Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases Disease
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions Metabolic enzyme
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000110090 Gene ID 1374 Accession 2328
Symbol CPT1A Alias CPT1;CPT1-L;L-CPT1 Full Name carnitine palmitoyltransferase 1A
Status Confidence Length 89791 bases Strand Minus strand
Position 11 : 68754620 - 68844410 RNA binding domain N.A.
Summary The mitochondrial oxidation of long-chain fatty acids is initiated by the sequential action of carnitine palmitoyltransferase I (which is located in the outer membrane and is detergent-labile) and carnitine palmitoyltransferase II (which is located in the inner membrane and is detergent-stable), together with a carnitine-acylcarnitine translocase. CPT I is the key enzyme in the carnitine-dependent transport across the mitochondrial inner membrane and its deficiency results in a decreased rate of fatty acid beta-oxidation. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
CPT1A-206 ENST00000540367 2496 756aa ENSP00000439084
CPT1A-202 ENST00000376618 2635 756aa ENSP00000365803
CPT1A-201 ENST00000265641 5238 773aa ENSP00000265641
CPT1A-205 ENST00000539743 2382 773aa ENSP00000446108
CPT1A-203 ENST00000537756 585 No protein -
CPT1A-204 ENST00000538994 617 78aa ENSP00000454332
CPT1A-208 ENST00000565318 511 134aa ENSP00000457826
CPT1A-209 ENST00000569129 499 117aa ENSP00000455116
CPT1A-207 ENST00000561996 559 93aa ENSP00000457663

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
26337Arteries3.7500000E-005-
40178Platelet Function Tests5.2300000E-006-
48104Autistic Disorder1.3578000E-005-
49810Child Development Disorders, Pervasive5.6331200E-005-
50426Child Development Disorders, Pervasive1.7345000E-005-
51854Child Development Disorders, Pervasive2.2193000E-005-
72960Energy Metabolism4E-623251661

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0001676involved_in long-chain fatty acid metabolic process1IDAHomo_sapiens(9606)Process
GO:0004095enables carnitine O-palmitoyltransferase activity4IBA,IDA,IMP,TASHomo_sapiens(9606)Function
GO:0005739is_active_in mitochondrion2IBA,IDAHomo_sapiens(9606)Component
GO:0005741located_in mitochondrial outer membrane3IMP,ISS,TASHomo_sapiens(9606)Component
GO:0006006involved_in glucose metabolic process1IEAHomo_sapiens(9606)Process
GO:0006631involved_in fatty acid metabolic process1IBAHomo_sapiens(9606)Process
GO:0006635involved_in fatty acid beta-oxidation1IEAHomo_sapiens(9606)Process
GO:0006641involved_in triglyceride metabolic process1IEAHomo_sapiens(9606)Process
GO:0006853involved_in carnitine shuttle1TASHomo_sapiens(9606)Process
GO:0009410involved_in response to xenobiotic stimulus1IEAHomo_sapiens(9606)Process
GO:0009437involved_in carnitine metabolic process2IBA,IDAHomo_sapiens(9606)Process
GO:0010883involved_in regulation of lipid storage1IEAHomo_sapiens(9606)Process
GO:0014070involved_in response to organic cyclic compound1IEAHomo_sapiens(9606)Process
GO:0016020located_in membrane1HDAHomo_sapiens(9606)Component
GO:0030855involved_in epithelial cell differentiation1IEPHomo_sapiens(9606)Process
GO:0031667involved_in response to nutrient levels1IEAHomo_sapiens(9606)Process
GO:0032000involved_in positive regulation of fatty acid beta-oxidation1IEAHomo_sapiens(9606)Process
GO:0042755involved_in eating behavior1IEAHomo_sapiens(9606)Process
GO:0042802enables identical protein binding1IEAHomo_sapiens(9606)Function
GO:0043279involved_in response to alkaloid1IEAHomo_sapiens(9606)Process
GO:0045471involved_in response to ethanol1IEAHomo_sapiens(9606)Process
GO:0050796involved_in regulation of insulin secretion1IEAHomo_sapiens(9606)Process
GO:0071398involved_in cellular response to fatty acid1IEAHomo_sapiens(9606)Process
GO:0097421involved_in liver regeneration1IEAHomo_sapiens(9606)Process
GO:1904772involved_in response to tetrachloromethane1IEAHomo_sapiens(9606)Process
GO:1990698enables palmitoleoyltransferase activity1IEAHomo_sapiens(9606)Function

Expression