Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases N.A.
Drug Drug
Main interacting RNAs N.A.
Moonlighting functions Metabolic enzyme
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000136930 Gene ID 5695 Accession 9544
Symbol PSMB7 Alias NA Full Name proteasome 20S subunit beta 7
Status Confidence Length 61980 bases Strand Minus strand
Position 9 : 124353465 - 124415444 RNA binding domain N.A.
Summary The proteasome is a multicatalytic proteinase complex with a highly ordered ring-shaped 20S core structure. The core structure is composed of 4 rings of 28 non-identical subunits; 2 rings are composed of 7 alpha subunits and 2 rings are composed of 7 beta subunits. Proteasomes are distributed throughout eukaryotic cells at a high concentration and cleave peptides in an ATP/ubiquitin-dependent process in a non-lysosomal pathway. The encoded protein is a member of the proteasome B-type family, also known as the T1B family, and is a 20S core beta subunit in the proteasome. Expression of this catalytic subunit is downregulated by gamma interferon, and proteolytic processing is required to generate a mature subunit. A pseudogene of this gene is located on the long arm of chromosome 14. [provided by RefSeq, Jul 2012]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
PSMB7-201 ENST00000259457 984 277aa ENSP00000259457
PSMB7-206 ENST00000498485 967 No protein -
PSMB7-204 ENST00000474081 546 No protein -
PSMB7-205 ENST00000478817 388 No protein -
PSMB7-202 ENST00000441097 650 210aa ENSP00000393157
PSMB7-203 ENST00000466951 462 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000502part_of proteasome complex2IDA,NASHomo_sapiens(9606)Component
GO:0004175enables endopeptidase activity1IBAHomo_sapiens(9606)Function
GO:0004298enables threonine-type endopeptidase activity1IEAHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005576located_in extracellular region1TASHomo_sapiens(9606)Component
GO:0005634located_in nucleus3HDA,IBA,IDAHomo_sapiens(9606)Component
GO:0005654located_in nucleoplasm2IDA,TASHomo_sapiens(9606)Component
GO:0005737is_active_in cytoplasm1IDAHomo_sapiens(9606)Component
GO:0005829located_in cytosol2IDA,TASHomo_sapiens(9606)Component
GO:0005839part_of proteasome core complex2IDA,ISSHomo_sapiens(9606)Component
GO:0010498involved_in proteasomal protein catabolic process1IBAHomo_sapiens(9606)Process
GO:0016604located_in nuclear body1IDAHomo_sapiens(9606)Component
GO:0019774part_of proteasome core complex, beta-subunit complex2IBA,ISSHomo_sapiens(9606)Component
GO:0034774located_in secretory granule lumen1TASHomo_sapiens(9606)Component
GO:0043161involved_in proteasome-mediated ubiquitin-dependent protein catabolic process1NASHomo_sapiens(9606)Process
GO:1904813located_in ficolin-1-rich granule lumen1TASHomo_sapiens(9606)Component

Expression