Functions and Diseases

RBP Type Canonical_RBPs
Diseases Cancer
Drug N.A.
Main interacting RNAs mRNA
Moonlighting functions N.A.
Localizations N.A.
BulkPerturb-seq N.A.

Description

Ensembl ID ENSG00000177679 Gene ID 222183 Accession 26729
Symbol SRRM3 Alias NA Full Name serine/arginine repetitive matrix 3
Status Confidence Length 85392 bases Strand Plus strand
Position 7 : 76201896 - 76287287 RNA binding domain cwf21 , SRRM_C
Summary Predicted to enable mRNA binding activity. [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000480851 cwf21 PF08312 8e-14 1
ENSP00000480851 SRRM_C PF15230 5.5e-23 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal
36759540 Pancreatic microexons regulate islet function and glucose homeostasis. Jonàs Juan-Mateu 2023-02-01 Nature metabolism

Transcripts

Name Transcript ID bp Protein Translation ID
SRRM3-204 ENST00000611745 3617 653aa ENSP00000480851
SRRM3-203 ENST00000479294 549 No protein -
SRRM3-201 ENST00000464752 2797 109aa ENSP00000483698
SRRM3-202 ENST00000479284 589 No protein -
SRRM3-205 ENST00000612155 2150 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000177679

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000177679homo_sapiensENSP0000048085174.272671.5161nomascus_leucogenysENSNLEP0000001026885.68982.5088
ENSG00000177679homo_sapiensENSP0000048085199.081298.7749pongo_abeliiENSPPYP0000001958499.081298.7749
ENSG00000177679homo_sapiensENSP0000048085199.387498.928pan_troglodytesENSPTRP0000003304099.387498.928
ENSG00000177679homo_sapiensENSP0000048085176.722875.1914gorilla_gorillaENSGGOP0000003159489.784987.9928
ENSG00000177679homo_sapiensENSP0000048085142.725935.5283ornithorhynchus_anatinusENSOANP0000004432956.938847.3469
ENSG00000177679homo_sapiensENSP0000048085143.491639.8162sarcophilus_harrisiiENSSHAP0000004079583.529476.4706
ENSG00000177679homo_sapiensENSP0000048085153.445649.3109notamacropus_eugeniiENSMEUP0000001278658.754254.2088
ENSG00000177679homo_sapiensENSP0000048085180.24575.4977dasypus_novemcinctusENSDNOP0000003502280.615475.8462
ENSG00000177679homo_sapiensENSP0000048085197.243596.1715callithrix_jacchusENSCJAP0000003000097.243596.1715
ENSG00000177679homo_sapiensENSP0000048085179.479378.2542cercocebus_atysENSCATP0000004106191.696190.2827
ENSG00000177679homo_sapiensENSP0000048085197.702997.0904macaca_mulattaENSMMUP0000005161997.553596.9419
ENSG00000177679homo_sapiensENSP0000048085176.722874.8851papio_anubisENSPANP0000000382986.828484.7487
ENSG00000177679homo_sapiensENSP0000048085150.229749.1577tursiops_truncatusENSTTRP0000001406556.845855.6326
ENSG00000177679homo_sapiensENSP0000048085192.189989.1271mus_spretusMGP_SPRETEiJ_P007411992.901289.8148
ENSG00000177679homo_sapiensENSP0000048085181.623379.4793equus_asinusENSEASP0000504389287.664585.3618
ENSG00000177679homo_sapiensENSP0000048085183.46179.7856capra_hircusENSCHIP0000001213789.638285.6908
ENSG00000177679homo_sapiensENSP0000048085154.670746.0949loxodonta_africanaENSLAFP0000002132354.255345.7447
ENSG00000177679homo_sapiensENSP0000048085194.640192.6493panthera_leoENSPLOP0000003063294.351192.3664
ENSG00000177679homo_sapiensENSP0000048085150.842348.6983ailuropoda_melanoleucaENSAMEP0000003390290.710486.8852
ENSG00000177679homo_sapiensENSP0000048085193.721391.2711bos_indicus_hybridENSBIXP0000503027994.590492.1175
ENSG00000177679homo_sapiensENSP0000048085194.793392.6493equus_caballusENSECAP0000001955694.216192.0852
ENSG00000177679homo_sapiensENSP0000048085194.946492.8025canis_lupus_familiarisENSCAFP0084500623294.512292.3781
ENSG00000177679homo_sapiensENSP0000048085174.73271.8224panthera_pardusENSPPRP0000001283287.298783.8998
ENSG00000177679homo_sapiensENSP0000048085193.568191.4242balaenoptera_musculusENSBMSP0001002893893.855691.7051
ENSG00000177679homo_sapiensENSP0000048085186.983284.6861cavia_porcellusENSCPOP0000003159091.171888.764
ENSG00000177679homo_sapiensENSP0000048085194.027692.0368felis_catusENSFCAP0000004576394.461592.4615
ENSG00000177679homo_sapiensENSP0000048085168.300261.7152monodelphis_domesticaENSMODP0000004028572.756965.7422
ENSG00000177679homo_sapiensENSP0000048085152.220550.536bison_bison_bisonENSBBBP0000001844757.796655.9322
ENSG00000177679homo_sapiensENSP0000048085187.289484.9923monodon_monocerosENSMMNP0001501071494.370991.8874
ENSG00000177679homo_sapiensENSP0000048085194.333891.7305sus_scrofaENSSSCP0000006879394.478591.8712
ENSG00000177679homo_sapiensENSP0000048085185.604983.461microcebus_murinusENSMICP0000000972795.392593.0034
ENSG00000177679homo_sapiensENSP0000048085191.271189.1271octodon_degusENSODEP0000002173992.117589.9536
ENSG00000177679homo_sapiensENSP0000048085187.289484.0735jaculus_jaculusENSJJAP0000002378187.96384.7222
ENSG00000177679homo_sapiensENSP0000048085193.721390.8116ovis_aries_rambouilletENSOARP0002003072494.590491.6538
ENSG00000177679homo_sapiensENSP0000048085144.104143.1853ochotona_princepsENSOPRP0000000768858.299657.085
ENSG00000177679homo_sapiensENSP0000048085167.228261.1026delphinapterus_leucasENSDLEP0000001072673.166766.5
ENSG00000177679homo_sapiensENSP0000048085145.482443.3384physeter_catodonENSPCTP0000501296980.926477.1117
ENSG00000177679homo_sapiensENSP0000048085149.157747.0138mus_caroliMGP_CAROLIEiJ_P007136893.859689.7661
ENSG00000177679homo_sapiensENSP0000048085192.189989.1271mus_musculusENSMUSP0000011569592.901289.8148
ENSG00000177679homo_sapiensENSP0000048085173.506970.5972aotus_nancymaaeENSANAP0000002827877.922174.8377
ENSG00000177679homo_sapiensENSP0000048085187.442686.3706chlorocebus_sabaeusENSCSAP0000001415695.484994.3144
ENSG00000177679homo_sapiensENSP0000048085188.208384.8392mesocricetus_auratusENSMAUP0000001934389.026385.626
ENSG00000177679homo_sapiensENSP0000048085177.488574.732phocoena_sinusENSPSNP0000000758482.276479.3496
ENSG00000177679homo_sapiensENSP0000048085192.649389.4334rattus_norvegicusENSRNOP0000000195793.364290.1235
ENSG00000177679homo_sapiensENSP0000048085191.730588.3614microtus_ochrogasterENSMOCP0000000321492.438389.0432
ENSG00000177679homo_sapiensENSP0000048085188.514585.1455peromyscus_maniculatus_bairdiiENSPEMP0000001184191.167287.6972
ENSG00000177679homo_sapiensENSP0000048085192.189988.974mus_spicilegusENSMSIP0000001418492.901289.6605
ENSG00000177679homo_sapiensENSP0000048085192.189988.3614cricetulus_griseus_chok1gshdENSCGRP0000100925592.901289.0432
ENSG00000177679homo_sapiensENSP0000048085167.840766.4625pteropus_vampyrusENSPVAP0000000321567.840766.4625
ENSG00000177679homo_sapiensENSP0000048085193.41591.2711rhinolophus_ferrumequinumENSRFEP0001001202992.424290.303
ENSG00000177679homo_sapiensENSP0000048085144.869843.4916bos_taurusENSBTAP0000004811793.910391.0256
ENSG00000177679homo_sapiensENSP0000048085186.983285.2986canis_lupus_dingoENSCAFP0002001630090.302188.5533
ENSG00000177679homo_sapiensENSP0000048085193.568191.4242sciurus_vulgarisENSSVLP0000502640893.855691.7051
ENSG00000177679homo_sapiensENSP0000048085149.157743.6447phascolarctos_cinereusENSPCIP0000004408276.066467.5355
ENSG00000177679homo_sapiensENSP0000048085158.499256.3553procavia_capensisENSPCAP0000001284266.666764.2234
ENSG00000177679homo_sapiensENSP0000048085193.261990.6585bos_grunniensENSBGRP0000001338694.418691.7829
ENSG00000177679homo_sapiensENSP0000048085188.514586.3706chinchilla_lanigeraENSCLAP0000001112088.379286.2385
ENSG00000177679homo_sapiensENSP0000048085150.689148.6983cervus_hanglu_yarkandensisENSCHYP0000001540375.227372.2727
ENSG00000177679homo_sapiensENSP0000048085179.479377.1822ictidomys_tridecemlineatusENSSTOP0000001271093.682390.9747
ENSG00000177679homo_sapiensENSP0000048085194.48792.0368otolemur_garnettiiENSOGAP0000001931494.342591.896
ENSG00000177679homo_sapiensENSP0000048085197.549896.7841cebus_imitatorENSCCAP0000003064197.549896.7841
ENSG00000177679homo_sapiensENSP0000048085192.955690.6585urocitellus_parryiiENSUPAP0001001951193.528591.2173
ENSG00000177679homo_sapiensENSP0000048085194.027691.1179moschus_moschiferusENSMMSP0000000877694.899591.9629
ENSG00000177679homo_sapiensENSP0000048085176.569775.9571rhinopithecus_roxellanaENSRROP0000002219491.743191.0092
ENSG00000177679homo_sapiensENSP0000048085192.036888.6677mus_pahariMGP_PahariEiJ_P005959992.746989.3519
ENSG00000177679homo_sapiensENSP0000048085193.874491.1179propithecus_coquereliENSPCOP0000003138993.874491.1179
ENSG00000177679homo_sapiensENSP0000048085155.130245.6355latimeria_chalumnaeENSLACP0000000907260.606150.1684
ENSG00000177679homo_sapiensENSP0000048085155.589643.6447lepisosteus_oculatusENSLOCP0000000339154.422842.7286
ENSG00000177679homo_sapiensENSP0000048085149.310940.4288carassius_auratusENSCARP0000000678953.488443.8538
ENSG00000177679homo_sapiensENSP0000048085150.53641.0413astyanax_mexicanusENSAMXP0000001653052.715742.8115
ENSG00000177679homo_sapiensENSP0000048085149.923440.5819ictalurus_punctatusENSIPUP0000001832952.665642.811
ENSG00000177679homo_sapiensENSP0000048085150.229741.3476esox_luciusENSELUP0000005820251.1742.1217
ENSG00000177679homo_sapiensENSP0000048085149.310941.807oncorhynchus_kisutchENSOKIP0000502090149.462441.9355
ENSG00000177679homo_sapiensENSP0000048085147.166939.2037oncorhynchus_mykissENSOMYP0000011066347.530939.5062
ENSG00000177679homo_sapiensENSP0000048085149.617241.9602oncorhynchus_mykissENSOMYP0000001718749.617241.9602
ENSG00000177679homo_sapiensENSP0000048085146.094937.6723salmo_salarENSSSAP0000014919944.658836.4985
ENSG00000177679homo_sapiensENSP0000048085149.46441.5008salmo_salarENSSSAP0000002961549.692341.6923
ENSG00000177679homo_sapiensENSP0000048085149.770341.6539salmo_truttaENSSTUP0000003923349.770341.6539
ENSG00000177679homo_sapiensENSP0000048085147.320138.7443poecilia_reticulataENSPREP0000001196748.281239.5312
ENSG00000177679homo_sapiensENSP0000048085147.013838.1317xiphophorus_maculatusENSXMAP0000003580047.968838.9062
ENSG00000177679homo_sapiensENSP0000048085148.085838.8974oryzias_latipesENSORLP0000004028150.079740.5104
ENSG00000177679homo_sapiensENSP0000048085149.157740.4288oreochromis_niloticusENSONIP0000001602349.613640.8037
ENSG00000177679homo_sapiensENSP0000048085149.157740.1225haplochromis_burtoniENSHBUP0000002395750.07840.8736
ENSG00000177679homo_sapiensENSP0000048085149.004639.8162astatotilapia_callipteraENSACLP0000000774150.078240.6886
ENSG00000177679homo_sapiensENSP0000048085149.004639.0505sparus_aurataENSSAUP0001000409749.45939.4127
ENSG00000177679homo_sapiensENSP0000048085149.617240.8882lates_calcariferENSLCAP0001003798349.693340.9509
ENSG00000177679homo_sapiensENSP0000048085161.408952.6799xenopus_tropicalisENSXETP0000008212563.349154.3444
ENSG00000177679homo_sapiensENSP0000048085165.237456.8147chrysemys_picta_belliiENSCPBP0000004042867.086658.4252
ENSG00000177679homo_sapiensENSP0000048085135.834632.6187sphenodon_punctatusENSSPUP0000000811767.630161.5607
ENSG00000177679homo_sapiensENSP0000048085141.80736.294anas_platyrhynchos_platyrhynchosENSAPLP0000002147660.801852.784
ENSG00000177679homo_sapiensENSP0000048085164.318556.049gallus_gallusENSGALP0001004429066.985658.3732
ENSG00000177679homo_sapiensENSP0000048085137.36632.4655meleagris_gallopavoENSMGAP0000000342961.616253.5354
ENSG00000177679homo_sapiensENSP0000048085165.084257.4273parus_majorENSPMJP0000002595066.929159.0551
ENSG00000177679homo_sapiensENSP0000048085157.12148.0858anolis_carolinensisENSACAP0000000043164.421454.2314
ENSG00000177679homo_sapiensENSP0000048085134.456428.9433geospiza_fortisENSGFOP0000000081848.283340.5579
ENSG00000177679homo_sapiensENSP0000048085158.499251.3017taeniopygia_guttataENSTGUP0000003090056.342249.41
ENSG00000177679homo_sapiensENSP0000048085154.211344.8698erpetoichthys_calabaricusENSECRP0000002691956.279846.5819
ENSG00000177679homo_sapiensENSP0000048085147.779539.0505kryptolebias_marmoratusENSKMAP0000001812248.447239.5963
ENSG00000177679homo_sapiensENSP0000048085164.318554.5176salvator_merianaeENSSMRP0000000399567.307757.0513
ENSG00000177679homo_sapiensENSP0000048085148.238939.0505oryzias_javanicusENSOJAP0000003967548.461539.2308
ENSG00000177679homo_sapiensENSP0000048085149.46440.4288dicentrarchus_labraxENSDLAP0000506907548.353339.521
ENSG00000177679homo_sapiensENSP0000048085161.408951.9142pelodiscus_sinensisENSPSIP0000000863562.951353.2182
ENSG00000177679homo_sapiensENSP0000048085159.571251.3017anser_brachyrhynchusENSABRP0000000169356.458648.6212
ENSG00000177679homo_sapiensENSP0000048085146.554437.0597cynoglossus_semilaevisENSCSEP0000001709842.998634.2291
ENSG00000177679homo_sapiensENSP0000048085146.554436.7534poecilia_formosaENSPFOP0000000896748.330738.1558
ENSG00000177679homo_sapiensENSP0000048085149.617240.7351sander_luciopercaENSSLUP0000001164050.077341.1128
ENSG00000177679homo_sapiensENSP0000048085165.237457.121strigops_habroptilaENSSHBP0000501486866.981158.6478
ENSG00000177679homo_sapiensENSP0000048085149.310941.0413pygocentrus_nattereriENSPNAP0000000322350.470242.0063
ENSG00000177679homo_sapiensENSP0000048085149.923441.0413seriola_lalandi_dorsalisENSSLDP0000002579149.244740.4834
ENSG00000177679homo_sapiensENSP0000048085149.157741.807oncorhynchus_tshawytschaENSOTSP0000504552449.157741.807
ENSG00000177679homo_sapiensENSP0000048085149.770340.1225acanthochromis_polyacanthusENSAPOP0000002629750.309640.5573
ENSG00000177679homo_sapiensENSP0000048085146.860637.9786nothobranchius_furzeriENSNFUP0001502580148.571439.3651
ENSG00000177679homo_sapiensENSP0000048085139.356832.4655denticeps_clupeoidesENSDCDP0000003685251.814542.7419
ENSG00000177679homo_sapiensENSP0000048085148.851539.8162takifugu_rubripesENSTRUP0000007772949.688540.4984
ENSG00000177679homo_sapiensENSP0000048085141.80735.8346ficedula_albicollisENSFALP0000002230962.903253.917
ENSG00000177679homo_sapiensENSP0000048085149.310940.4288cyprinus_carpio_carpioENSCCRP0000017121852.786943.2787
ENSG00000177679homo_sapiensENSP0000048085150.689140.7351cyprinus_carpio_carpioENSCCRP0000011955353.646743.1118
ENSG00000177679homo_sapiensENSP0000048085164.012356.049coturnix_japonicaENSCJPP0000501142466.987258.6538
ENSG00000177679homo_sapiensENSP0000048085150.076639.8162tetraodon_nigroviridisENSTNIP0000001138950.153439.8773
ENSG00000177679homo_sapiensENSP0000048085151.914243.4916paramormyrops_kingsleyaeENSPKIP0000004015352.234243.7596
ENSG00000177679homo_sapiensENSP0000048085147.779538.2848scleropages_formosusENSSFOP0001504768846.706637.4251
ENSG00000177679homo_sapiensENSP0000048085160.949551.9142leptobrachium_leishanenseENSLLEP0000003152663.884454.4141
ENSG00000177679homo_sapiensENSP0000048085148.39239.2037oryzias_melastigmaENSOMEP000000095595040.5063

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0003729enables mRNA binding1IBAHomo_sapiens(9606)Function
GO:0005634located_in nucleus1IEAHomo_sapiens(9606)Component

Expression