Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases SARS-COV-2
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions Metabolic enzyme
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000130005 Gene ID 2593 Accession 4136
Symbol GAMT Alias PIG2;CCDS2;TP53I2;HEL-S-20 Full Name guanidinoacetate N-methyltransferase
Status Confidence Length 4545 bases Strand Minus strand
Position 19 : 1397026 - 1401570 RNA binding domain N.A.
Summary The protein encoded by this gene is a methyltransferase that converts guanidoacetate to creatine, using S-adenosylmethionine as the methyl donor. Defects in this gene have been implicated in neurologic syndromes and muscular hypotonia, probably due to creatine deficiency and accumulation of guanidinoacetate in the brain of affected individuals. Two transcript variants encoding different isoforms have been described for this gene. Pseudogenes of this gene are found on chromosomes 2 and 13. [provided by RefSeq, Feb 2012]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
GAMT-201 ENST00000252288 1110 236aa ENSP00000252288
GAMT-205 ENST00000640762 751 213aa ENSP00000492031
GAMT-204 ENST00000640164 520 No protein -
GAMT-202 ENST00000447102 1769 269aa ENSP00000403536
GAMT-203 ENST00000591788 401 108aa ENSP00000466341

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005634is_active_in nucleus1IBAHomo_sapiens(9606)Component
GO:0005737is_active_in cytoplasm1IBAHomo_sapiens(9606)Component
GO:0005829located_in cytosol1TASHomo_sapiens(9606)Component
GO:0006600involved_in creatine metabolic process1TASHomo_sapiens(9606)Process
GO:0006601involved_in creatine biosynthetic process3IBA,IDA,IEAHomo_sapiens(9606)Process
GO:0006936involved_in muscle contraction1TASHomo_sapiens(9606)Process
GO:0007283involved_in spermatogenesis1IEAHomo_sapiens(9606)Process
GO:0008168enables methyltransferase activity1TASHomo_sapiens(9606)Function
GO:0009887involved_in animal organ morphogenesis1IEAHomo_sapiens(9606)Process
GO:0030731enables guanidinoacetate N-methyltransferase activity2IBA,IMPHomo_sapiens(9606)Function
GO:0032259involved_in methylation1IEAHomo_sapiens(9606)Process
GO:0040014involved_in regulation of multicellular organism growth1IEAHomo_sapiens(9606)Process

Expression