein complex assembly1IDAHomo_sapiens(9606)Process
GO:1990448enables exon-exon junction complex binding1IDAHomo_sapiens(9606)Function
GO:1990904part_of ribonucleoprotein complex1IDAHomo_sapiens(9606)Component

Expression