Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases Disease
Drug Drug
Main interacting RNAs N.A.
Moonlighting functions Metabolic enzyme
Localizations Stress granucle
BulkPerturb-seq

Description

Ensembl ID ENSG00000228716 Gene ID 1719 Accession 2861
Symbol DHFR Alias DYR;DHFR1;DHFRP1 Full Name dihydrofolate reductase
Status Confidence Length 28758 bases Strand Minus strand
Position 5 : 80626226 - 80654983 RNA binding domain N.A.
Summary Dihydrofolate reductase converts dihydrofolate into tetrahydrofolate, a methyl group shuttle required for the de novo synthesis of purines, thymidylic acid, and certain amino acids. While the functional dihydrofolate reductase gene has been mapped to chromosome 5, multiple intronless processed pseudogenes or dihydrofolate reductase-like genes have been identified on separate chromosomes. Dihydrofolate reductase deficiency has been linked to megaloblastic anemia. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Mar 2014]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
DHFR-201 ENST00000439211 3919 187aa ENSP00000396308
DHFR-203 ENST00000505337 1719 187aa ENSP00000426474
DHFR-205 ENST00000511032 1474 129aa ENSP00000422732
DHFR-202 ENST00000504396 1447 135aa ENSP00000421334
DHFR-206 ENST00000513048 994 No protein -
DHFR-204 ENST00000508282 545 No protein -
DHFR-207 ENST00000513314 582 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000900enables mRNA regulatory element binding translation repressor activity1IDAHomo_sapiens(9606)Function
GO:0003729enables mRNA binding1IDAHomo_sapiens(9606)Function
GO:0004146enables dihydrofolate reductase activity4IBA,IDA,ISS,NASHomo_sapiens(9606)Function
GO:0005542enables folic acid binding1IDAHomo_sapiens(9606)Function
GO:0005739is_active_in mitochondrion2IBA,IDAHomo_sapiens(9606)Component
GO:0005829located_in cytosol1TASHomo_sapiens(9606)Component
GO:0006545involved_in glycine biosynthetic process1IEAHomo_sapiens(9606)Process
GO:0006729involved_in tetrahydrobiopterin biosynthetic process2IMP,ISSHomo_sapiens(9606)Process
GO:0006730involved_in one-carbon metabolic process1IEAHomo_sapiens(9606)Process
GO:0017148involved_in negative regulation of translation1IDAHomo_sapiens(9606)Process
GO:0031103involved_in axon regeneration1ISSHomo_sapiens(9606)Process
GO:0031427involved_in response to methotrexate1IEAHomo_sapiens(9606)Process
GO:0046452involved_in dihydrofolate metabolic process2IBA,IDAHomo_sapiens(9606)Process
GO:0046653involved_in tetrahydrofolate metabolic process1IDAHomo_sapiens(9606)Process
GO:0046654involved_in tetrahydrofolate biosynthetic process3IBA,IDA,IEAHomo_sapiens(9606)Process
GO:0046655involved_in folic acid metabolic process2IBA,ISSHomo_sapiens(9606)Process
GO:0050661enables NADP binding1IBAHomo_sapiens(9606)Function
GO:0051000involved_in positive regulation of nitric-oxide synthase activity1ISSHomo_sapiens(9606)Process
GO:0070402enables NADPH binding1IDAHomo_sapiens(9606)Function
GO:1990825enables sequence-specific mRNA binding1IDAHomo_sapiens(9606)Function
GO:2000121involved_in regulation of removal of superoxide radicals1ISSHomo_sapiens(9606)Process

Expression