RBP Type
Canonical_RBPs
Diseases
Disease
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
N.A.
Localizations
Nucleoli
BulkPerturb-seq
Ensembl ID ENSG00000117385 Gene ID
64175
Accession
19316
Symbol
P3H1
Alias
OI8;GROS1;LEPRE1
Full Name
prolyl 3-hydroxylase 1
Status
Confidence
Length
20750 bases
Strand
Minus strand
Position
1 : 42746335 - 42767084
RNA binding domain
2OG-FeII_Oxy
Summary
This gene encodes an enzyme that is a member of the collagen prolyl hydroxylase family. These enzymes are localized to the endoplasmic reticulum and their activity is required for proper collagen synthesis and assembly. Mutations in this gene are associated with osteogenesis imperfecta type VIII. Three alternatively spliced transcript variants encoding different isoforms have been described. Other variants may exist, but their biological validity has not been determined. [provided by RefSeq, Aug 2011]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
ENSP00000380245
2OG-FeII_Oxy
PF03171
4.9e-09
1
ENSP00000236040
2OG-FeII_Oxy
PF03171
5.3e-09
1
ENSP00000296388
2OG-FeII_Oxy
PF03171
5.4e-09
1
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
P3H1-204
ENST00000397054
2705
697aa
ENSP00000380245
P3H1-207
ENST00000460031
2726
No protein
-
P3H1-202
ENST00000296388
2591
736aa
ENSP00000296388
P3H1-201
ENST00000236040
2993
804aa
ENSP00000236040
P3H1-214
ENST00000495874
2813
No protein
-
P3H1-209
ENST00000462474
581
No protein
-
P3H1-211
ENST00000472802
646
No protein
-
P3H1-205
ENST00000431412
836
222aa
ENSP00000408056
P3H1-208
ENST00000460831
585
No protein
-
P3H1-212
ENST00000481465
728
No protein
-
P3H1-206
ENST00000447502
453
No protein
-
P3H1-210
ENST00000463465
897
No protein
-
P3H1-203
ENST00000372526
654
207aa
ENSP00000361604
P3H1-213
ENST00000492956
3001
No protein
-
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0003674 enables molecular_function 1 ND Homo_sapiens(9606) Function GO:0005506 enables iron ion binding 1 IEA Homo_sapiens(9606) Function GO:0005515 enables protein binding 1 ISS Homo_sapiens(9606) Function GO:0005518 contributes_to collagen binding 1 ISS Homo_sapiens(9606) Function GO:0005783 is_active_in endoplasmic reticulum 2 IBA,IDA Homo_sapiens(9606) Component GO:0005788 located_in endoplasmic reticulum lumen 1 TAS Homo_sapiens(9606) Component GO:0006457 involved_in protein folding 1 IMP Homo_sapiens(9606) Process GO:0008285 involved_in negative regulation of cell population proliferation 1 NAS Homo_sapiens(9606) Process GO:0010976 involved_in positive regulation of neuron projection development 1 ISS Homo_sapiens(9606) Process GO:0016020 located_in membrane 1 HDA Homo_sapiens(9606) Component GO:0018126 involved_in protein hydroxylation 1 IMP Homo_sapiens(9606) Process GO:0019797 enables procollagen-proline 3-dioxygenase activity 2 IBA,ISS Homo_sapiens(9606) Function GO:0031418 enables L-ascorbic acid binding 1 IEA Homo_sapiens(9606) Function GO:0032963 involved_in collagen metabolic process 2 IBA,ISS Homo_sapiens(9606) Process GO:0032991 part_of protein-containing complex 1 ISS Homo_sapiens(9606) Component GO:0050708 involved_in regulation of protein secretion 1 IMP Homo_sapiens(9606) Process GO:0050821 involved_in protein stabilization 1 IMP Homo_sapiens(9606) Process GO:0060348 involved_in bone development 1 IMP Homo_sapiens(9606) Process GO:0061077 involved_in chaperone-mediated protein folding 1 ISS Homo_sapiens(9606) Process GO:0062023 colocalizes_with collagen-containing extracellular matrix 1 HDA Homo_sapiens(9606) Component GO:0070062 located_in extracellular exosome 1 HDA Homo_sapiens(9606) Component GO:1901874 involved_in negative regulation of post-translational protein modification 1 IMP Homo_sapiens(9606) Process
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