Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions N.A.
Localizations Nucleoli
BulkPerturb-seq

Description

Ensembl ID ENSG00000126226 Gene ID 55795 Accession 25653
Symbol PCID2 Alias Full Name
Status Confidence Length 31180 bases Strand Minus strand
Position 13 : 113177536 - 113208715 RNA binding domain N.A.
Summary

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
PCID2-202 ENST00000337344 1897 399aa ENSP00000337405
PCID2-216 ENST00000622406 1937 453aa ENSP00000479494
PCID2-205 ENST00000375477 1654 399aa ENSP00000364626
PCID2-206 ENST00000375479 1671 399aa ENSP00000364628
PCID2-209 ENST00000463102 599 No protein -
PCID2-215 ENST00000493650 4202 No protein -
PCID2-204 ENST00000375459 1668 397aa ENSP00000364608
PCID2-201 ENST00000246505 1786 453aa ENSP00000246505
PCID2-207 ENST00000462653 669 No protein -
PCID2-203 ENST00000375457 2372 397aa ENSP00000364606
PCID2-210 ENST00000473462 859 No protein -
PCID2-211 ENST00000475433 776 No protein -
PCID2-212 ENST00000480971 701 No protein -
PCID2-213 ENST00000484641 800 No protein -
PCID2-214 ENST00000491548 654 No protein -
PCID2-208 ENST00000462853 413 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000973involved_in post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery1IBAHomo_sapiens(9606)Process
GO:0003690enables double-stranded DNA binding1IBAHomo_sapiens(9606)Function
GO:0003723enables RNA binding1IBAHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005634located_in nucleus1IDAHomo_sapiens(9606)Component
GO:0005737located_in cytoplasm1IDAHomo_sapiens(9606)Component
GO:0006368involved_in transcription elongation by RNA polymerase II1IBAHomo_sapiens(9606)Process
GO:0015031involved_in protein transport1IEAHomo_sapiens(9606)Process
GO:0016973involved_in poly(A)+ mRNA export from nucleus1IBAHomo_sapiens(9606)Process
GO:0043066involved_in negative regulation of apoptotic process1IMPHomo_sapiens(9606)Process
GO:0043488involved_in regulation of mRNA stability1IMPHomo_sapiens(9606)Process
GO:0044615part_of nuclear pore nuclear basket1IDAHomo_sapiens(9606)Component
GO:0045579involved_in positive regulation of B cell differentiation1IEAHomo_sapiens(9606)Process
GO:0045893involved_in positive regulation of DNA-templated transcription1IMPHomo_sapiens(9606)Process
GO:0048536involved_in spleen development1ISSHomo_sapiens(9606)Process
GO:0060633involved_in negative regulation of transcription initiation by RNA polymerase II1ISSHomo_sapiens(9606)Process
GO:0070390part_of transcription export complex 22IBA,IDAHomo_sapiens(9606)Component
GO:0070828involved_in heterochromatin organization1ISSHomo_sapiens(9606)Process
GO:0090267involved_in positive regulation of mitotic cell cycle spindle assembly checkpoint1IMPHomo_sapiens(9606)Process
GO:1905457involved_in negative regulation of lymphoid progenitor cell differentiation1ISSHomo_sapiens(9606)Process
GO:2000117involved_in negative regulation of cysteine-type endopeptidase activity1IMPHomo_sapiens(9606)Process

Expression