Functions and Diseases

RBP Type Canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs mRNA
Moonlighting functions N.A.
Localizations N.A.
BulkPerturb-seq N.A.

Description

Ensembl ID ENSG00000175718 Gene ID 139804 Accession 26859
Symbol RBMXL3 Alias CXorf55 Full Name RBMX like 3
Status Confidence Length 3459 bases Strand Plus strand
Position X : 115189410 - 115192868 RNA binding domain RRM_1
Summary Predicted to enable mRNA binding activity and snRNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be part of U12-type spliceosomal complex. [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000417451 RRM_1 PF00076 9.8e-20 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal
33719563 A primate-specific RNA-binding protein (RBMXL3) is involved in glucocorticoid regulation of human pulmonary surfactant protein B (SP-B) mRNA stability. Lidan Liu 2021-05-01 American journal of physiology. Lung cellular and molecular physiology

Transcripts

Name Transcript ID bp Protein Translation ID
RBMXL3-201 ENST00000424776 3459 1067aa ENSP00000417451

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000175718homo_sapiensENSP0000030413972.959265.5612homo_sapiensENSP0000041745126.804124.0862
ENSG00000175718homo_sapiensENSP0000029597111.9737.4199homo_sapiensENSP000004174516.654174.12371
ENSG00000175718homo_sapiensENSP0000047869134.310922.8739homo_sapiensENSP0000041745110.96537.31022
ENSG00000175718homo_sapiensENSP0000044536616.43069.63173homo_sapiensENSP000004174515.43583.1865
ENSG00000175718homo_sapiensENSP0000034182632.526920.4301homo_sapiensENSP0000041745111.34027.12277
ENSG00000175718homo_sapiensENSP0000035009036.87524.0625homo_sapiensENSP0000041745111.0597.2165
ENSG00000175718homo_sapiensENSP0000049380536.87523.125homo_sapiensENSP0000041745111.0596.93533
ENSG00000175718homo_sapiensENSP0000037630931.74622.4868homo_sapiensENSP0000041745111.24657.96626
ENSG00000175718homo_sapiensENSP0000028407327.743918.2927homo_sapiensENSP000004174518.528585.62324
ENSG00000175718homo_sapiensENSP0000031047119.498612.2563homo_sapiensENSP000004174516.560454.12371
ENSG00000175718homo_sapiensENSP0000030916619.230812.3626homo_sapiensENSP000004174516.560454.21743
ENSG00000175718homo_sapiensENSP0000049824862.307752.8205homo_sapiensENSP0000041745122.774119.3065
ENSG00000175718homo_sapiensENSP0000035964564.450155.4987homo_sapiensENSP0000041745123.617620.3374
ENSG00000175718homo_sapiensENSP0000040137120.725412.6943homo_sapiensENSP000004174517.497664.59231
ENSG00000175718homo_sapiensENSP0000025755225.414416.2983homo_sapiensENSP000004174518.622315.52952
ENSG00000175718homo_sapiensENSP0000028172213.32087.12946homo_sapiensENSP000004174516.654173.56139
ENSG00000175718homo_sapiensENSP0000035295611.16176.60592homo_sapiensENSP000004174514.592312.7179
ENSG00000175718homo_sapiensENSP0000036293618.118510.8014homo_sapiensENSP000004174514.873482.90534
ENSG00000175718homo_sapiensENSP0000031319922.253515.493homo_sapiensENSP000004174517.403945.15464
ENSG00000175718homo_sapiensENSP0000025336311.13217.16981homo_sapiensENSP000004174515.529523.56139
ENSG00000175718homo_sapiensENSP0000036310913.13997.33788homo_sapiensENSP000004174517.21654.02999
ENSG00000175718homo_sapiensENSP0000031604228.196719.3443homo_sapiensENSP000004174518.059985.52952
ENSG00000175718homo_sapiensENSP0000031819511.97187.46479homo_sapiensENSP000004174517.966264.9672
ENSG00000175718homo_sapiensENSP0000039490220.266711.7333homo_sapiensENSP000004174517.122774.12371
ENSG00000175718homo_sapiensENSP0000035110824.698817.1687homo_sapiensENSP000004174517.68515.34208
ENSG00000175718homo_sapiensENSP000002617419.166675.20833homo_sapiensENSP000004174518.247424.68604
ENSG00000175718homo_sapiensENSP0000023307830.221120.6388homo_sapiensENSP0000041745111.52767.87254
ENSG00000175718homo_sapiensENSP0000037212740.524231.0484homo_sapiensENSP0000041745118.837914.433
ENSG00000175718homo_sapiensENSP0000037210540.524231.0484homo_sapiensENSP0000041745118.837914.433
ENSG00000175718homo_sapiensENSP0000037248440.725831.25homo_sapiensENSP0000041745118.931614.5267
ENSG00000175718homo_sapiensENSP0000037215440.322630.8468homo_sapiensENSP0000041745118.744114.3393
ENSG00000175718homo_sapiensENSP0000025083140.322630.8468homo_sapiensENSP0000041745118.744114.3393
ENSG00000175718homo_sapiensENSP0000030715540.322630.8468homo_sapiensENSP0000041745118.744114.3393
ENSG00000175718homo_sapiensENSP0000029547018.809513.0952homo_sapiensENSP000004174517.403945.15464
ENSG00000175718homo_sapiensENSP0000046602532.323224.5791homo_sapiensENSP000004174518.997196.84161
ENSG00000175718homo_sapiensENSP0000036595056.687943.3121homo_sapiensENSP000004174518.341146.37301

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000175718homo_sapiensENSP0000041745167.666463.074nomascus_leucogenysENSNLEP0000003297080.222274.7778
ENSG00000175718homo_sapiensENSP0000041745172.539870.9466pan_paniscusENSPPAP0000001499095.673793.5723
ENSG00000175718homo_sapiensENSP0000041745195.407793.1584pan_troglodytesENSPTRP0000004730195.318493.0712
ENSG00000175718homo_sapiensENSP0000041745194.189392.2212gorilla_gorillaENSGGOP0000002284594.72292.7427
ENSG00000175718homo_sapiensENSP0000041745120.80619.119dasypus_novemcinctusENSDNOP0000002411071.612965.8064
ENSG00000175718homo_sapiensENSP0000041745120.712318.5567echinops_telfairiENSETEP0000000456956.958851.0309
ENSG00000175718homo_sapiensENSP0000041745148.547344.4236macaca_nemestrinaENSMNEP0000000574868.609362.7815
ENSG00000175718homo_sapiensENSP0000041745149.109745.1734papio_anubisENSPANP0000001502674.964268.9557
ENSG00000175718homo_sapiensENSP0000041745120.056217.6195tursiops_truncatusENSTTRP0000000303655.874749.0862
ENSG00000175718homo_sapiensENSP000004174516.466735.9044vulpes_vulpesENSVVUP0000003921878.409171.5909
ENSG00000175718homo_sapiensENSP0000041745124.554821.7432mus_spretusMGP_SPRETEiJ_P008479368.051960.2597
ENSG00000175718homo_sapiensENSP0000041745123.898821.3683equus_asinusENSEASP0000503814964.231757.4307
ENSG00000175718homo_sapiensENSP0000041745125.679522.8679capra_hircusENSCHIP0000000227369.367161.7722
ENSG00000175718homo_sapiensENSP0000041745122.774119.9625loxodonta_africanaENSLAFP0000002625369.428660.8571
ENSG00000175718homo_sapiensENSP0000041745125.210921.9306panthera_leoENSPLOP0000000832468.274159.3909
ENSG00000175718homo_sapiensENSP0000041745125.585822.7741bos_indicus_hybridENSBIXP0000503758368.939461.3636
ENSG00000175718homo_sapiensENSP000004174518.341147.59138oryctolagus_cuniculusENSOCUP0000004175660.544255.102
ENSG00000175718homo_sapiensENSP0000041745123.14920.0562equus_caballusENSECAP0000006356455.756248.307
ENSG00000175718homo_sapiensENSP0000041745125.023421.8369panthera_pardusENSPPRP0000002899467.766559.1371
ENSG00000175718homo_sapiensENSP0000041745123.805120.9934balaenoptera_musculusENSBMSP0001003034265.97458.1818
ENSG00000175718homo_sapiensENSP0000041745125.210921.8369felis_catusENSFCAP0000004822768.274159.1371
ENSG00000175718homo_sapiensENSP000004174516.091855.52952ursus_americanusENSUAMP0000000128190.277881.9444
ENSG00000175718homo_sapiensENSP000004174516.185575.15464bison_bison_bisonENSBBBP0000002776786.842172.3684
ENSG00000175718homo_sapiensENSP0000041745123.523920.5248monodon_monocerosENSMMNP0001502926065.535257.1802
ENSG00000175718homo_sapiensENSP0000041745110.02818.52858sus_scrofaENSSSCP0000007688762.573153.2164
ENSG00000175718homo_sapiensENSP0000041745119.025316.6823octodon_degusENSODEP0000000129965.273357.2347
ENSG00000175718homo_sapiensENSP0000041745125.679522.8679ovis_aries_rambouilletENSOARP0002001075069.367161.7722
ENSG00000175718homo_sapiensENSP000004174516.560455.4358ursus_maritimusENSUMAP0000002648887.572.5
ENSG00000175718homo_sapiensENSP0000041745123.617620.6186delphinapterus_leucasENSDLEP0000001142665.796357.4413
ENSG00000175718homo_sapiensENSP0000041745123.14920.0562physeter_catodonENSPCTP0000500701565.517256.7639
ENSG00000175718homo_sapiensENSP0000041745124.554821.7432mus_caroliMGP_CAROLIEiJ_P008141068.051960.2597
ENSG00000175718homo_sapiensENSP0000041745124.554821.7432mus_musculusENSMUSP0000009573968.051960.2597
ENSG00000175718homo_sapiensENSP000004174515.998135.52952dipodomys_ordiiENSDORP0000002433574.418668.6047
ENSG00000175718homo_sapiensENSP0000041745118.556716.12mustela_putorius_furoENSMPUP0000001035471.739162.3188
ENSG00000175718homo_sapiensENSP0000041745120.056217.7132mesocricetus_auratusENSMAUP0000002451968.370660.3834
ENSG00000175718homo_sapiensENSP000004174517.310226.09185panthera_tigris_altaicaENSPTIP0000002076671.559659.633
ENSG00000175718homo_sapiensENSP0000041745124.648521.6495rattus_norvegicusENSRNOP0000008834068.134759.8446
ENSG00000175718homo_sapiensENSP000004174517.029055.52952prolemur_simusENSPSMP0000001435065.217451.3043
ENSG00000175718homo_sapiensENSP000004174517.310226.09185microtus_ochrogasterENSMOCP0000001091675.728263.1068
ENSG00000175718homo_sapiensENSP0000041745116.026213.8707sorex_araneusENSSARP0000001095744.881938.8451
ENSG00000175718homo_sapiensENSP000004174516.935335.9044peromyscus_maniculatus_bairdiiENSPEMP0000001139174.747563.6364
ENSG00000175718homo_sapiensENSP000004174516.654175.81068bos_mutusENSBMUP0000001247188.7577.5
ENSG00000175718homo_sapiensENSP0000041745124.554821.7432mus_spicilegusENSMSIP0000001706768.051960.2597
ENSG00000175718homo_sapiensENSP0000041745124.648521.9306cricetulus_griseus_chok1gshdENSCGRP0000100580068.134760.6218
ENSG00000175718homo_sapiensENSP0000041745124.461121.6495rhinolophus_ferrumequinumENSRFEP0001000615266.412258.7786
ENSG00000175718homo_sapiensENSP0000041745114.245511.7151neovison_visonENSNVIP0000001687659.14448.6381
ENSG00000175718homo_sapiensENSP0000041745125.679522.8679bos_taurusENSBTAP0000005609669.191961.6162
ENSG00000175718homo_sapiensENSP0000041745121.743219.119heterocephalus_glaber_femaleENSHGLP0000004885462.702755.1351
ENSG00000175718homo_sapiensENSP0000041745124.742322.1181canis_lupus_dingoENSCAFP0002001227467.519260.3581
ENSG00000175718homo_sapiensENSP0000041745124.929722.6804sciurus_vulgarisENSSVLP0000500680169.090962.8571
ENSG00000175718homo_sapiensENSP0000041745125.023422.0244bos_grunniensENSBGRP0000000861063.270155.6872
ENSG00000175718homo_sapiensENSP0000041745117.057214.8079chinchilla_lanigeraENSCLAP0000002457566.911858.0882
ENSG00000175718homo_sapiensENSP000004174516.279295.24836cervus_hanglu_yarkandensisENSCHYP0000003098779.761966.6667
ENSG00000175718homo_sapiensENSP000004174517.403945.9044cervus_hanglu_yarkandensisENSCHYP000000160557963
ENSG00000175718homo_sapiensENSP000004174516.185574.9672catagonus_wagneriENSCWAP0000000741074.157359.5506
ENSG00000175718homo_sapiensENSP0000041745126.054423.5239otolemur_garnettiiENSOGAP0000002225370.737963.8677
ENSG00000175718homo_sapiensENSP0000041745125.023422.5867cebus_imitatorENSCCAP0000002611263.270157.109
ENSG00000175718homo_sapiensENSP000004174515.060923.93627urocitellus_parryiiENSUPAP0001000140972.97356.7568
ENSG00000175718homo_sapiensENSP0000041745125.398322.7741moschus_moschiferusENSMMSP0000002464068.956761.8321
ENSG00000175718homo_sapiensENSP0000041745146.29842.5492rhinopithecus_roxellanaENSRROP0000002341073.511967.5595
ENSG00000175718homo_sapiensENSP0000041745124.461121.6495mus_pahariMGP_PahariEiJ_P001822567.792260

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000398involved_in mRNA splicing, via spliceosome1IBAHomo_sapiens(9606)Process
GO:0003729enables mRNA binding1IBAHomo_sapiens(9606)Function
GO:0005689part_of U12-type spliceosomal complex1IBAHomo_sapiens(9606)Component
GO:0017069enables snRNA binding1IBAHomo_sapiens(9606)Function

Expression