Functions and Diseases

RBP Type Canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions E3 ligaseTF
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000167967 Gene ID 1877 Accession 3121
Symbol E4F1 Alias E4F Full Name E4F transcription factor 1
Status Confidence Length 12163 bases Strand Plus strand
Position 16 : 2223580 - 2235742 RNA binding domain zf-met
Summary The zinc finger protein encoded by this gene is one of several cellular transcription factors whose DNA-binding activities are regulated through the action of adenovirus E1A. A 50-kDa amino-terminal product is generated from the full-length protein through proteolytic cleavage. The protein is differentially regulated by E1A-induced phosphorylation. The full-length gene product represses transcription from the E4 promoter in the absence of E1A, while the 50-kDa form acts as a transcriptional activator in its presence. Alternative splicing results in multiple transcripts encoding different proteins. [provided by RefSeq, Jan 2014]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000454652 zf-met PF12874 0.0007 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
E4F1-206 ENST00000565090 2028 607aa ENSP00000456760
E4F1-201 ENST00000301727 2548 784aa ENSP00000301727
E4F1-204 ENST00000564139 2493 654aa ENSP00000457672
E4F1-202 ENST00000562589 817 208aa ENSP00000456005
E4F1-207 ENST00000565413 940 272aa ENSP00000454652
E4F1-209 ENST00000569796 5931 No protein -
E4F1-203 ENST00000563643 793 No protein -
E4F1-205 ENST00000564930 297 No protein -
E4F1-208 ENST00000567111 691 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000122involved_in negative regulation of transcription by RNA polymerase II1IDAHomo_sapiens(9606)Process
GO:0000977enables RNA polymerase II transcription regulatory region sequence-specific DNA binding1IDAHomo_sapiens(9606)Function
GO:0000978enables RNA polymerase II cis-regulatory region sequence-specific DNA binding1IBAHomo_sapiens(9606)Function
GO:0001227enables DNA-binding transcription repressor activity, RNA polymerase II-specific1IDAHomo_sapiens(9606)Function
GO:0001228enables DNA-binding transcription activator activity, RNA polymerase II-specific1IDAHomo_sapiens(9606)Function
GO:0003700enables DNA-binding transcription factor activity1IBAHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005654located_in nucleoplasm1IDAHomo_sapiens(9606)Component
GO:0005737located_in cytoplasm1IEAHomo_sapiens(9606)Component
GO:0005819located_in spindle1IEAHomo_sapiens(9606)Component
GO:0006260involved_in DNA replication1IEAHomo_sapiens(9606)Process
GO:0006357involved_in regulation of transcription by RNA polymerase II1IBAHomo_sapiens(9606)Process
GO:0007049involved_in cell cycle1IEAHomo_sapiens(9606)Process
GO:0009794involved_in regulation of mitotic cell cycle, embryonic1IEAHomo_sapiens(9606)Process
GO:0010564involved_in regulation of cell cycle process1IDAHomo_sapiens(9606)Process
GO:0016567involved_in protein ubiquitination1IEAHomo_sapiens(9606)Process
GO:0016604located_in nuclear body1IDAHomo_sapiens(9606)Component
GO:0016740enables transferase activity1IEAHomo_sapiens(9606)Function
GO:0035497enables cAMP response element binding1IDAHomo_sapiens(9606)Function
GO:0045944involved_in positive regulation of transcription by RNA polymerase II1IDAHomo_sapiens(9606)Process
GO:0046872enables metal ion binding1IEAHomo_sapiens(9606)Function
GO:0051301involved_in cell division1IEAHomo_sapiens(9606)Process
GO:0051726involved_in regulation of cell cycle1TASHomo_sapiens(9606)Process
GO:0061629enables RNA polymerase II-specific DNA-binding transcription factor binding1IPIHomo_sapiens(9606)Function

Expression