RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Functions and Diseases

RBP Type	Non-canonical_RBPs
Diseases	N.A.
Drug	N.A.
Main interacting RNAs	N.A.
Moonlighting functions	N.A.
Localizations	Nucleoli
BulkPerturb-seq

Description

Ensembl ID	ENSG00000105058	Gene ID	26017	Accession	24563
Symbol	FAM32A	Alias	OTAG12;OTAG-12	Full Name	family with sequence similarity 32 member A
Status	Confidence	Length	6667 bases	Strand	Plus strand
Position	19 : 16185380 - 16192046	RNA binding domain	N.A.
Summary	Enables RNA binding activity. Predicted to be involved in apoptotic process. Located in nucleolus and nucleoplasm. [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal
33999210	dSPRINT: predicting DNA, RNA, ion, peptide and small molecule interaction sites within protein domains.	Anat Etzion-Fuchs	2021-07-21	Nucleic acids research

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
FAM32A-205	ENST00000589852	1168	92aa	ENSP00000465969
FAM32A-201	ENST00000263384	1463	112aa	ENSP00000263384
FAM32A-204	ENST00000588367	798	94aa	ENSP00000464939
FAM32A-202	ENST00000585831	896	107aa	ENSP00000467027
FAM32A-203	ENST00000587351	401	82aa	ENSP00000466294

Gene Model

Click here to download ENSG00000105058's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSG00000105058's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category
GO:0003723	enables RNA binding	1	HDA	Homo_sapiens(9606)	Function
GO:0005515	enables protein binding	1	IPI	Homo_sapiens(9606)	Function
GO:0005654	located_in nucleoplasm	2	IDA,TAS	Homo_sapiens(9606)	Component
GO:0005730	is_active_in nucleolus	2	IBA,IDA	Homo_sapiens(9606)	Component
GO:0006915	involved_in apoptotic process	1	IEA	Homo_sapiens(9606)	Process
GO:0007049	involved_in cell cycle	1	IEA	Homo_sapiens(9606)	Process
GO:0008150	involved_in biological_process	1	ND	Homo_sapiens(9606)	Process

Expression