Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions N.A.
Localizations Stress granucle
BulkPerturb-seq

Description

Ensembl ID ENSG00000143228 Gene ID 83540 Accession 14621
Symbol NUF2 Alias CDCA1;CT106;NUF2R Full Name NUF2 component of NDC80 kinetochore complex
Status Confidence Length 89189 bases Strand Plus strand
Position 1 : 163266576 - 163355764 RNA binding domain N.A.
Summary This gene encodes a protein that is highly similar to yeast Nuf2, a component of a conserved protein complex associated with the centromere. Yeast Nuf2 disappears from the centromere during meiotic prophase when centromeres lose their connection to the spindle pole body, and plays a regulatory role in chromosome segregation. The encoded protein is found to be associated with centromeres of mitotic HeLa cells, which suggests that this protein is a functional homolog of yeast Nuf2. Alternatively spliced transcript variants that encode the same protein have been described. [provided by RefSeq, Jul 2008]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
NUF2-212 ENST00000534289 567 124aa ENSP00000433533
NUF2-204 ENST00000450453 861 145aa ENSP00000403252
NUF2-208 ENST00000524800 1845 417aa ENSP00000436888
NUF2-203 ENST00000442820 1133 202aa ENSP00000392652
NUF2-202 ENST00000367900 1842 464aa ENSP00000356875
NUF2-201 ENST00000271452 1964 464aa ENSP00000271452
NUF2-206 ENST00000490881 695 No protein -
NUF2-205 ENST00000487578 779 No protein -
NUF2-207 ENST00000497990 885 221aa ENSP00000436473
NUF2-210 ENST00000527439 940 No protein -
NUF2-209 ENST00000527120 351 No protein -
NUF2-211 ENST00000531529 255 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
382Respiratory Function Tests3.08634497827468E-517903307
4359Cholesterol, LDL3.04599638960568E-517903299
40820Platelet Function Tests9.2544658E-006-

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000775located_in chromosome, centromeric region1NASHomo_sapiens(9606)Component
GO:0000776located_in kinetochore1IDAHomo_sapiens(9606)Component
GO:0003674enables molecular_function1NDHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005654located_in nucleoplasm1IDAHomo_sapiens(9606)Component
GO:0005829located_in cytosol2IDA,TASHomo_sapiens(9606)Component
GO:0007052involved_in mitotic spindle organization1IBAHomo_sapiens(9606)Process
GO:0007059involved_in chromosome segregation1NASHomo_sapiens(9606)Process
GO:0007094involved_in mitotic spindle assembly checkpoint signaling1NASHomo_sapiens(9606)Process
GO:0008608involved_in attachment of spindle microtubules to kinetochore1IDAHomo_sapiens(9606)Process
GO:0016020located_in membrane1HDAHomo_sapiens(9606)Component
GO:0031262part_of Ndc80 complex3IBA,IDA,IPIHomo_sapiens(9606)Component
GO:0044877enables protein-containing complex binding1IBAHomo_sapiens(9606)Function
GO:0045132involved_in meiotic chromosome segregation1IBAHomo_sapiens(9606)Process
GO:0051301involved_in cell division1IEAHomo_sapiens(9606)Process
GO:0051315involved_in attachment of mitotic spindle microtubules to kinetochore1IBAHomo_sapiens(9606)Process
GO:0051383involved_in kinetochore organization1IBAHomo_sapiens(9606)Process

Expression