Functions and Diseases

RBP Type Canonical_RBPs
Diseases CancerFlavivirusesSARS-COV-2SINVDengueZika
Drug N.A.
Main interacting RNAs mRNA
Moonlighting functions N.A.
Localizations Stress granucleNucleoli
BulkPerturb-seq N.A.

Description

Ensembl ID ENSG00000196141 Gene ID 26010 Accession 24574
Symbol SPATS2L Alias SGNP;DNAPTP6 Full Name spermatogenesis associated serine rich 2 like
Status Confidence Length 176384 bases Strand Plus strand
Position 2 : 200305881 - 200482264 RNA binding domain DUF1387
Summary Enables RNA binding activity. Located in cytosol; nucleolus; and nucleoplasm. Part of protein-containing complex. [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000351503 DUF1387 PF07139 2.6e-135 1
ENSP00000386336 DUF1387 PF07139 2.6e-135 1
ENSP00000386730 DUF1387 PF07139 2.6e-135 1
ENSP00000386931 DUF1387 PF07139 2.6e-135 1
ENSP00000391467 DUF1387 PF07139 2.6e-135 1
ENSP00000386310 DUF1387 PF07139 2.7e-135 1
ENSP00000482515 DUF1387 PF07139 3e-135 1
ENSP00000386391 DUF1387 PF07139 4.3e-133 1
ENSP00000353989 DUF1387 PF07139 4.7e-111 1
ENSP00000353989 DUF1387 PF07139 4.7e-111 2
ENSP00000386600 DUF1387 PF07139 2.2e-91 1
ENSP00000386600 DUF1387 PF07139 2.2e-91 2
ENSP00000413648 DUF1387 PF07139 1.4e-73 1
ENSP00000413648 DUF1387 PF07139 1.4e-73 2
ENSP00000390506 DUF1387 PF07139 5e-43 1
ENSP00000390506 DUF1387 PF07139 5e-43 2
ENSP00000405751 DUF1387 PF07139 3.7e-39 1
ENSP00000413142 DUF1387 PF07139 1.1e-29 1
ENSP00000413142 DUF1387 PF07139 1.1e-29 2
ENSP00000389908 DUF1387 PF07139 1.3e-21 1
ENSP00000402559 DUF1387 PF07139 1.4e-17 1
ENSP00000396109 DUF1387 PF07139 2.5e-16 1
ENSP00000411294 DUF1387 PF07139 1e-10 1
ENSP00000406728 DUF1387 PF07139 5.8e-06 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
SPATS2L-214 ENST00000439084 584 94aa ENSP00000406728
SPATS2L-208 ENST00000409718 2648 558aa ENSP00000386336
SPATS2L-201 ENST00000358677 6156 558aa ENSP00000351503
SPATS2L-209 ENST00000409988 2698 558aa ENSP00000386931
SPATS2L-206 ENST00000409385 2320 498aa ENSP00000386391
SPATS2L-215 ENST00000439395 561 115aa ENSP00000411294
SPATS2L-216 ENST00000444012 605 23aa ENSP00000405506
SPATS2L-218 ENST00000451764 2250 558aa ENSP00000391467
SPATS2L-202 ENST00000360760 2119 489aa ENSP00000353989
SPATS2L-211 ENST00000423749 771 139aa ENSP00000396109
SPATS2L-212 ENST00000428692 541 13aa ENSP00000398198
SPATS2L-226 ENST00000471601 1730 No protein -
SPATS2L-220 ENST00000457757 835 188aa ENSP00000389908
SPATS2L-219 ENST00000453663 637 193aa ENSP00000390506
SPATS2L-204 ENST00000409140 6212 558aa ENSP00000386730
SPATS2L-221 ENST00000459656 1901 No protein -
SPATS2L-225 ENST00000471533 329 No protein -
SPATS2L-207 ENST00000409397 920 265aa ENSP00000386600
SPATS2L-205 ENST00000409151 1979 566aa ENSP00000386310
SPATS2L-210 ENST00000421573 600 154aa ENSP00000402559
SPATS2L-217 ENST00000449647 678 173aa ENSP00000413142
SPATS2L-213 ENST00000438761 887 238aa ENSP00000413648
SPATS2L-203 ENST00000366118 695 117aa ENSP00000405751
SPATS2L-224 ENST00000468832 547 No protein -
SPATS2L-223 ENST00000462190 745 No protein -
SPATS2L-222 ENST00000460095 775 No protein -
SPATS2L-227 ENST00000619961 6115 588aa ENSP00000482515

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
9645Echocardiography8.63701550855023E-517903301
28667Creatinine4.0860000E-006-
39480Platelet Function Tests6.3700000E-006-
71666Pelvic Organ Prolapse3E-626545240
76370Urine9E-626631737
77356Thinness2E-625811787
77357Uric Acid2E-625811787
82943Schizophrenia5E-626198764
91391Mental Processes3E-827046643

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000196141homo_sapiensENSP0000044794754.495438.3486homo_sapiensENSP0000038673053.225837.4552

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000196141homo_sapiensENSP0000038673099.103998.9247nomascus_leucogenysENSNLEP0000000842094.207894.0375
ENSG00000196141homo_sapiensENSP0000038673099.820899.8208pan_paniscusENSPPAP0000002611598.584198.5841
ENSG00000196141homo_sapiensENSP0000038673099.462498.5663pongo_abeliiENSPPYP0000003500294.387893.5374
ENSG00000196141homo_sapiensENSP00000386730100100pan_troglodytesENSPTRP0000007441194.89894.898
ENSG00000196141homo_sapiensENSP0000038673099.820899.8208gorilla_gorillaENSGGOP0000003221894.727994.7279
ENSG00000196141homo_sapiensENSP0000038673053.40544.2652ornithorhynchus_anatinusENSOANP0000004687259.839449.5984
ENSG00000196141homo_sapiensENSP0000038673085.304777.2401sarcophilus_harrisiiENSSHAP0000001899473.006166.1043
ENSG00000196141homo_sapiensENSP0000038673053.763448.2079notamacropus_eugeniiENSMEUP0000000029759.405953.2673
ENSG00000196141homo_sapiensENSP0000038673086.021582.9749choloepus_hoffmanniENSCHOP0000000941188.560985.4244
ENSG00000196141homo_sapiensENSP0000038673094.444490.8602dasypus_novemcinctusENSDNOP0000001846694.444490.8602
ENSG00000196141homo_sapiensENSP0000038673075.089672.2222erinaceus_europaeusENSEEUP0000000122876.880773.945
ENSG00000196141homo_sapiensENSP0000038673079.032374.7312echinops_telfairiENSETEP0000001346381.365376.9373
ENSG00000196141homo_sapiensENSP0000038673097.311896.7742callithrix_jacchusENSCJAP0000000763486.327585.8506
ENSG00000196141homo_sapiensENSP0000038673096.59594.9821cercocebus_atysENSCATP0000000206092.452890.9091
ENSG00000196141homo_sapiensENSP0000038673099.283298.3871macaca_fascicularisENSMFAP0000003398092.642191.806
ENSG00000196141homo_sapiensENSP0000038673099.462498.7455macaca_mulattaENSMMUP0000004235792.809492.1405
ENSG00000196141homo_sapiensENSP0000038673099.103998.3871macaca_nemestrinaENSMNEP0000000361292.474991.806
ENSG00000196141homo_sapiensENSP0000038673099.462498.7455papio_anubisENSPANP0000000482192.964892.2948
ENSG00000196141homo_sapiensENSP0000038673099.462498.9247mandrillus_leucophaeusENSMLEP0000002590698.056597.5265
ENSG00000196141homo_sapiensENSP0000038673093.548491.0394tursiops_truncatusENSTTRP0000000955395.604493.0403
ENSG00000196141homo_sapiensENSP0000038673095.698993.3692vulpes_vulpesENSVVUP0000003598387.54185.4098
ENSG00000196141homo_sapiensENSP0000038673092.831589.6057mus_spretusMGP_SPRETEiJ_P001873189.619486.5052
ENSG00000196141homo_sapiensENSP0000038673094.802991.7563equus_asinusENSEASP0000502951089.813286.927
ENSG00000196141homo_sapiensENSP0000038673096.415893.7276capra_hircusENSCHIP0000003255195.05392.4028
ENSG00000196141homo_sapiensENSP0000038673093.906890.8602loxodonta_africanaENSLAFP0000001918492.743489.7345
ENSG00000196141homo_sapiensENSP0000038673095.698993.5484panthera_leoENSPLOP0000002348290.816388.7755
ENSG00000196141homo_sapiensENSP0000038673095.878193.0107ailuropoda_melanoleucaENSAMEP0000002669890.67887.9661
ENSG00000196141homo_sapiensENSP0000038673096.057493.5484bos_indicus_hybridENSBIXP0000500230194.699692.2262
ENSG00000196141homo_sapiensENSP0000038673095.340592.8315oryctolagus_cuniculusENSOCUP0000002548780.120578.012
ENSG00000196141homo_sapiensENSP0000038673094.08691.2186equus_caballusENSECAP0000004927685.365982.7642
ENSG00000196141homo_sapiensENSP0000038673096.236693.9068canis_lupus_familiarisENSCAFP0084503919878.854676.9457
ENSG00000196141homo_sapiensENSP0000038673095.698993.5484panthera_pardusENSPPRP0000001201990.816388.7755
ENSG00000196141homo_sapiensENSP0000038673095.698993.0107marmota_marmota_marmotaENSMMMP0000001324395.870793.1777
ENSG00000196141homo_sapiensENSP0000038673096.057493.9068balaenoptera_musculusENSBMSP0001000453494.699692.5795
ENSG00000196141homo_sapiensENSP0000038673090.501885.8423cavia_porcellusENSCPOP0000000288989.380584.7788
ENSG00000196141homo_sapiensENSP0000038673095.878193.5484felis_catusENSFCAP0000003959290.986488.7755
ENSG00000196141homo_sapiensENSP0000038673095.340592.6523ursus_americanusENSUAMP0000001799195.340592.6523
ENSG00000196141homo_sapiensENSP0000038673085.842377.0609monodelphis_domesticaENSMODP0000001554386.306377.4775
ENSG00000196141homo_sapiensENSP0000038673093.906891.3979bison_bison_bisonENSBBBP0000000423789.267586.8825
ENSG00000196141homo_sapiensENSP0000038673096.057493.7276monodon_monocerosENSMMNP0001501220894.699692.4028
ENSG00000196141homo_sapiensENSP0000038673096.057493.0107sus_scrofaENSSSCP0000006589686.87284.1167
ENSG00000196141homo_sapiensENSP0000038673097.311895.5197microcebus_murinusENSMICP0000003276992.504390.8007
ENSG00000196141homo_sapiensENSP0000038673090.68184.5878octodon_degusENSODEP0000001331788.927982.9525
ENSG00000196141homo_sapiensENSP0000038673092.652390.3226jaculus_jaculusENSJJAP0000001784491.829589.5204
ENSG00000196141homo_sapiensENSP0000038673096.59594.086ovis_aries_rambouilletENSOARP0002001854095.229792.7562
ENSG00000196141homo_sapiensENSP0000038673095.340592.6523ursus_maritimusENSUMAP0000002901995.340592.6523
ENSG00000196141homo_sapiensENSP0000038673091.397988.8889ochotona_princepsENSOPRP0000000140093.406690.8425
ENSG00000196141homo_sapiensENSP0000038673096.057493.7276delphinapterus_leucasENSDLEP0000002384496.057493.7276
ENSG00000196141homo_sapiensENSP0000038673096.057493.7276physeter_catodonENSPCTP0000500184194.699692.4028
ENSG00000196141homo_sapiensENSP0000038673092.473189.4265mus_caroliMGP_CAROLIEiJ_P001772584.176281.4029
ENSG00000196141homo_sapiensENSP0000038673092.652389.4265mus_musculusENSMUSP0000013305489.446486.3322
ENSG00000196141homo_sapiensENSP0000038673093.548490.1434dipodomys_ordiiENSDORP0000000732793.548490.1434
ENSG00000196141homo_sapiensENSP0000038673095.161392.1147mustela_putorius_furoENSMPUP0000000797294.991191.9499
ENSG00000196141homo_sapiensENSP0000038673097.670296.9534aotus_nancymaaeENSANAP0000002326092.687192.0068
ENSG00000196141homo_sapiensENSP0000038673097.849597.491saimiri_boliviensis_boliviensisENSSBOP0000003125592.857192.517
ENSG00000196141homo_sapiensENSP0000038673077.95775.8064vicugna_pacosENSVPAP0000000945979.670377.4725
ENSG00000196141homo_sapiensENSP0000038673099.283298.5663chlorocebus_sabaeusENSCSAP0000000753495.025794.3396
ENSG00000196141homo_sapiensENSP0000038673092.652389.7849tupaia_belangeriENSTBEP0000000196994.688691.7582
ENSG00000196141homo_sapiensENSP0000038673092.473188.7097mesocricetus_auratusENSMAUP0000001833292.307788.551
ENSG00000196141homo_sapiensENSP0000038673096.057493.7276phocoena_sinusENSPSNP0000002629292.733690.4844
ENSG00000196141homo_sapiensENSP0000038673094.802992.1147camelus_dromedariusENSCDRP0000501443293.298190.6526
ENSG00000196141homo_sapiensENSP0000038673094.444492.1147carlito_syrichtaENSTSYP0000002071989.473787.2666
ENSG00000196141homo_sapiensENSP0000038673095.698993.5484panthera_tigris_altaicaENSPTIP0000000870090.816388.7755
ENSG00000196141homo_sapiensENSP0000038673093.1990.3226rattus_norvegicusENSRNOP0000002152790.121387.3484
ENSG00000196141homo_sapiensENSP0000038673096.774295.1613prolemur_simusENSPSMP0000003679091.836790.3061
ENSG00000196141homo_sapiensENSP0000038673092.293988.5305microtus_ochrogasterENSMOCP0000000651091.150487.4336
ENSG00000196141homo_sapiensENSP0000038673086.917684.0502sorex_araneusENSSARP0000000987889.648886.6913
ENSG00000196141homo_sapiensENSP0000038673093.369290.3226peromyscus_maniculatus_bairdiiENSPEMP0000003337591.725388.7324
ENSG00000196141homo_sapiensENSP0000038673096.236693.7276bos_mutusENSBMUP0000000139588.032885.7377
ENSG00000196141homo_sapiensENSP0000038673092.652389.6057mus_spicilegusENSMSIP0000002735489.446486.5052
ENSG00000196141homo_sapiensENSP0000038673093.548490.3226cricetulus_griseus_chok1gshdENSCGRP0000101979392.389489.2035
ENSG00000196141homo_sapiensENSP0000038673089.605786.7383pteropus_vampyrusENSPVAP0000000140091.407788.4826
ENSG00000196141homo_sapiensENSP0000038673090.143486.3799myotis_lucifugusENSMLUP0000000601390.467686.6907
ENSG00000196141homo_sapiensENSP0000038673084.587876.7025vombatus_ursinusENSVURP0001002169585.198677.2563
ENSG00000196141homo_sapiensENSP0000038673095.519792.8315rhinolophus_ferrumequinumENSRFEP0001003351390.492487.9457
ENSG00000196141homo_sapiensENSP0000038673095.340592.2939neovison_visonENSNVIP0000001288290.322687.4363
ENSG00000196141homo_sapiensENSP0000038673096.057493.5484bos_taurusENSBTAP0000005756587.868985.5738
ENSG00000196141homo_sapiensENSP0000038673090.322683.5125heterocephalus_glaber_femaleENSHGLP0000002158385.568879.1171
ENSG00000196141homo_sapiensENSP0000038673099.283298.3871rhinopithecus_bietiENSRBIP0000000046097.879996.9965
ENSG00000196141homo_sapiensENSP0000038673096.236693.9068canis_lupus_dingoENSCAFP0002000556296.236693.9068
ENSG00000196141homo_sapiensENSP0000038673096.59593.5484sciurus_vulgarisENSSVLP0000500448495.398292.3894
ENSG00000196141homo_sapiensENSP0000038673084.76776.5233phascolarctos_cinereusENSPCIP0000003964884.163775.9786
ENSG00000196141homo_sapiensENSP0000038673063.620160.2151procavia_capensisENSPCAP0000000818765.619262.1072
ENSG00000196141homo_sapiensENSP0000038673093.369290.681nannospalax_galiliENSNGAP0000000627890.451487.8472
ENSG00000196141homo_sapiensENSP0000038673096.236693.7276bos_grunniensENSBGRP0000004267394.876392.4028
ENSG00000196141homo_sapiensENSP0000038673092.652387.276chinchilla_lanigeraENSCLAP0000001921587.183882.1248
ENSG00000196141homo_sapiensENSP0000038673096.415893.5484cervus_hanglu_yarkandensisENSCHYP0000001758095.05392.2262
ENSG00000196141homo_sapiensENSP0000038673095.698993.0107catagonus_wagneriENSCWAP0000001139995.698993.0107
ENSG00000196141homo_sapiensENSP0000038673095.878193.19ictidomys_tridecemlineatusENSSTOP0000002035794.356391.7108
ENSG00000196141homo_sapiensENSP0000038673094.08691.2186otolemur_garnettiiENSOGAP0000001103393.250490.4085
ENSG00000196141homo_sapiensENSP0000038673097.849597.491cebus_imitatorENSCCAP0000003175092.857192.517
ENSG00000196141homo_sapiensENSP0000038673095.698993.0107urocitellus_parryiiENSUPAP0001001994295.870793.1777
ENSG00000196141homo_sapiensENSP0000038673096.057493.3692moschus_moschiferusENSMMSP0000001613094.699692.0495
ENSG00000196141homo_sapiensENSP0000038673099.283298.3871rhinopithecus_roxellanaENSRROP0000003550297.879996.9965
ENSG00000196141homo_sapiensENSP0000038673093.369289.6057mus_pahariMGP_PahariEiJ_P007304490.138486.5052
ENSG00000196141homo_sapiensENSP0000038673097.670296.2366propithecus_coquereliENSPCOP0000000918892.687191.3265
ENSG00000196141homo_sapiensENSP0000038673022.04312.724caenorhabditis_elegansY71F9AL.9.139.17222.6115
ENSG00000196141homo_sapiensENSP0000038673041.756327.7778ciona_intestinalisENSCINP0000001127642.286828.1307
ENSG00000196141homo_sapiensENSP0000038673046.774233.871petromyzon_marinusENSPMAP0000001028647.282634.2391
ENSG00000196141homo_sapiensENSP0000038673031.720422.7599eptatretus_burgeriENSEBUP0000002784639.333328.2222
ENSG00000196141homo_sapiensENSP0000038673018.817211.828eptatretus_burgeriENSEBUP0000001793553.571433.6735
ENSG00000196141homo_sapiensENSP000003867308.960577.52688callorhinchus_miliiENSCMIP0000000330478.12565.625
ENSG00000196141homo_sapiensENSP0000038673038.351328.6738callorhinchus_miliiENSCMIP0000002973956.613842.328
ENSG00000196141homo_sapiensENSP0000038673058.243743.0108latimeria_chalumnaeENSLACP0000002067661.436745.3686
ENSG00000196141homo_sapiensENSP0000038673034.587822.2222xenopus_tropicalisENSXETP0000006800048.492531.1558
ENSG00000196141homo_sapiensENSP0000038673078.136267.0251chrysemys_picta_belliiENSCPBP0000001600968.338658.6207
ENSG00000196141homo_sapiensENSP0000038673048.924739.4265sphenodon_punctatusENSSPUP0000000203078.901763.5838
ENSG00000196141homo_sapiensENSP0000038673076.523365.233crocodylus_porosusENSCPRP0000501295477.215265.8228
ENSG00000196141homo_sapiensENSP0000038673041.397934.4086laticauda_laticaudataENSLLTP0000001488970.426858.5366
ENSG00000196141homo_sapiensENSP0000038673059.677447.8495notechis_scutatusENSNSUP0000001883766.334753.1873
ENSG00000196141homo_sapiensENSP0000038673068.100454.8387pseudonaja_textilisENSPTXP0000000602466.317653.4031
ENSG00000196141homo_sapiensENSP0000038673069.53459.319anas_platyrhynchos_platyrhynchosENSAPLP0000000822276.37865.1575
ENSG00000196141homo_sapiensENSP0000038673077.240166.3082gallus_gallusENSGALP0001003569972.073661.8729
ENSG00000196141homo_sapiensENSP0000038673055.017944.2652meleagris_gallopavoENSMGAP0000000733567.030653.9301
ENSG00000196141homo_sapiensENSP0000038673077.419466.3082serinus_canariaENSSCAP0000000328077.978366.787
ENSG00000196141homo_sapiensENSP0000038673077.777866.3082parus_majorENSPMJP0000000471678.339366.787
ENSG00000196141homo_sapiensENSP0000038673073.835161.6487anolis_carolinensisENSACAP0000001580072.663160.6702
ENSG00000196141homo_sapiensENSP0000038673068.817255.3763naja_najaENSNNAP0000002119968.940855.4758
ENSG00000196141homo_sapiensENSP0000038673072.401460.0358podarcis_muralisENSPMRP0000000761572.401460.0358
ENSG00000196141homo_sapiensENSP0000038673076.702566.129geospiza_fortisENSGFOP0000000036977.256366.6065
ENSG00000196141homo_sapiensENSP0000038673076.523365.4122taeniopygia_guttataENSTGUP0000001078977.495566.2432
ENSG00000196141homo_sapiensENSP0000038673075.089662.724salvator_merianaeENSSMRP0000002620275.359762.9496
ENSG00000196141homo_sapiensENSP0000038673015.591413.2616pelodiscus_sinensisENSPSIP000000021427563.7931
ENSG00000196141homo_sapiensENSP0000038673076.344165.5914pelodiscus_sinensisENSPSIP0000002046778.45367.4033
ENSG00000196141homo_sapiensENSP0000038673078.136267.2043gopherus_evgoodeiENSGEVP0000502059478.558667.5676
ENSG00000196141homo_sapiensENSP0000038673066.12956.0932chelonoidis_abingdoniiENSCABP0000000035674.847963.4888
ENSG00000196141homo_sapiensENSP0000038673077.419465.7706struthio_camelus_australisENSSCUP0000002247875.524564.1608
ENSG00000196141homo_sapiensENSP0000038673076.881765.7706anser_brachyrhynchusENSABRP0000000948277.297366.1261
ENSG00000196141homo_sapiensENSP0000038673077.240166.129strigops_habroptilaENSSHBP0000502316177.657766.4865
ENSG00000196141homo_sapiensENSP0000038673078.494667.3835terrapene_carolina_triunguisENSTMTP0000001301875.909965.1646
ENSG00000196141homo_sapiensENSP0000038673077.240165.7706aquila_chrysaetos_chrysaetosENSACCP0002000354277.657766.1261
ENSG00000196141homo_sapiensENSP0000038673075.268864.8745ficedula_albicollisENSFALP0000000439972.413862.4138
ENSG00000196141homo_sapiensENSP0000038673060.215150.3584coturnix_japonicaENSCJPP0000501731676.537664.0091
ENSG00000196141homo_sapiensENSP0000038673029.928320.7885leptobrachium_leishanenseENSLLEP0000003894941.959829.1457

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0003723enables RNA binding1HDAHomo_sapiens(9606)Function
GO:0005654located_in nucleoplasm1IDAHomo_sapiens(9606)Component
GO:0005730located_in nucleolus1IDAHomo_sapiens(9606)Component
GO:0005737is_active_in cytoplasm1IBAHomo_sapiens(9606)Component
GO:0005829located_in cytosol1IDAHomo_sapiens(9606)Component
GO:0032991part_of protein-containing complex1IDAHomo_sapiens(9606)Component

Expression