Functions and Diseases

RBP Type Canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs mRNA
Moonlighting functions N.A.
Localizations P-body
BulkPerturb-seq N.A.

Description

Ensembl ID ENSG00000179172 Gene ID 343069 Accession 29295
Symbol HNRNPCL1 Alias HNRPCL1 Full Name heterogeneous nuclear ribonucleoprotein C like 1
Status Confidence Length 1344 bases Strand Minus strand
Position 1 : 12847377 - 12848720 RNA binding domain RRM_1
Summary Enables identical protein binding activity. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000365370 RRM_1 PF00076 1.7e-11 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
HNRNPCL1-201 ENST00000317869 1134 293aa ENSP00000365370

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000179172homo_sapiensENSP0000043036760.137546.0481homo_sapiensENSP0000036537059.72745.7338
ENSG00000179172homo_sapiensENSP0000024619457.843141.1765homo_sapiensENSP0000036537060.409643.0034
ENSG00000179172homo_sapiensENSP0000047920398.634896.2457homo_sapiensENSP0000036537098.634896.2457
ENSG00000179172homo_sapiensENSP0000048545095.221893.5154homo_sapiensENSP0000036537095.221893.5154
ENSG00000179172homo_sapiensENSP0000047801795.221893.5154homo_sapiensENSP0000036537095.221893.5154
ENSG00000179172homo_sapiensENSP0000045054494.880590.785homo_sapiensENSP0000036537094.880590.785
ENSG00000179172homo_sapiensENSP00000488130100100homo_sapiensENSP00000365370100100

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000179172homo_sapiensENSP0000036537087.37283.6177nomascus_leucogenysENSNLEP0000001743983.660180.0654
ENSG00000179172homo_sapiensENSP0000036537074.061468.6007pan_paniscusENSPPAP0000001517080.073874.1697
ENSG00000179172homo_sapiensENSP0000036537084.982981.2287pan_paniscusENSPPAP0000002166892.910488.806
ENSG00000179172homo_sapiensENSP0000036537095.221893.1741pongo_abeliiENSPPYP0000000215495.221893.1741
ENSG00000179172homo_sapiensENSP0000036537093.515490.1024pongo_abeliiENSPPYP0000004258891.638888.2943
ENSG00000179172homo_sapiensENSP0000036537070.648569.6246pan_troglodytesENSPTRP0000005002895.833394.4444
ENSG00000179172homo_sapiensENSP0000036537089.419883.959ornithorhynchus_anatinusENSOANP0000002475580.368175.4601
ENSG00000179172homo_sapiensENSP0000036537094.19889.4198sarcophilus_harrisiiENSSHAP0000000707290.196185.6209
ENSG00000179172homo_sapiensENSP0000036537058.703155.9727notamacropus_eugeniiENSMEUP0000000997456.209253.5948
ENSG00000179172homo_sapiensENSP0000036537078.839674.0614choloepus_hoffmanniENSCHOP0000000888683.695778.6232
ENSG00000179172homo_sapiensENSP0000036537094.19888.3959erinaceus_europaeusENSEEUP0000000680789.610484.0909
ENSG00000179172homo_sapiensENSP0000036537034.129732.0819echinops_telfairiENSETEP0000000655944.444441.7778
ENSG00000179172homo_sapiensENSP0000036537094.19889.7611callithrix_jacchusENSCJAP0000006723690.491886.2295
ENSG00000179172homo_sapiensENSP0000036537090.443784.9829cercocebus_atysENSCATP0000001507992.657387.0629
ENSG00000179172homo_sapiensENSP0000036537094.19889.7611macaca_fascicularisENSMFAP0000005652294.19889.7611
ENSG00000179172homo_sapiensENSP0000036537093.856789.7611macaca_fascicularisENSMFAP0000004527693.856789.7611
ENSG00000179172homo_sapiensENSP0000036537090.102485.6655macaca_nemestrinaENSMNEP0000003913478.80674.9254
ENSG00000179172homo_sapiensENSP0000036537087.37279.5222papio_anubisENSPANP0000005552285.618777.9264
ENSG00000179172homo_sapiensENSP0000036537090.443784.9829mandrillus_leucophaeusENSMLEP0000002518892.657387.0629
ENSG00000179172homo_sapiensENSP0000036537088.054681.9113vulpes_vulpesENSVVUP000000127587569.7674
ENSG00000179172homo_sapiensENSP0000036537084.300380.2048vulpes_vulpesENSVVUP0000001661081.2577.3026
ENSG00000179172homo_sapiensENSP0000036537093.856789.0785mus_spretusMGP_SPRETEiJ_P003828287.859483.3866
ENSG00000179172homo_sapiensENSP0000036537094.880590.4437equus_asinusENSEASP0000504694490.553786.3192
ENSG00000179172homo_sapiensENSP0000036537090.102484.9829loxodonta_africanaENSLAFP0000000782978.80674.3284
ENSG00000179172homo_sapiensENSP0000036537094.539290.1024panthera_leoENSPLOP0000001231690.22885.9935
ENSG00000179172homo_sapiensENSP0000036537094.539290.1024ailuropoda_melanoleucaENSAMEP0000000683990.22885.9935
ENSG00000179172homo_sapiensENSP0000036537094.539290.1024bos_indicus_hybridENSBIXP0000501725090.22885.9935
ENSG00000179172homo_sapiensENSP0000036537085.324281.57bos_indicus_hybridENSBIXP0000501520894.339690.1887
ENSG00000179172homo_sapiensENSP0000036537036.518831.7406oryctolagus_cuniculusENSOCUP0000004007467.721558.8608
ENSG00000179172homo_sapiensENSP0000036537094.880590.4437equus_caballusENSECAP0000001536190.553786.3192
ENSG00000179172homo_sapiensENSP0000036537086.006879.5222canis_lupus_familiarisENSCAFP0084501388584.563878.1879
ENSG00000179172homo_sapiensENSP0000036537094.539290.1024panthera_pardusENSPPRP0000001633790.22885.9935
ENSG00000179172homo_sapiensENSP0000036537094.539290.4437marmota_marmota_marmotaENSMMMP0000001638388.216684.3949
ENSG00000179172homo_sapiensENSP0000036537094.539290.1024balaenoptera_musculusENSBMSP0001001275490.22885.9935
ENSG00000179172homo_sapiensENSP0000036537094.19889.0785cavia_porcellusENSCPOP0000000133089.902385.0163
ENSG00000179172homo_sapiensENSP0000036537094.539290.1024felis_catusENSFCAP0000004391190.22885.9935
ENSG00000179172homo_sapiensENSP0000036537055.631451.8771ursus_americanusENSUAMP0000000953295.321688.8889
ENSG00000179172homo_sapiensENSP0000036537094.539289.7611monodelphis_domesticaENSMODP0000005132990.22885.6678
ENSG00000179172homo_sapiensENSP0000036537024.232121.5017bison_bison_bisonENSBBBP0000000820078.02269.2308
ENSG00000179172homo_sapiensENSP0000036537094.539290.4437sus_scrofaENSSSCP0000002448590.22886.3192
ENSG00000179172homo_sapiensENSP0000036537094.539290.785microcebus_murinusENSMICP0000003433686.024882.6087
ENSG00000179172homo_sapiensENSP0000036537093.515487.7133octodon_degusENSODEP0000000073087.539982.1086
ENSG00000179172homo_sapiensENSP0000036537084.300375.7679octodon_degusENSODEP0000002345285.467176.8166
ENSG00000179172homo_sapiensENSP0000036537093.174187.372octodon_degusENSODEP0000001086993.493187.6712
ENSG00000179172homo_sapiensENSP0000036537077.815771.6724octodon_degusENSODEP0000001736582.608776.087
ENSG00000179172homo_sapiensENSP0000036537088.737282.9352octodon_degusENSODEP0000000147785.526379.9342
ENSG00000179172homo_sapiensENSP0000036537093.174186.6894octodon_degusENSODEP0000002670088.925182.7362
ENSG00000179172homo_sapiensENSP0000036537074.061465.529jaculus_jaculusENSJJAP0000002020687.854277.7328
ENSG00000179172homo_sapiensENSP0000036537094.539290.1024ovis_aries_rambouilletENSOARP0002002019090.22885.9935
ENSG00000179172homo_sapiensENSP0000036537094.19889.7611ursus_maritimusENSUMAP0000000473890.196185.9477
ENSG00000179172homo_sapiensENSP0000036537080.887476.1092ochotona_princepsENSOPRP0000000256777.198772.6384
ENSG00000179172homo_sapiensENSP0000036537094.880590.1024physeter_catodonENSPCTP0000500587190.849786.2745
ENSG00000179172homo_sapiensENSP0000036537093.856789.0785mus_caroliMGP_CAROLIEiJ_P003656287.859483.3866
ENSG00000179172homo_sapiensENSP0000036537093.856789.0785mus_musculusENSMUSP0000010723787.859483.3866
ENSG00000179172homo_sapiensENSP0000036537085.665579.5222dipodomys_ordiiENSDORP0000002123887.152880.9028
ENSG00000179172homo_sapiensENSP0000036537083.276578.8396mustela_putorius_furoENSMPUP0000001660390.706385.8736
ENSG00000179172homo_sapiensENSP0000036537079.522275.0853aotus_nancymaaeENSANAP0000000246993.288
ENSG00000179172homo_sapiensENSP0000036537094.539289.7611saimiri_boliviensis_boliviensisENSSBOP0000001624686.292881.9315
ENSG00000179172homo_sapiensENSP0000036537080.204874.0614saimiri_boliviensis_boliviensisENSSBOP0000002335588.679281.8868
ENSG00000179172homo_sapiensENSP0000036537094.539290.1024vicugna_pacosENSVPAP0000000682390.22885.9935
ENSG00000179172homo_sapiensENSP0000036537086.689479.8635chlorocebus_sabaeusENSCSAP0000001736986.689479.8635
ENSG00000179172homo_sapiensENSP0000036537060.068353.5836tupaia_belangeriENSTBEP0000001545377.19368.8596
ENSG00000179172homo_sapiensENSP0000036537050.853249.1468tupaia_belangeriENSTBEP0000000993979.679177.0053
ENSG00000179172homo_sapiensENSP0000036537072.696266.5529mesocricetus_auratusENSMAUP0000000006582.879475.8755
ENSG00000179172homo_sapiensENSP0000036537030.034128.6689phocoena_sinusENSPSNP0000000209353.658551.2195
ENSG00000179172homo_sapiensENSP0000036537094.539290.1024camelus_dromedariusENSCDRP0000500341590.22885.9935
ENSG00000179172homo_sapiensENSP0000036537082.252673.7201carlito_syrichtaENSTSYP0000002500175.312567.5
ENSG00000179172homo_sapiensENSP0000036537090.443784.6416carlito_syrichtaENSTSYP0000002891077.485472.5146
ENSG00000179172homo_sapiensENSP0000036537069.965963.4812carlito_syrichtaENSTSYP0000001575275.925968.8889
ENSG00000179172homo_sapiensENSP0000036537094.539290.1024panthera_tigris_altaicaENSPTIP0000002522190.22885.9935
ENSG00000179172homo_sapiensENSP0000036537093.856789.0785rattus_norvegicusENSRNOP0000007887489.869385.2941
ENSG00000179172homo_sapiensENSP0000036537094.539290.785prolemur_simusENSPSMP0000001697790.22886.645
ENSG00000179172homo_sapiensENSP0000036537093.856789.0785microtus_ochrogasterENSMOCP0000000206791.362186.711
ENSG00000179172homo_sapiensENSP0000036537048.122947.099microtus_ochrogasterENSMOCP0000002464187.03785.1852
ENSG00000179172homo_sapiensENSP0000036537076.109271.3311sorex_araneusENSSARP0000000334172.875868.3007
ENSG00000179172homo_sapiensENSP0000036537032.081927.6451peromyscus_maniculatus_bairdiiENSPEMP0000001934973.437563.2812
ENSG00000179172homo_sapiensENSP0000036537024.232120.4778bos_mutusENSBMUP0000002871578.02265.9341
ENSG00000179172homo_sapiensENSP0000036537093.856789.0785mus_spicilegusENSMSIP0000002600387.859483.3866
ENSG00000179172homo_sapiensENSP0000036537074.402767.5768cricetulus_griseus_chok1gshdENSCGRP0000102721889.711981.4815
ENSG00000179172homo_sapiensENSP0000036537086.348182.2526pteropus_vampyrusENSPVAP0000000425982.410478.5016
ENSG00000179172homo_sapiensENSP0000036537094.19889.4198myotis_lucifugusENSMLUP0000000716693.877589.1156
ENSG00000179172homo_sapiensENSP0000036537094.539289.7611vombatus_ursinusENSVURP0001002628090.22885.6678
ENSG00000179172homo_sapiensENSP0000036537094.539290.1024rhinolophus_ferrumequinumENSRFEP0001002094694.217789.7959
ENSG00000179172homo_sapiensENSP0000036537094.539290.1024rhinolophus_ferrumequinumENSRFEP0001002782590.22885.9935
ENSG00000179172homo_sapiensENSP0000036537094.539290.1024neovison_visonENSNVIP0000001826394.217789.7959
ENSG00000179172homo_sapiensENSP0000036537094.539290.1024bos_taurusENSBTAP0000000166894.217789.7959
ENSG00000179172homo_sapiensENSP0000036537094.539289.0785heterocephalus_glaber_femaleENSHGLP0000003045088.216683.121
ENSG00000179172homo_sapiensENSP0000036537085.324280.2048rhinopithecus_bietiENSRBIP0000000128784.459579.3919
ENSG00000179172homo_sapiensENSP0000036537088.054681.9113canis_lupus_dingoENSCAFP000200181427569.7674
ENSG00000179172homo_sapiensENSP0000036537094.539290.4437sciurus_vulgarisENSSVLP0000500155690.22886.3192
ENSG00000179172homo_sapiensENSP0000036537094.19889.4198phascolarctos_cinereusENSPCIP0000002670194.19889.4198
ENSG00000179172homo_sapiensENSP0000036537076.450572.6962procavia_capensisENSPCAP0000000282473.442669.8361
ENSG00000179172homo_sapiensENSP0000036537082.935275.0853nannospalax_galiliENSNGAP0000001742387.410179.1367
ENSG00000179172homo_sapiensENSP0000036537091.126386.3481nannospalax_galiliENSNGAP0000002134090.508585.7627
ENSG00000179172homo_sapiensENSP0000036537072.354965.529nannospalax_galiliENSNGAP0000001757977.941270.5882
ENSG00000179172homo_sapiensENSP0000036537072.354965.529nannospalax_galiliENSNGAP0000001798880.608473.0038
ENSG00000179172homo_sapiensENSP0000036537024.232120.4778bos_grunniensENSBGRP0000004142178.02265.9341
ENSG00000179172homo_sapiensENSP0000036537094.539289.4198chinchilla_lanigeraENSCLAP0000000124390.22885.342
ENSG00000179172homo_sapiensENSP0000036537094.539290.1024cervus_hanglu_yarkandensisENSCHYP0000003291494.217789.7959
ENSG00000179172homo_sapiensENSP0000036537094.539290.1024cervus_hanglu_yarkandensisENSCHYP0000001822590.22885.9935
ENSG00000179172homo_sapiensENSP0000036537094.539290.4437catagonus_wagneriENSCWAP0000000752390.22886.3192
ENSG00000179172homo_sapiensENSP0000036537073.720166.5529ictidomys_tridecemlineatusENSSTOP0000001737472.483265.4362
ENSG00000179172homo_sapiensENSP0000036537039.590436.1775otolemur_garnettiiENSOGAP0000002039578.378471.6216
ENSG00000179172homo_sapiensENSP0000036537089.419885.6655cebus_imitatorENSCCAP0000002414191.929888.0702
ENSG00000179172homo_sapiensENSP0000036537060.068353.5836urocitellus_parryiiENSUPAP000100272398071.3636
ENSG00000179172homo_sapiensENSP0000036537027.645125.256moschus_moschiferusENSMMSP0000002018872.97366.6667
ENSG00000179172homo_sapiensENSP0000036537091.808987.372rhinopithecus_roxellanaENSRROP0000000181688.486884.2105
ENSG00000179172homo_sapiensENSP0000036537091.808987.0307mus_pahariMGP_PahariEiJ_P008467987.622183.0619
ENSG00000179172homo_sapiensENSP0000036537094.539290.785propithecus_coquereliENSPCOP0000002168586.024882.6087
ENSG00000179172homo_sapiensENSP0000036537085.665571.3311latimeria_chalumnaeENSLACP0000001385482.838368.9769
ENSG00000179172homo_sapiensENSP0000036537083.276575.4266xenopus_tropicalisENSXETP0000006056271.13764.4315
ENSG00000179172homo_sapiensENSP0000036537085.324279.8635chrysemys_picta_belliiENSCPBP0000001548689.285783.5714
ENSG00000179172homo_sapiensENSP0000036537091.467684.9829sphenodon_punctatusENSSPUP0000002445090.847584.4068
ENSG00000179172homo_sapiensENSP0000036537090.443783.6177laticauda_laticaudataENSLLTP0000000527079.341373.3533
ENSG00000179172homo_sapiensENSP0000036537090.78583.959notechis_scutatusENSNSUP0000000610079.640773.6527
ENSG00000179172homo_sapiensENSP0000036537090.78583.959pseudonaja_textilisENSPTXP0000002041288.079581.457
ENSG00000179172homo_sapiensENSP0000036537090.78583.959pseudonaja_textilisENSPTXP0000001946288.079581.457
ENSG00000179172homo_sapiensENSP0000036537059.044449.4881serinus_canariaENSSCAP0000000128067.843156.8627
ENSG00000179172homo_sapiensENSP0000036537048.464242.6621parus_majorENSPMJP0000001798957.723650.813
ENSG00000179172homo_sapiensENSP0000036537090.443783.6177anolis_carolinensisENSACAP0000003273067.948762.8205
ENSG00000179172homo_sapiensENSP0000036537091.126384.3003naja_najaENSNNAP0000001618279.940173.9521
ENSG00000179172homo_sapiensENSP0000036537084.641676.4505naja_najaENSNNAP0000001192085.517277.2414
ENSG00000179172homo_sapiensENSP0000036537090.78583.6177podarcis_muralisENSPMRP0000002112088.079581.1258
ENSG00000179172homo_sapiensENSP0000036537079.863570.9898taeniopygia_guttataENSTGUP0000002620280.689771.7241
ENSG00000179172homo_sapiensENSP0000036537090.443783.959salvator_merianaeENSSMRP0000000654287.748381.457
ENSG00000179172homo_sapiensENSP0000036537091.808986.0068pelodiscus_sinensisENSPSIP0000001360489.072883.4437
ENSG00000179172homo_sapiensENSP0000036537092.150286.3481gopherus_evgoodeiENSGEVP0000502744889.40483.7748
ENSG00000179172homo_sapiensENSP0000036537092.150286.3481chelonoidis_abingdoniiENSCABP0000001694289.40483.7748
ENSG00000179172homo_sapiensENSP0000036537085.665575.4266strigops_habroptilaENSSHBP0000501795282.295172.459
ENSG00000179172homo_sapiensENSP0000036537084.300378.4983terrapene_carolina_triunguisENSTMTP0000001372489.492883.3333
ENSG00000179172homo_sapiensENSP0000036537083.95974.0614leptobrachium_leishanenseENSLLEP0000003158886.925876.6784

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0003723enables RNA binding2HDA,IBAHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005634is_active_in nucleus1IBAHomo_sapiens(9606)Component
GO:0042802enables identical protein binding1IPIHomo_sapiens(9606)Function
GO:1990904part_of ribonucleoprotein complex1IEAHomo_sapiens(9606)Component

Expression