Functions and Diseases

RBP Type Canonical_RBPs
Diseases Cancer
Drug N.A.
Main interacting RNAs mRNA
Moonlighting functions N.A.
Localizations Nucleoli
BulkPerturb-seq N.A.

Description

Ensembl ID ENSG00000184735 Gene ID 168400 Accession 20083
Symbol DDX53 Alias CAGE;CT26 Full Name DEAD-box helicase 53
Status Confidence Length 3630 bases Strand Plus strand
Position X : 22999960 - 23003589 RNA binding domain DEAD , KH_1
Summary This intronless gene encodes a protein which contains several domains found in members of the DEAD-box helicase protein family. Other members of this protein family participate in ATP-dependent RNA unwinding. [provided by RefSeq, Sep 2011]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000368667 DEAD PF00270 1.6e-42 1
ENSP00000368667 KH_1 PF00013 8.7e-11 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal
32077621 Glycyrrhizic-Acid-Based Carbon Dots with High Antiviral Activity by Multisite Inhibition Mechanisms. Ting Tong 2020-04-01 Small (Weinheim an der Bergstrasse, Germany)

Transcripts

Name Transcript ID bp Protein Translation ID
DDX53-201 ENST00000327968 3630 631aa ENSP00000368667

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000184735homo_sapiensENSP0000037947548.598125.2336homo_sapiensENSP0000036866732.963617.1157
ENSG00000184735homo_sapiensENSP0000038553639.917728.8066homo_sapiensENSP0000036866746.117333.2805
ENSG00000184735homo_sapiensENSP0000026323934.477619.403homo_sapiensENSP0000036866736.608620.6022
ENSG00000184735homo_sapiensENSP0000049764146.715328.2238homo_sapiensENSP0000036866730.427918.3835
ENSG00000184735homo_sapiensENSP0000048268031.63418.5621homo_sapiensENSP0000036866738.351822.504
ENSG00000184735homo_sapiensENSP0000029383148.768529.064homo_sapiensENSP0000036866731.378818.7005
ENSG00000184735homo_sapiensENSP0000030611741.213421.7573homo_sapiensENSP0000036866731.220316.4818
ENSG00000184735homo_sapiensENSP0000028807141.127321.7119homo_sapiensENSP0000036866731.220316.4818
ENSG00000184735homo_sapiensENSP0000048149528.172315.9488homo_sapiensENSP0000036866738.351821.7116
ENSG00000184735homo_sapiensENSP0000041653429.069817.0543homo_sapiensENSP0000036866747.543627.8922
ENSG00000184735homo_sapiensENSP0000036123229.356616.3539homo_sapiensENSP0000036866734.706819.3344
ENSG00000184735homo_sapiensENSP0000049264315.1887.89474homo_sapiensENSP0000036866732.012716.6403
ENSG00000184735homo_sapiensENSP0000023814631.666718.5homo_sapiensENSP0000036866730.110917.5911
ENSG00000184735homo_sapiensENSP0000022579247.55733.7134homo_sapiensENSP0000036866746.275832.8051
ENSG00000184735homo_sapiensENSP0000033046038.772221.0016homo_sapiensENSP0000036866738.034920.6022
ENSG00000184735homo_sapiensENSP0000026357637.474121.5321homo_sapiensENSP0000036866728.684616.4818
ENSG00000184735homo_sapiensENSP0000038049530.630617.2673homo_sapiensENSP0000036866732.329618.225
ENSG00000184735homo_sapiensENSP0000031434823.542913.7143homo_sapiensENSP0000036866732.646619.0174
ENSG00000184735homo_sapiensENSP0000034612031.034518.1354homo_sapiensENSP0000036866738.510322.504
ENSG00000184735homo_sapiensENSP0000037457433.04919.936homo_sapiensENSP0000036866749.128429.6355
ENSG00000184735homo_sapiensENSP0000035871623.786413.835homo_sapiensENSP0000036866731.061818.0666
ENSG00000184735homo_sapiensENSP0000044226641.200824.4306homo_sapiensENSP0000036866731.537218.7005
ENSG00000184735homo_sapiensENSP0000036268730.664917.232homo_sapiensENSP0000036866735.816220.1268
ENSG00000184735homo_sapiensENSP0000047950439.732923.7062homo_sapiensENSP0000036866737.717922.504
ENSG00000184735homo_sapiensENSP0000035936174.691459.1049homo_sapiensENSP0000036866776.703660.6973
ENSG00000184735homo_sapiensENSP0000032638148.40329.2383homo_sapiensENSP0000036866731.220318.859
ENSG00000184735homo_sapiensENSP0000025877233.63818.83homo_sapiensENSP0000036866729.160116.3233
ENSG00000184735homo_sapiensENSP0000049404038.066523.2628homo_sapiensENSP0000036866739.936624.4057
ENSG00000184735homo_sapiensENSP0000033672538.030322.7273homo_sapiensENSP0000036866739.778123.7718
ENSG00000184735homo_sapiensENSP0000024700340.993824.4306homo_sapiensENSP0000036866731.378818.7005
ENSG00000184735homo_sapiensENSP0000033034937.781324.9196homo_sapiensENSP0000036866737.242524.5642
ENSG00000184735homo_sapiensENSP0000024277648.711925.5269homo_sapiensENSP0000036866732.963617.2742
ENSG00000184735homo_sapiensENSP0000023308430.270316.0811homo_sapiensENSP0000036866735.499218.859
ENSG00000184735homo_sapiensENSP0000030407227.355314.5289homo_sapiensENSP0000036866738.193320.2853
ENSG00000184735homo_sapiensENSP0000035069842.637427.2527homo_sapiensENSP0000036866730.744919.6513
ENSG00000184735homo_sapiensENSP0000031072331.951218.9024homo_sapiensENSP0000036866741.521424.5642
ENSG00000184735homo_sapiensENSP0000033234038.333322.2222homo_sapiensENSP0000036866732.805119.0174
ENSG00000184735homo_sapiensENSP0000042483834.668521.547homo_sapiensENSP0000036866739.778124.7227

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000184735homo_sapiensENSP0000036866798.256796.8304pan_paniscusENSPPAP0000000151698.256796.8304
ENSG00000184735homo_sapiensENSP0000036866796.03894.7702pongo_abeliiENSPPYP0000002258796.343495.0715
ENSG00000184735homo_sapiensENSP0000036866798.256796.5135pan_troglodytesENSPTRP0000004747598.256796.5135
ENSG00000184735homo_sapiensENSP0000036866793.977890.1743macaca_fascicularisENSMFAP0000005247893.829190.0316
ENSG00000184735homo_sapiensENSP0000036866793.819390.0158macaca_mulattaENSMMUP0000006522793.670989.8734
ENSG00000184735homo_sapiensENSP0000036866793.185488.9065papio_anubisENSPANP0000005592693.03888.7658
ENSG00000184735homo_sapiensENSP0000036866793.819389.6989chlorocebus_sabaeusENSCSAP0000001903993.670989.557
ENSG00000184735homo_sapiensENSP0000036866781.299568.3043cervus_hanglu_yarkandensisENSCHYP0000003405981.042768.0885
ENSG00000184735homo_sapiensENSP0000036866788.114181.6165cebus_imitatorENSCCAP0000001274588.53582.0064
ENSG00000184735homo_sapiensENSP0000036866788.114181.6165cebus_imitatorENSCCAP0000000754988.53582.0064

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0003723enables RNA binding1IBAHomo_sapiens(9606)Function
GO:0003724enables RNA helicase activity1IBAHomo_sapiens(9606)Function
GO:0005524enables ATP binding1IEAHomo_sapiens(9606)Function
GO:0005654located_in nucleoplasm1IDAHomo_sapiens(9606)Component
GO:0005730located_in nucleolus1IDAHomo_sapiens(9606)Component
GO:0005829located_in cytosol1IDAHomo_sapiens(9606)Component
GO:0016887enables ATP hydrolysis activity1IEAHomo_sapiens(9606)Function
GO:0043231located_in intracellular membrane-bounded organelle1IDAHomo_sapiens(9606)Component

Expression