Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases Disease
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions N.A.
Localizations Stress granucle
BulkPerturb-seq

Description

Ensembl ID ENSG00000168014 Gene ID 26005 Accession 24564
Symbol C2CD3 Alias OFD14 Full Name C2 domain containing 3 centriole elongation regulator
Status Confidence Length 158493 bases Strand Minus strand
Position 11 : 74012718 - 74171210 RNA binding domain N.A.
Summary This gene encodes a protein that functions as a regulator of centriole elongation. Studies of the orthologous mouse protein show that it promotes centriolar distal appendage assembly and is also required for the recruitment of other ciliogenic proteins, including intraflagellar transport proteins. Mutations in this gene cause orofaciodigital syndrome XIV (OFD14), a ciliopathy resulting in malformations of the oral cavity, face and digits. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Nov 2014]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
C2CD3-207 ENST00000442398 7683 1921aa ENSP00000404577
C2CD3-223 ENST00000680231 6977 2308aa ENSP00000505413
C2CD3-202 ENST00000334126 7939 2353aa ENSP00000334379
C2CD3-236 ENST00000681609 7777 427aa ENSP00000505133
C2CD3-232 ENST00000681291 7767 129aa ENSP00000505182
C2CD3-228 ENST00000680839 7289 129aa ENSP00000506002
C2CD3-239 ENST00000681924 7808 1314aa ENSP00000505101
C2CD3-226 ENST00000680665 7977 1662aa ENSP00000505527
C2CD3-211 ENST00000538625 3128 No protein -
C2CD3-237 ENST00000681811 7614 1537aa ENSP00000506315
C2CD3-235 ENST00000681385 7361 129aa ENSP00000505069
C2CD3-230 ENST00000681143 7297 2218aa ENSP00000505970
C2CD3-219 ENST00000679415 7670 129aa ENSP00000505672
C2CD3-220 ENST00000679906 7598 2301aa ENSP00000505021
C2CD3-238 ENST00000681829 7206 2343aa ENSP00000505375
C2CD3-215 ENST00000542452 1031 No protein -
C2CD3-233 ENST00000681310 5983 1938aa ENSP00000506236
C2CD3-201 ENST00000313663 6283 1963aa ENSP00000323339
C2CD3-204 ENST00000414160 6007 1968aa ENSP00000388750
C2CD3-210 ENST00000538361 6163 1937aa ENSP00000441742
C2CD3-231 ENST00000681233 8065 No protein -
C2CD3-221 ENST00000679940 2074 No protein -
C2CD3-216 ENST00000542484 1091 No protein -
C2CD3-213 ENST00000540057 556 No protein -
C2CD3-224 ENST00000680306 3189 No protein -
C2CD3-209 ENST00000537285 871 No protein -
C2CD3-229 ENST00000681000 2966 No protein -
C2CD3-203 ENST00000366334 727 No protein -
C2CD3-205 ENST00000415191 2587 No protein -
C2CD3-227 ENST00000680718 3216 506aa ENSP00000505340
C2CD3-212 ENST00000539061 2640 417aa ENSP00000445933
C2CD3-206 ENST00000436679 1134 No protein -
C2CD3-225 ENST00000680645 2401 406aa ENSP00000506347
C2CD3-222 ENST00000680173 2535 No protein -
C2CD3-234 ENST00000681345 767 143aa ENSP00000504924
C2CD3-214 ENST00000541922 936 No protein -
C2CD3-208 ENST00000535954 574 159aa ENSP00000439343
C2CD3-218 ENST00000544293 731 No protein -
C2CD3-217 ENST00000542930 524 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
11180Hip2.24926776039999E-717903296

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0001701involved_in in utero embryonic development1IEAHomo_sapiens(9606)Process
GO:0001947involved_in heart looping1IEAHomo_sapiens(9606)Process
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005813located_in centrosome1IDAHomo_sapiens(9606)Component
GO:0005814is_active_in centriole2IBA,IDAHomo_sapiens(9606)Component
GO:0005829located_in cytosol1TASHomo_sapiens(9606)Component
GO:0007420involved_in brain development1IEAHomo_sapiens(9606)Process
GO:0008589involved_in regulation of smoothened signaling pathway1IEAHomo_sapiens(9606)Process
GO:0016485involved_in protein processing1IEAHomo_sapiens(9606)Process
GO:0021915involved_in neural tube development1IEAHomo_sapiens(9606)Process
GO:0021997involved_in neural plate axis specification1IEAHomo_sapiens(9606)Process
GO:0030162involved_in regulation of proteolysis1IEAHomo_sapiens(9606)Process
GO:0034451is_active_in centriolar satellite2IBA,IDAHomo_sapiens(9606)Component
GO:0036064located_in ciliary basal body1IEAHomo_sapiens(9606)Component
GO:0042733involved_in embryonic digit morphogenesis1IEAHomo_sapiens(9606)Process
GO:0060271involved_in cilium assembly1IBAHomo_sapiens(9606)Process
GO:0061511involved_in centriole elongation2IBA,IDAHomo_sapiens(9606)Process
GO:0071539involved_in protein localization to centrosome1IDAHomo_sapiens(9606)Process
GO:1905515involved_in non-motile cilium assembly1IMPHomo_sapiens(9606)Process

Expression