Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases Disease
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions Metabolic enzyme
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000112425 Gene ID 7957 Accession 3413
Symbol EPM2A Alias EPM2;MELF Full Name EPM2A glucan phosphatase, laforin
Status Confidence Length 353489 bases Strand Minus strand
Position 6 : 145382535 - 145736023 RNA binding domain N.A.
Summary This gene encodes a dual-specificity phosphatase and may be involved in the regulation of glycogen metabolism. The protein acts on complex carbohydrates to prevent glycogen hyperphosphorylation, thus avoiding the formation of insoluble aggregates. Loss-of-function mutations in this gene have been associated with Lafora disease, a rare, adult-onset recessive neurodegenerative disease, which results in myoclonus epilepsy and usually results in death several years after the onset of symptoms. The disease is characterized by the accumulation of insoluble particles called Lafora bodies, which are derived from glycogen. [provided by RefSeq, Jan 2018]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
EPM2A-211 ENST00000638717 2118 209aa ENSP00000491330
EPM2A-203 ENST00000450221 659 144aa ENSP00000414900
EPM2A-220 ENST00000639799 3649 No protein -
EPM2A-214 ENST00000639049 3335 127aa ENSP00000491590
EPM2A-216 ENST00000639423 2886 193aa ENSP00000492701
EPM2A-201 ENST00000367519 3129 331aa ENSP00000356489
EPM2A-209 ENST00000638554 3045 134aa ENSP00000492823
EPM2A-207 ENST00000611340 2786 193aa ENSP00000480268
EPM2A-202 ENST00000435470 1278 317aa ENSP00000405913
EPM2A-208 ENST00000638262 2679 224aa ENSP00000492876
EPM2A-217 ENST00000639465 2203 193aa ENSP00000491180
EPM2A-210 ENST00000638597 1873 No protein -
EPM2A-225 ENST00000640351 1388 18aa ENSP00000491251
EPM2A-223 ENST00000640225 1516 70aa ENSP00000492179
EPM2A-215 ENST00000639106 5533 No protein -
EPM2A-222 ENST00000639859 6926 No protein -
EPM2A-228 ENST00000640980 647 86aa ENSP00000491191
EPM2A-213 ENST00000638783 801 193aa ENSP00000491338
EPM2A-212 ENST00000638778 813 193aa ENSP00000491353
EPM2A-218 ENST00000639648 551 No protein -
EPM2A-221 ENST00000639849 804 70aa ENSP00000491224
EPM2A-205 ENST00000489412 497 No protein -
EPM2A-206 ENST00000496228 560 No protein -
EPM2A-224 ENST00000640297 374 No protein -
EPM2A-226 ENST00000640426 752 No protein -
EPM2A-204 ENST00000461700 555 No protein -
EPM2A-227 ENST00000640898 322 No protein -
EPM2A-219 ENST00000639649 849 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005634located_in nucleus1IEAHomo_sapiens(9606)Component
GO:0016239acts_upstream_of_or_within positive regulation of macroautophagy1IMPHomo_sapiens(9606)Process
GO:0032007acts_upstream_of_or_within negative regulation of TOR signaling1IMPHomo_sapiens(9606)Process

Expression