RBP Type	Canonical_RBPs
Diseases	N.A.
Drug	N.A.
Main interacting RNAs	N.A.
Moonlighting functions	N.A.
Localizations	Nucleoli
BulkPerturb-seq

Ensembl ID	ENSG00000176979	Gene ID	166655	Accession	21162
Symbol	TRIM60	Alias	RNF33;RNF129	Full Name	tripartite motif containing 60
Status	Confidence	Length	25292 bases	Strand	Plus strand
Position	4 : 165016458 - 165041749	RNA binding domain	SPRY
Summary	The protein encoded by this gene contains a RING finger domain, a motif present in a variety of functionally distinct proteins and known to be involved in protein-protein and protein-DNA interactions. Pseudogenes of this gene are located on more than six chromosomes including chromosome 4. Multiple alternatively spliced variants, encoding the same protein, have been identified. [provided by RefSeq, Jan 2013]

Protein	Domain	Pfam ID	E-value	Domain number
ENSP00000343765	SPRY	PF00622	1.4e-09	1
ENSP00000421142	SPRY	PF00622	1.4e-09	1
ENSP00000426496	SPRY	PF00622	1.4e-09	1
ENSP00000497401	SPRY	PF00622	1.4e-09	1

Pubmed ID	Full Name	Cell	Author	Time	Doi

Pubmed ID	Title	Author	Time	Journal

Name	Transcript ID	bp	Protein	Translation ID
TRIM60-205	ENST00000647760	2702	471aa	ENSP00000497401
TRIM60-204	ENST00000512596	1847	471aa	ENSP00000421142
TRIM60-202	ENST00000507119	389	90aa	ENSP00000421784
TRIM60-203	ENST00000508504	1674	471aa	ENSP00000426496
TRIM60-201	ENST00000341062	1867	471aa	ENSP00000343765

Pathway ID	Pathway Name	Source

ensgID	Trait	pValue	Pubmed ID

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Ensembl ID	Source				Target
	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id

Ensembl ID	Source				Target
	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id

Go ID	Go term	No. evidence	Entries	Species	Category
GO:0005515	enables protein binding	1	IPI	Homo_sapiens(9606)	Function
GO:0005737	is_active_in cytoplasm	2	IBA,IC	Homo_sapiens(9606)	Component
GO:0005829	is_active_in cytosol	1	IBA	Homo_sapiens(9606)	Component
GO:0008270	enables zinc ion binding	1	IEA	Homo_sapiens(9606)	Function
GO:0016567	involved_in protein ubiquitination	1	IBA	Homo_sapiens(9606)	Process
GO:0061630	enables ubiquitin protein ligase activity	1	IBA	Homo_sapiens(9606)	Function
GO:0140082	enables SUMO-ubiquitin ligase activity	1	IDA	Homo_sapiens(9606)	Function
GO:1901223	involved_in negative regulation of NIK/NF-kappaB signaling	1	IDA	Homo_sapiens(9606)	Process