RBP Type
Non-canonical_RBPs
Diseases
Disease
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
N.A.
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000119878 Gene ID
9419
Accession
14312
Symbol
CRIPT
Alias
SSMDF;HSPC139
Full Name
CXXC repeat containing interactor of PDZ3 domain
Status
Confidence
Length
12962 bases
Strand
Plus strand
Position
2 : 46617215 - 46630176
RNA binding domain
N.A.
Summary
This gene encodes a protein that binds to the PDZ3 peptide recognition domain. The encoded protein may modulates protein interactions with the cytoskeleton. A mutation in this gene resulted in short stature with microcephaly and distinctive facies. [provided by RefSeq, Jun 2014]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
28476223
Genetics of Short Stature.
Hee Youn Jee
2017-06-01
Endocrinology and metabolism clinics of North America
Name
Transcript ID
bp
Protein
Translation ID
CRIPT-202
ENST00000486447
1724
No protein
-
CRIPT-201
ENST00000238892
6323
101aa
ENSP00000238892
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
6689 Platelet Aggregation 6.89189881519342E-6 17903294 6704 Platelet Aggregation 5.06686472749397E-6 17903294 9212 Echocardiography 5.48353176781026E-5 17903301 30838 Erythrocyte Indices 3.4030000E-005 - 30881 Erythrocyte Indices 5.7000000E-005 - 62013 Alcohol Drinking 8E-7 24376456 62014 Blood Pressure 8E-7 24376456 84563 Body Height 3E-13 20881960 87875 Alcohol Drinking 1E-6 24376456 87876 Blood Pressure 1E-6 24376456 88561 Alzheimer Disease 2E-6 28247064 88562 Cerebrospinal Fluid 2E-6 28247064 88563 tau Proteins 2E-6 28247064
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005681 part_of spliceosomal complex 1 IEA Homo_sapiens(9606) Component GO:0005737 located_in cytoplasm 1 IEA Homo_sapiens(9606) Component GO:0006397 involved_in mRNA processing 1 IEA Homo_sapiens(9606) Process GO:0008017 enables microtubule binding 2 IBA,ISS Homo_sapiens(9606) Function GO:0008380 involved_in RNA splicing 1 IEA Homo_sapiens(9606) Process GO:0014069 located_in postsynaptic density 1 ISS Homo_sapiens(9606) Component GO:0030165 enables PDZ domain binding 2 IBA,IDA Homo_sapiens(9606) Function GO:0030425 is_active_in dendrite 2 IBA,ISS Homo_sapiens(9606) Component GO:0031122 involved_in cytoplasmic microtubule organization 2 IBA,ISS Homo_sapiens(9606) Process GO:0035372 involved_in protein localization to microtubule 1 ISS Homo_sapiens(9606) Process GO:0043025 located_in neuronal cell body 1 ISS Homo_sapiens(9606) Component GO:0043197 located_in dendritic spine 1 ISS Homo_sapiens(9606) Component GO:0043198 located_in dendritic shaft 1 ISS Homo_sapiens(9606) Component GO:0044877 enables protein-containing complex binding 1 ISS Homo_sapiens(9606) Function GO:0045184 involved_in establishment of protein localization 1 ISS Homo_sapiens(9606) Process GO:0097110 enables scaffold protein binding 1 IDA Homo_sapiens(9606) Function GO:0098978 located_in glutamatergic synapse 1 IEA Homo_sapiens(9606) Component GO:0099092 located_in postsynaptic density, intracellular component 1 IEA Homo_sapiens(9606) Component GO:0099151 involved_in regulation of postsynaptic density assembly 1 IEA Homo_sapiens(9606) Process GO:1902897 involved_in regulation of postsynaptic density protein 95 clustering 1 ISS Homo_sapiens(9606) Process
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