RBP Type	Non-canonical_RBPs
Diseases	Disease
Drug	N.A.
Main interacting RNAs	N.A.
Moonlighting functions	Metabolic enzyme
Localizations	N.A.
BulkPerturb-seq

Ensembl ID	ENSG00000108559	Gene ID	4927	Accession	8067
Symbol	NUP88	Alias	FADS4	Full Name	nucleoporin 88
Status	Confidence	Length	60497 bases	Strand	Minus strand
Position	17 : 5359668 - 5420164	RNA binding domain	N.A.
Summary	The nuclear pore complex is a massive structure that extends across the nuclear envelope, forming a gateway that regulates the flow of macromolecules between the nucleus and the cytoplasm. Nucleoporins, a family of 50 to 100 proteins, are the main components of the nuclear pore complex in eukaryotic cells. The protein encoded by this gene belongs to the nucleoporin family and is associated with the oncogenic nucleoporin CAN/Nup214 in a dynamic subcomplex. This protein is also overexpressed in a large number of malignant neoplasms and precancerous dysplasias. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Mar 2016]

Protein	Domain	Pfam ID	E-value	Domain number

Pubmed ID	Full Name	Cell	Author	Time	Doi

Pubmed ID	Title	Author	Time	Journal

Name	Transcript ID	bp	Protein	Translation ID
NUP88-214	ENST00000700529	4626	732aa	ENSP00000515034
NUP88-206	ENST00000573169	1195	No protein	-
NUP88-212	ENST00000576708	800	110aa	ENSP00000461334
NUP88-215	ENST00000700530	2270	657aa	ENSP00000515035
NUP88-216	ENST00000700531	5220	711aa	ENSP00000515036
NUP88-217	ENST00000700532	5185	699aa	ENSP00000515037
NUP88-218	ENST00000700533	5175	368aa	ENSP00000515038
NUP88-219	ENST00000700534	5235	441aa	ENSP00000515039
NUP88-220	ENST00000700535	5246	712aa	ENSP00000515040
NUP88-221	ENST00000700536	5283	169aa	ENSP00000515041
NUP88-222	ENST00000700537	5253	449aa	ENSP00000515042
NUP88-203	ENST00000572019	5474	151aa	ENSP00000515043
NUP88-223	ENST00000700538	5682	721aa	ENSP00000515044
NUP88-224	ENST00000700539	3329	435aa	ENSP00000515045
NUP88-225	ENST00000700540	3683	475aa	ENSP00000515046
NUP88-226	ENST00000700541	3465	368aa	ENSP00000515047
NUP88-227	ENST00000700542	3549	704aa	ENSP00000515048
NUP88-228	ENST00000700543	3534	688aa	ENSP00000515049
NUP88-201	ENST00000225696	3900	757aa	ENSP00000225696
NUP88-207	ENST00000573584	3611	741aa	ENSP00000458954
NUP88-229	ENST00000700544	3438	610aa	ENSP00000515050
NUP88-230	ENST00000700545	2909	229aa	ENSP00000515051
NUP88-209	ENST00000574855	434	No protein	-
NUP88-231	ENST00000700546	2023	646aa	ENSP00000515052
NUP88-208	ENST00000574087	548	No protein	-
NUP88-213	ENST00000576862	788	No protein	-
NUP88-211	ENST00000575976	599	No protein	-
NUP88-210	ENST00000574867	2081	No protein	-
NUP88-202	ENST00000570937	2671	98aa	ENSP00000515053
NUP88-232	ENST00000700547	2346	No protein	-
NUP88-233	ENST00000700548	321	No protein	-
NUP88-205	ENST00000572809	771	153aa	ENSP00000459370
NUP88-204	ENST00000572290	615	128aa	ENSP00000459979

Pathway ID	Pathway Name	Source

ensgID	Trait	pValue	Pubmed ID

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Ensembl ID	Source				Target
	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id

Ensembl ID	Source				Target
	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id

Go ID	Go term	No. evidence	Entries	Species	Category
GO:0000055	involved_in ribosomal large subunit export from nucleus	1	IBA	Homo_sapiens(9606)	Process
GO:0000056	involved_in ribosomal small subunit export from nucleus	1	IBA	Homo_sapiens(9606)	Process
GO:0005515	enables protein binding	1	IPI	Homo_sapiens(9606)	Function
GO:0005635	located_in nuclear envelope	1	IDA	Homo_sapiens(9606)	Component
GO:0005643	part_of nuclear pore	3	IBA,IDA,NAS	Homo_sapiens(9606)	Component
GO:0005654	located_in nucleoplasm	1	IDA	Homo_sapiens(9606)	Component
GO:0005829	located_in cytosol	1	TAS	Homo_sapiens(9606)	Component
GO:0006406	involved_in mRNA export from nucleus	1	IBA	Homo_sapiens(9606)	Process
GO:0006606	involved_in protein import into nucleus	1	IBA	Homo_sapiens(9606)	Process
GO:0006913	involved_in nucleocytoplasmic transport	1	NAS	Homo_sapiens(9606)	Process
GO:0017056	enables structural constituent of nuclear pore	1	IEA	Homo_sapiens(9606)	Function