Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases Disease
Drug Drug
Main interacting RNAs N.A.
Moonlighting functions N.A.
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000213923 Gene ID 1454 Accession 2453
Symbol CSNK1E Alias CKIe;HCKIE;CKIepsilon Full Name casein kinase 1 epsilon
Status Confidence Length 27394 bases Strand Minus strand
Position 22 : 38290691 - 38318084 RNA binding domain N.A.
Summary The protein encoded by this gene is a serine/threonine protein kinase and a member of the casein kinase I protein family, whose members have been implicated in the control of cytoplasmic and nuclear processes, including DNA replication and repair. The encoded protein is found in the cytoplasm as a monomer and can phosphorylate a variety of proteins, including itself. This protein has been shown to phosphorylate period, a circadian rhythm protein. Two transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Feb 2014]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal
18518968 Inhibition of casein kinase 1-epsilon induces cancer-cell-selective, PERIOD2-dependent growth arrest. Seok Wan Yang 2008-01-01 Genome biology

Transcripts

Name Transcript ID bp Protein Translation ID
CSNK1E-203 ENST00000396832 2817 416aa ENSP00000380044
CSNK1E-201 ENST00000359867 2642 416aa ENSP00000352929
CSNK1E-202 ENST00000366216 1005 119aa ENSP00000400494
CSNK1E-209 ENST00000431632 763 144aa ENSP00000403610
CSNK1E-213 ENST00000495232 669 No protein -
CSNK1E-204 ENST00000403904 1580 416aa ENSP00000384074
CSNK1E-208 ENST00000431611 814 256aa ENSP00000412194
CSNK1E-212 ENST00000494610 539 No protein -
CSNK1E-206 ENST00000413574 1631 336aa ENSP00000407235
CSNK1E-205 ENST00000405675 2127 311aa ENSP00000384426
CSNK1E-215 ENST00000612795 3162 385aa ENSP00000501204
CSNK1E-214 ENST00000498529 381 No protein -
CSNK1E-210 ENST00000442216 787 168aa ENSP00000397460
CSNK1E-211 ENST00000451964 873 270aa ENSP00000403057
CSNK1E-207 ENST00000430335 996 225aa ENSP00000412335

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0003723enables RNA binding1HDAHomo_sapiens(9606)Function
GO:0004672enables protein kinase activity2IDA,ISSHomo_sapiens(9606)Function
GO:0004674enables protein serine/threonine kinase activity3IBA,IDA,TASHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005524enables ATP binding1IEAHomo_sapiens(9606)Function
GO:0005634is_active_in nucleus2IBA,ISSHomo_sapiens(9606)Component
GO:0005654located_in nucleoplasm1TASHomo_sapiens(9606)Component
GO:0005737is_active_in cytoplasm2IBA,IDAHomo_sapiens(9606)Component
GO:0005829located_in cytosol1TASHomo_sapiens(9606)Component
GO:0006281involved_in DNA repair1TASHomo_sapiens(9606)Process
GO:0006468involved_in protein phosphorylation2IDA,ISSHomo_sapiens(9606)Process
GO:0006897involved_in endocytosis1IBAHomo_sapiens(9606)Process
GO:0007165involved_in signal transduction1IBAHomo_sapiens(9606)Process
GO:0008104involved_in protein localization1IEAHomo_sapiens(9606)Process
GO:0018105involved_in peptidyl-serine phosphorylation2IBA,IDAHomo_sapiens(9606)Process
GO:0030178involved_in negative regulation of Wnt signaling pathway1IEAHomo_sapiens(9606)Process
GO:0030426located_in growth cone1IEAHomo_sapiens(9606)Component
GO:0032091involved_in negative regulation of protein binding1IDAHomo_sapiens(9606)Process
GO:0032436involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process2IBA,ISSHomo_sapiens(9606)Process
GO:0032880involved_in regulation of protein localization1IDAHomo_sapiens(9606)Process
GO:0032922involved_in circadian regulation of gene expression1ISSHomo_sapiens(9606)Process
GO:0042752involved_in regulation of circadian rhythm1ISSHomo_sapiens(9606)Process
GO:0043025located_in neuronal cell body1IEAHomo_sapiens(9606)Component
GO:0048512involved_in circadian behavior1IEAHomo_sapiens(9606)Process
GO:0060070involved_in canonical Wnt signaling pathway3IDA,IGI,IMPHomo_sapiens(9606)Process
GO:0090263involved_in positive regulation of canonical Wnt signaling pathway1IBAHomo_sapiens(9606)Process
GO:0106310enables protein serine kinase activity1IEAHomo_sapiens(9606)Function
GO:1902004involved_in positive regulation of amyloid-beta formation1IEAHomo_sapiens(9606)Process
GO:1905426involved_in positive regulation of Wnt-mediated midbrain dopaminergic neuron differentiation1NASHomo_sapiens(9606)Process
GO:1990090involved_in cellular response to nerve growth factor stimulus1IEAHomo_sapiens(9606)Process
GO:1990904part_of ribonucleoprotein complex1IEAHomo_sapiens(9606)Component
GO:2000052involved_in positive regulation of non-canonical Wnt signaling pathway1ICHomo_sapiens(9606)Process

Expression