Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions Metabolic enzyme
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000173598 Gene ID 11163 Accession 8051
Symbol NUDT4 Alias DIPP2;NUDT4B;DIPP-2B;HDCMB47P;DIPP2beta;DIPP2alpha Full Name nudix hydrolase 4
Status Confidence Length 30264 bases Strand Plus strand
Position 12 : 93377883 - 93408146 RNA binding domain N.A.
Summary The protein encoded by this gene regulates the turnover of diphosphoinositol polyphosphates. The turnover of these high-energy diphosphoinositol polyphosphates represents a molecular switching activity with important regulatory consequences. Molecular switching by diphosphoinositol polyphosphates may contribute to regulating intracellular trafficking. Several alternatively spliced transcript variants have been described, but the full-length nature of some variants has not been determined. Isoforms DIPP2alpha and DIPP2beta are distinguishable from each other solely by DIPP2beta possessing one additional amino acid due to intron boundary skidding in alternate splicing. [provided by RefSeq, Jul 2008]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
NUDT4-201 ENST00000337179 9753 181aa ENSP00000338352
NUDT4-202 ENST00000415493 9708 180aa ENSP00000406612
NUDT4-207 ENST00000550056 531 95aa ENSP00000448504
NUDT4-206 ENST00000549992 3607 128aa ENSP00000449552
NUDT4-205 ENST00000548662 765 128aa ENSP00000449724
NUDT4-204 ENST00000547014 1419 129aa ENSP00000448032
NUDT4-203 ENST00000546925 569 112aa ENSP00000448620

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
54593Cryptoxanthins2.3660000E-005-

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000298enables endopolyphosphatase activity1IBAHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005634is_active_in nucleus1IBAHomo_sapiens(9606)Component
GO:0005737is_active_in cytoplasm1IBAHomo_sapiens(9606)Component
GO:0005829located_in cytosol2IDA,TASHomo_sapiens(9606)Component
GO:0008486enables diphosphoinositol-polyphosphate diphosphatase activity2IBA,IDAHomo_sapiens(9606)Function
GO:0019722involved_in calcium-mediated signaling1TASHomo_sapiens(9606)Process
GO:0019935involved_in cyclic-nucleotide-mediated signaling1TASHomo_sapiens(9606)Process
GO:0030515enables snoRNA binding1ISSHomo_sapiens(9606)Function
GO:0034431enables bis(5-adenosyl)-hexaphosphatase activity1IBAHomo_sapiens(9606)Function
GO:0034432enables bis(5-adenosyl)-pentaphosphatase activity1IBAHomo_sapiens(9606)Function
GO:0035556involved_in intracellular signal transduction1NASHomo_sapiens(9606)Process
GO:0046872enables metal ion binding1IEAHomo_sapiens(9606)Function
GO:0052845enables inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity1IEAHomo_sapiens(9606)Function
GO:0052848enables inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity1IEAHomo_sapiens(9606)Function
GO:0071543involved_in diphosphoinositol polyphosphate metabolic process1IBAHomo_sapiens(9606)Process
GO:0140933NOT enables 5-(N(7)-methylguanosine 5-triphospho)-[mRNA] hydrolase activity1ISSHomo_sapiens(9606)Function
GO:1901907involved_in diadenosine pentaphosphate catabolic process1IBAHomo_sapiens(9606)Process
GO:1901909involved_in diadenosine hexaphosphate catabolic process1IBAHomo_sapiens(9606)Process
GO:1901911involved_in adenosine 5-(hexahydrogen pentaphosphate) catabolic process1IBAHomo_sapiens(9606)Process

Expression