Functions and Diseases

RBP Type Canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs mRNA
Moonlighting functions N.A.
Localizations N.A.
BulkPerturb-seq N.A.

Description

Ensembl ID ENSG00000170935 Gene ID 392517 Accession 31795
Symbol NCBP2L Alias dJ820B18.1 Full Name nuclear cap binding protein subunit 2 like
Status Confidence Length 20931 bases Strand Plus strand
Position X : 107774899 - 107795829 RNA binding domain RRM_1
Summary Predicted to enable RNA cap binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be part of nuclear cap binding activity complex. [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000476955 RRM_1 PF00076 2.3e-07 1
ENSP00000492033 RRM_1 PF00076 2.3e-07 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
NCBP2L-202 ENST00000639756 1953 153aa ENSP00000492033
NCBP2L-201 ENST00000509000 1807 153aa ENSP00000476955

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000170935homo_sapiensENSP0000032680680.128265.3846homo_sapiensENSP0000047695581.699366.6667

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000170935homo_sapiensENSP0000047695596.73296.0784pongo_abeliiENSPPYP0000002307596.73296.0784
ENSG00000170935homo_sapiensENSP0000047695598.039298.0392gorilla_gorillaENSGGOP0000001421598.039298.0392
ENSG00000170935homo_sapiensENSP0000047695578.431464.7059ornithorhynchus_anatinusENSOANP0000004613629.776724.5658
ENSG00000170935homo_sapiensENSP0000047695579.08564.0523sarcophilus_harrisiiENSSHAP0000004165478.064563.2258
ENSG00000170935homo_sapiensENSP0000047695579.08564.0523notamacropus_eugeniiENSMEUP0000000431077.564162.8205
ENSG00000170935homo_sapiensENSP0000047695579.738666.0131notamacropus_eugeniiENSMEUP0000000741478.205164.7436
ENSG00000170935homo_sapiensENSP0000047695578.431466.0131dasypus_novemcinctusENSDNOP0000002185079.470266.8874
ENSG00000170935homo_sapiensENSP0000047695563.398750.9804erinaceus_europaeusENSEEUP0000000416463.815851.3158
ENSG00000170935homo_sapiensENSP0000047695596.078494.1176macaca_fascicularisENSMFAP0000006022796.078494.1176
ENSG00000170935homo_sapiensENSP0000047695596.078494.1176macaca_mulattaENSMMUP0000007574896.078494.1176
ENSG00000170935homo_sapiensENSP0000047695594.771292.8105papio_anubisENSPANP0000005573894.771292.8105
ENSG00000170935homo_sapiensENSP0000047695561.437952.2876vulpes_vulpesENSVVUP0000001331266.666756.7376
ENSG00000170935homo_sapiensENSP0000047695575.81762.7451equus_asinusENSEASP0000504324953.703744.4444
ENSG00000170935homo_sapiensENSP0000047695575.81761.4379capra_hircusENSCHIP0000002185473.885459.8726
ENSG00000170935homo_sapiensENSP0000047695586.274575.817loxodonta_africanaENSLAFP0000002068683.544373.4177
ENSG00000170935homo_sapiensENSP0000047695573.202658.1699ailuropoda_melanoleucaENSAMEP000000197066450.8571
ENSG00000170935homo_sapiensENSP0000047695576.470662.7451equus_caballusENSECAP0000008796551.315842.1053
ENSG00000170935homo_sapiensENSP0000047695577.124264.7059canis_lupus_familiarisENSCAFP0084502555577.631665.1316
ENSG00000170935homo_sapiensENSP0000047695579.738667.9739panthera_pardusENSPPRP0000001970979.738667.9739
ENSG00000170935homo_sapiensENSP0000047695541.830135.2941balaenoptera_musculusENSBMSP0001002418659.259350
ENSG00000170935homo_sapiensENSP0000047695550.326837.9085felis_catusENSFCAP0000005890556.204442.3358
ENSG00000170935homo_sapiensENSP0000047695575.163462.0915ursus_americanusENSUAMP0000000811070.987758.642
ENSG00000170935homo_sapiensENSP0000047695575.81764.0523monodelphis_domesticaENSMODP0000003485774.838763.2258
ENSG00000170935homo_sapiensENSP0000047695579.738666.0131monodelphis_domesticaENSMODP0000002924378.205164.7436
ENSG00000170935homo_sapiensENSP0000047695580.392266.6667monodelphis_domesticaENSMODP0000003485878.846265.3846
ENSG00000170935homo_sapiensENSP0000047695578.431463.3987monodelphis_domesticaENSMODP0000001984976.923162.1795
ENSG00000170935homo_sapiensENSP0000047695568.627457.5163bison_bison_bisonENSBBBP0000000888667.741956.7742
ENSG00000170935homo_sapiensENSP0000047695571.895456.8627monodon_monocerosENSMMNP0001502348863.583850.289
ENSG00000170935homo_sapiensENSP0000047695574.509865.3595sus_scrofaENSSSCP000000133587565.7895
ENSG00000170935homo_sapiensENSP0000047695575.163462.0915ursus_maritimusENSUMAP0000001442670.987758.642
ENSG00000170935homo_sapiensENSP0000047695566.666752.9412delphinapterus_leucasENSDLEP0000001246462.96350
ENSG00000170935homo_sapiensENSP0000047695579.738667.9739mustela_putorius_furoENSMPUP0000001832778.205166.6667
ENSG00000170935homo_sapiensENSP0000047695595.424893.4641chlorocebus_sabaeusENSCSAP0000001768795.424893.4641
ENSG00000170935homo_sapiensENSP0000047695571.895459.4771phocoena_sinusENSPSNP0000002541665.476254.1667
ENSG00000170935homo_sapiensENSP0000047695579.738667.9739panthera_tigris_altaicaENSPTIP0000000302179.738667.9739
ENSG00000170935homo_sapiensENSP0000047695568.627455.5556prolemur_simusENSPSMP0000003231066.037753.4591
ENSG00000170935homo_sapiensENSP0000047695577.124263.3987sorex_araneusENSSARP0000001292975.64162.1795
ENSG00000170935homo_sapiensENSP0000047695582.352968.6274bos_mutusENSBMUP0000003260574.556262.1302
ENSG00000170935homo_sapiensENSP0000047695554.90249.0196myotis_lucifugusENSMLUP0000001981374.336366.3717
ENSG00000170935homo_sapiensENSP0000047695579.738666.0131vombatus_ursinusENSVURP0001002472878.205164.7436
ENSG00000170935homo_sapiensENSP0000047695579.738666.0131vombatus_ursinusENSVURP0001002336678.205164.7436
ENSG00000170935homo_sapiensENSP0000047695580.392264.7059vombatus_ursinusENSVURP0001002289678.343963.0573
ENSG00000170935homo_sapiensENSP0000047695577.124266.6667neovison_visonENSNVIP0000002513673.7563.75
ENSG00000170935homo_sapiensENSP0000047695549.019640.5229bos_taurusENSBTAP0000006206571.428659.0476
ENSG00000170935homo_sapiensENSP0000047695579.738667.9739canis_lupus_dingoENSCAFP0002000826276.729665.4088
ENSG00000170935homo_sapiensENSP0000047695558.823549.0196phascolarctos_cinereusENSPCIP0000004666674.380261.9835
ENSG00000170935homo_sapiensENSP0000047695579.08564.0523phascolarctos_cinereusENSPCIP0000000609878.064563.2258
ENSG00000170935homo_sapiensENSP0000047695579.08565.3595bos_grunniensENSBGRP0000003267974.233161.3497
ENSG00000170935homo_sapiensENSP0000047695577.777864.0523cervus_hanglu_yarkandensisENSCHYP0000001477076.282162.8205
ENSG00000170935homo_sapiensENSP0000047695578.431468.6274catagonus_wagneriENSCWAP0000001454978.947469.0789
ENSG00000170935homo_sapiensENSP0000047695571.895456.8627urocitellus_parryiiENSUPAP0001001643968.7554.375
ENSG00000170935homo_sapiensENSP0000047695569.28150.3268caenorhabditis_elegansF26A3.2a.267.088648.7342
ENSG00000170935homo_sapiensENSP0000047695573.202658.8235drosophila_melanogasterFBpp008297372.727358.4416
ENSG00000170935homo_sapiensENSP0000047695578.431461.4379ciona_intestinalisENSCINP0000003596864.864950.8108
ENSG00000170935homo_sapiensENSP0000047695577.124259.4771petromyzon_marinusENSPMAP0000000819970.238154.1667
ENSG00000170935homo_sapiensENSP0000047695568.627454.902eptatretus_burgeriENSEBUP0000000241948.387138.7097
ENSG00000170935homo_sapiensENSP0000047695578.431463.3987callorhinchus_miliiENSCMIP0000001957873.170759.1463
ENSG00000170935homo_sapiensENSP0000047695581.045864.0523latimeria_chalumnaeENSLACP0000001987475.609859.7561
ENSG00000170935homo_sapiensENSP0000047695579.738661.4379lepisosteus_oculatusENSLOCP0000000173372.61955.9524
ENSG00000170935homo_sapiensENSP0000047695579.738662.0915clupea_harengusENSCHAP0000006070674.390257.9268
ENSG00000170935homo_sapiensENSP0000047695580.392263.3987danio_rerioENSDARP0000002068879.354862.5806
ENSG00000170935homo_sapiensENSP0000047695573.856258.1699carassius_auratusENSCARP0000005418951.598240.6393
ENSG00000170935homo_sapiensENSP0000047695574.509854.2484carassius_auratusENSCARP0000000948148.305135.1695
ENSG00000170935homo_sapiensENSP0000047695581.045862.0915astyanax_mexicanusENSAMXP0000003904173.809556.5476
ENSG00000170935homo_sapiensENSP0000047695581.045862.7451esox_luciusENSELUP0000005531076.543259.2593
ENSG00000170935homo_sapiensENSP0000047695579.08562.7451electrophorus_electricusENSEEEP0000005081273.333358.1818
ENSG00000170935homo_sapiensENSP0000047695580.392261.4379oncorhynchus_kisutchENSOKIP0000509066579.354860.6452
ENSG00000170935homo_sapiensENSP0000047695581.699362.0915oncorhynchus_mykissENSOMYP0000002317074.850356.8862
ENSG00000170935homo_sapiensENSP0000047695581.045862.0915salmo_salarENSSSAP0000017730575.609857.9268
ENSG00000170935homo_sapiensENSP0000047695580.392261.4379salmo_truttaENSSTUP0000006063379.354860.6452
ENSG00000170935homo_sapiensENSP0000047695579.08562.0915gadus_morhuaENSGMOP0000002004674.233158.2822
ENSG00000170935homo_sapiensENSP0000047695579.08563.3987fundulus_heteroclitusENSFHEP0000000155373.780559.1463
ENSG00000170935homo_sapiensENSP0000047695579.738664.0523poecilia_reticulataENSPREP0000003195262.886650.5155
ENSG00000170935homo_sapiensENSP0000047695579.08564.0523xiphophorus_maculatusENSXMAP0000001011973.780559.7561
ENSG00000170935homo_sapiensENSP0000047695579.738662.7451oryzias_latipesENSORLP0000001408774.390258.5366
ENSG00000170935homo_sapiensENSP0000047695578.431460.1307cyclopterus_lumpusENSCLMP0000503063765.217450
ENSG00000170935homo_sapiensENSP0000047695581.045863.3987oreochromis_niloticusENSONIP0000007107675.609859.1463
ENSG00000170935homo_sapiensENSP0000047695545.09832.0261oreochromis_niloticusENSONIP0000007531457.540.8333
ENSG00000170935homo_sapiensENSP0000047695545.751632.0261oreochromis_niloticusENSONIP0000003168058.333340.8333
ENSG00000170935homo_sapiensENSP0000047695537.908525.4902oreochromis_niloticusENSONIP0000004681063.736342.8571
ENSG00000170935homo_sapiensENSP0000047695580.392262.7451haplochromis_burtoniENSHBUP0000002327664.397950.2618
ENSG00000170935homo_sapiensENSP0000047695579.738662.7451astatotilapia_callipteraENSACLP0000003970974.390258.5366
ENSG00000170935homo_sapiensENSP0000047695578.431462.0915sparus_aurataENSSAUP0001006548873.170757.9268
ENSG00000170935homo_sapiensENSP0000047695580.392264.0523lates_calcariferENSLCAP000100267297559.7561
ENSG00000170935homo_sapiensENSP0000047695577.777865.3595xenopus_tropicalisENSXETP0000004199777.777865.3595
ENSG00000170935homo_sapiensENSP0000047695579.738662.7451chrysemys_picta_belliiENSCPBP0000000592477.70761.1465
ENSG00000170935homo_sapiensENSP0000047695575.81758.8235sphenodon_punctatusENSSPUP0000002154574.838758.0645
ENSG00000170935homo_sapiensENSP0000047695576.470662.7451crocodylus_porosusENSCPRP0000500499969.642957.1429
ENSG00000170935homo_sapiensENSP0000047695577.124260.7843laticauda_laticaudataENSLLTP0000002004772.392657.0552
ENSG00000170935homo_sapiensENSP0000047695577.777860.7843notechis_scutatusENSNSUP0000001656673.006157.0552
ENSG00000170935homo_sapiensENSP0000047695545.751637.2549pseudonaja_textilisENSPTXP0000001452987.571.25
ENSG00000170935homo_sapiensENSP0000047695579.738662.0915anas_platyrhynchos_platyrhynchosENSAPLP0000001434674.390257.9268
ENSG00000170935homo_sapiensENSP0000047695579.08562.7451gallus_gallusENSGALP0001002420267.222253.3333
ENSG00000170935homo_sapiensENSP0000047695579.08562.7451meleagris_gallopavoENSMGAP0000003413777.070161.1465
ENSG00000170935homo_sapiensENSP0000047695578.431462.7451serinus_canariaENSSCAP0000002156176.433161.1465
ENSG00000170935homo_sapiensENSP0000047695578.431462.7451parus_majorENSPMJP0000002541027.272721.8182
ENSG00000170935homo_sapiensENSP0000047695570.588256.8627anolis_carolinensisENSACAP0000001484763.529451.1765
ENSG00000170935homo_sapiensENSP0000047695577.777860.7843naja_najaENSNNAP0000001514373.006157.0552
ENSG00000170935homo_sapiensENSP0000047695575.81763.3987podarcis_muralisENSPMRP0000003638869.047657.7381
ENSG00000170935homo_sapiensENSP0000047695575.81762.7451podarcis_muralisENSPMRP0000002747669.047657.1429
ENSG00000170935homo_sapiensENSP0000047695578.431462.7451geospiza_fortisENSGFOP0000002183376.433161.1465
ENSG00000170935homo_sapiensENSP0000047695578.431462.7451taeniopygia_guttataENSTGUP0000000912676.433161.1465
ENSG00000170935homo_sapiensENSP0000047695580.392262.0915erpetoichthys_calabaricusENSECRP000000118657557.9268
ENSG00000170935homo_sapiensENSP0000047695579.08562.7451kryptolebias_marmoratusENSKMAP0000001291573.780558.5366
ENSG00000170935homo_sapiensENSP0000047695576.470663.3987salvator_merianaeENSSMRP0000000479969.642957.7381
ENSG00000170935homo_sapiensENSP0000047695579.08563.3987oryzias_javanicusENSOJAP0000003574273.780559.1463
ENSG00000170935homo_sapiensENSP0000047695580.392264.0523amphilophus_citrinellusENSACIP000000128287559.7561
ENSG00000170935homo_sapiensENSP0000047695580.392262.7451dicentrarchus_labraxENSDLAP000050675057558.5366
ENSG00000170935homo_sapiensENSP0000047695581.045863.3987amphiprion_perculaENSAPEP0000001876567.391352.7174
ENSG00000170935homo_sapiensENSP0000047695579.738662.7451oryzias_sinensisENSOSIP0000004523674.390258.5366
ENSG00000170935homo_sapiensENSP0000047695572.54956.8627pelodiscus_sinensisENSPSIP0000001050384.090965.9091
ENSG00000170935homo_sapiensENSP0000047695572.54957.5163gopherus_evgoodeiENSGEVP0000500708951.869241.1215
ENSG00000170935homo_sapiensENSP0000047695579.738662.7451chelonoidis_abingdoniiENSCABP0000001603377.70761.1465
ENSG00000170935homo_sapiensENSP0000047695579.738662.7451seriola_dumeriliENSSDUP0000002121974.390258.5366
ENSG00000170935homo_sapiensENSP0000047695575.81758.1699cottoperca_gobioENSCGOP0000002464477.852359.7315
ENSG00000170935homo_sapiensENSP0000047695547.712438.5621struthio_camelus_australisENSSCUP0000002034784.883768.6047
ENSG00000170935homo_sapiensENSP0000047695576.470664.7059anser_brachyrhynchusENSABRP0000002278669.642958.9286
ENSG00000170935homo_sapiensENSP0000047695578.431460.7843gasterosteus_aculeatusENSGACP0000000826372.727356.3636
ENSG00000170935homo_sapiensENSP0000047695579.08562.7451cynoglossus_semilaevisENSCSEP0000003016164.021250.7937
ENSG00000170935homo_sapiensENSP0000047695579.738663.3987poecilia_formosaENSPFOP0000001451673.053958.0838
ENSG00000170935homo_sapiensENSP0000047695581.045864.0523myripristis_murdjanENSMMDP0000500553775.609859.7561
ENSG00000170935homo_sapiensENSP0000047695578.431460.7843sander_luciopercaENSSLUP0000002742073.170756.7073
ENSG00000170935homo_sapiensENSP0000047695579.08561.4379strigops_habroptilaENSSHBP0000501885277.070159.8726
ENSG00000170935homo_sapiensENSP0000047695575.81758.1699amphiprion_ocellarisENSAOCP0000002816263.043548.3696
ENSG00000170935homo_sapiensENSP0000047695571.895456.2092terrapene_carolina_triunguisENSTMTP0000002718284.615466.1538
ENSG00000170935homo_sapiensENSP0000047695571.895456.8627hucho_huchoENSHHUP0000008778765.868352.0958
ENSG00000170935homo_sapiensENSP0000047695578.431464.0523betta_splendensENSBSLP0000002471173.170759.7561
ENSG00000170935homo_sapiensENSP0000047695580.392262.0915pygocentrus_nattereriENSPNAP000000166277557.9268
ENSG00000170935homo_sapiensENSP0000047695579.738662.7451anabas_testudineusENSATEP0000004231774.390258.5366
ENSG00000170935homo_sapiensENSP0000047695578.431460.1307ciona_savignyiENSCSAVP0000000990664.864949.7297
ENSG00000170935homo_sapiensENSP0000047695563.398746.4052saccharomyces_cerevisiaeYPL178W46.634634.1346
ENSG00000170935homo_sapiensENSP0000047695579.738662.0915seriola_lalandi_dorsalisENSSLDP0000002624961.306547.7387
ENSG00000170935homo_sapiensENSP0000047695578.431461.4379labrus_bergyltaENSLBEP0000002689373.170757.3171
ENSG00000170935homo_sapiensENSP0000047695581.045862.7451pundamilia_nyerereiENSPNYP0000002065875.609858.5366
ENSG00000170935homo_sapiensENSP0000047695580.392264.7059mastacembelus_armatusENSMAMP000000166957560.3659
ENSG00000170935homo_sapiensENSP0000047695573.202658.1699stegastes_partitusENSSPAP000000286946450.8571
ENSG00000170935homo_sapiensENSP0000047695580.392261.4379oncorhynchus_tshawytschaENSOTSP0000506005279.354860.6452
ENSG00000170935homo_sapiensENSP0000047695572.54958.8235acanthochromis_polyacanthusENSAPOP0000002993649.333340
ENSG00000170935homo_sapiensENSP0000047695578.431462.0915aquila_chrysaetos_chrysaetosENSACCP0002000567576.433160.5096
ENSG00000170935homo_sapiensENSP0000047695578.431463.3987nothobranchius_furzeriENSNFUP0001505146873.170759.1463
ENSG00000170935homo_sapiensENSP0000047695579.738664.0523cyprinodon_variegatusENSCVAP0000001061274.390259.7561
ENSG00000170935homo_sapiensENSP0000047695579.738663.3987denticeps_clupeoidesENSDCDP0000003819374.390259.1463
ENSG00000170935homo_sapiensENSP0000047695576.470659.4771larimichthys_croceaENSLCRP0000500554868.823553.5294
ENSG00000170935homo_sapiensENSP0000047695571.241858.1699takifugu_rubripesENSTRUP0000007596163.005851.4451
ENSG00000170935homo_sapiensENSP0000047695579.08563.3987ficedula_albicollisENSFALP0000000740877.070161.7834
ENSG00000170935homo_sapiensENSP0000047695577.124262.0915hippocampus_comesENSHCOP0000001410174.213859.7484
ENSG00000170935homo_sapiensENSP0000047695575.81758.8235cyprinus_carpio_carpioENSCCRP0000014522356.585443.9024
ENSG00000170935homo_sapiensENSP0000047695579.738662.0915cyprinus_carpio_carpioENSCCRP0000014297578.709761.2903
ENSG00000170935homo_sapiensENSP0000047695578.431462.0915coturnix_japonicaENSCJPP0000501498476.433160.5096
ENSG00000170935homo_sapiensENSP0000047695579.738663.3987poecilia_latipinnaENSPLAP0000003093074.390259.1463
ENSG00000170935homo_sapiensENSP0000047695579.738661.4379sinocyclocheilus_grahamiENSSGRP0000001329075.308658.0247
ENSG00000170935homo_sapiensENSP0000047695546.405235.9477sinocyclocheilus_grahamiENSSGRP0000005578568.269252.8846
ENSG00000170935homo_sapiensENSP0000047695579.738662.7451maylandia_zebraENSMZEP0000502402674.390258.5366
ENSG00000170935homo_sapiensENSP0000047695578.431463.3987tetraodon_nigroviridisENSTNIP0000000880976.923162.1795
ENSG00000170935homo_sapiensENSP0000047695581.699364.0523paramormyrops_kingsleyaeENSPKIP0000001049376.219559.7561
ENSG00000170935homo_sapiensENSP0000047695581.699366.0131scleropages_formosusENSSFOP0001502330476.219561.5854
ENSG00000170935homo_sapiensENSP0000047695579.08564.0523leptobrachium_leishanenseENSLLEP0000001082579.08564.0523
ENSG00000170935homo_sapiensENSP0000047695579.08561.4379scophthalmus_maximusENSSMAP0000006134356.542143.9252
ENSG00000170935homo_sapiensENSP0000047695579.08563.3987oryzias_melastigmaENSOMEP0000002781173.780559.1463

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000339enables RNA cap binding1IBAHomo_sapiens(9606)Function
GO:0000398involved_in mRNA splicing, via spliceosome1IBAHomo_sapiens(9606)Process
GO:0005846part_of nuclear cap binding complex1IBAHomo_sapiens(9606)Component
GO:0045292involved_in mRNA cis splicing, via spliceosome1IEAHomo_sapiens(9606)Process

Expression