Functions and Diseases

RBP Type Canonical_RBPs
Diseases Disease
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions E3 ligase
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000080561 Gene ID 11043 Accession 7096
Symbol MID2 Alias FXY2;RNF60;TRIM1;MRX101;XLID101 Full Name midline 2
Status Confidence Length 105883 bases Strand Plus strand
Position X : 107825755 - 107931637 RNA binding domain SPRY
Summary The protein encoded by this gene is a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. The protein localizes to microtubular structures in the cytoplasm. Alternate splicing of this gene results in two transcript variants encoding different isoforms. [provided by RefSeq, Feb 2009]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000413976 SPRY PF00622 3e-10 1
ENSP00000262843 SPRY PF00622 3.2e-10 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
MID2-203 ENST00000451923 758 218aa ENSP00000410730
MID2-201 ENST00000262843 7333 735aa ENSP00000262843
MID2-202 ENST00000443968 2251 705aa ENSP00000413976
MID2-204 ENST00000474517 689 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
4653Cholesterol1.72200971455582E-617903299

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0003713enables transcription coactivator activity1IDAHomo_sapiens(9606)Function
GO:0005737located_in cytoplasm1IEAHomo_sapiens(9606)Component
GO:0005874colocalizes_with microtubule3IBA,IDAHomo_sapiens(9606)Component
GO:0008017enables microtubule binding2IBA,IMPHomo_sapiens(9606)Function
GO:0008270enables zinc ion binding1IEAHomo_sapiens(9606)Function
GO:0010508involved_in positive regulation of autophagy1IMPHomo_sapiens(9606)Process
GO:0016567involved_in protein ubiquitination1IEAHomo_sapiens(9606)Process
GO:0016740enables transferase activity1IEAHomo_sapiens(9606)Function
GO:0019899enables enzyme binding1IPIHomo_sapiens(9606)Function
GO:0032897involved_in negative regulation of viral transcription1IDAHomo_sapiens(9606)Process
GO:0035372involved_in protein localization to microtubule2IBA,IMPHomo_sapiens(9606)Process
GO:0042803enables protein homodimerization activity1IDAHomo_sapiens(9606)Function
GO:0043123involved_in positive regulation of I-kappaB kinase/NF-kappaB signaling1IDAHomo_sapiens(9606)Process
GO:0044790involved_in suppression of viral release by host1IDAHomo_sapiens(9606)Process
GO:0045087involved_in innate immune response1IDAHomo_sapiens(9606)Process
GO:0045893involved_in positive regulation of DNA-templated transcription1IEAHomo_sapiens(9606)Process
GO:0046597involved_in negative regulation of viral entry into host cell1IDAHomo_sapiens(9606)Process
GO:0051091involved_in positive regulation of DNA-binding transcription factor activity1IMPHomo_sapiens(9606)Process
GO:0051092involved_in positive regulation of NF-kappaB transcription factor activity1IMPHomo_sapiens(9606)Process
GO:0051219enables phosphoprotein binding1IPIHomo_sapiens(9606)Function
GO:0070062located_in extracellular exosome1HDAHomo_sapiens(9606)Component

Expression