Functions and Diseases

RBP Type Canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions TF
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000146285 Gene ID 256380 Accession 21397
Symbol SCML4 Alias dJ47M23.1 Full Name Scm polycomb group protein like 4
Status Confidence Length 122164 bases Strand Minus strand
Position 6 : 107702154 - 107824317 RNA binding domain RBR
Summary Predicted to enable chromatin binding activity and histone binding activity. Predicted to be involved in negative regulation of transcription, DNA-templated. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000358016 RBR PF17208 7.1e-16 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
24551Muscle, Skeletal4.2970000E-005-
24602Muscle, Skeletal6.8900000E-005-
24618Muscle, Skeletal2.6260000E-005-

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0003682enables chromatin binding1IBAHomo_sapiens(9606)Function
GO:0005634is_active_in nucleus1IBAHomo_sapiens(9606)Component
GO:0042393enables histone binding1IBAHomo_sapiens(9606)Function
GO:0045892involved_in negative regulation of DNA-templated transcription1IBAHomo_sapiens(9606)Process

Expression