Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases SARS-COV-2
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions N.A.
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000187244 Gene ID 4059 Accession 6722
Symbol BCAM Alias AU;LU;B-CAM;CD239;MSK19;F8/G253 Full Name basal cell adhesion molecule (Lutheran blood group)
Status Confidence Length 12351 bases Strand Plus strand
Position 19 : 44809071 - 44821421 RNA binding domain N.A.
Summary This gene encodes Lutheran blood group glycoprotein, a member of the immunoglobulin superfamily and a receptor for the extracellular matrix protein, laminin. The protein contains five extracellular immunoglobulin domains, a single transmembrane domain, and a short C-terminal cytoplasmic tail. This protein may play a role in epithelial cell cancer and in vaso-occlusion of red blood cells in sickle cell disease. Polymorphisms in this gene define some of the antigens in the Lutheran system and also the Auberger system. Inactivating variants of this gene result in the recessive Lutheran null phenotype, Lu(a-b-), of the Lutheran blood group. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2012]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
BCAM-209 ENST00000611077 3414 588aa ENSP00000481153
BCAM-201 ENST00000270233 2409 628aa ENSP00000270233
BCAM-202 ENST00000588303 914 No protein -
BCAM-208 ENST00000591520 862 286aa ENSP00000467100
BCAM-203 ENST00000588603 904 No protein -
BCAM-206 ENST00000590108 429 No protein -
BCAM-207 ENST00000590196 518 61aa ENSP00000468189
BCAM-205 ENST00000589558 611 No protein -
BCAM-204 ENST00000588714 723 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
22755Anthropometry1.9610000E-005-
103914Waist-Hip Ratio4E-623192594

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0004888enables transmembrane signaling receptor activity1TASHomo_sapiens(9606)Function
GO:0005055enables laminin receptor activity2IBA,IMPHomo_sapiens(9606)Function
GO:0005515enables protein binding2IDA,IPIHomo_sapiens(9606)Function
GO:0005576located_in extracellular region1HDAHomo_sapiens(9606)Component
GO:0005886is_active_in plasma membrane1IBAHomo_sapiens(9606)Component
GO:0007155involved_in cell adhesion1TASHomo_sapiens(9606)Process
GO:0007160involved_in cell-matrix adhesion1IMPHomo_sapiens(9606)Process
GO:0007165involved_in signal transduction1TASHomo_sapiens(9606)Process
GO:0009897located_in external side of plasma membrane1ICHomo_sapiens(9606)Component
GO:0043236enables laminin binding1IMPHomo_sapiens(9606)Function
GO:0062023located_in collagen-containing extracellular matrix1HDAHomo_sapiens(9606)Component
GO:0070062located_in extracellular exosome1HDAHomo_sapiens(9606)Component

Expression