Functions and Diseases

RBP Type Canonical_RBPs
Diseases Disease
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions Transmemebrane
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000072682 Gene ID 8974 Accession 8547
Symbol P4HA2 Alias MYP25;lncRNA-PE Full Name prolyl 4-hydroxylase subunit alpha 2
Status Confidence Length 105125 bases Strand Minus strand
Position 5 : 132190147 - 132295271 RNA binding domain 2OG-FeII_Oxy
Summary This gene encodes a component of prolyl 4-hydroxylase, a key enzyme in collagen synthesis composed of two identical alpha subunits and two beta subunits. The encoded protein is one of several different types of alpha subunits and provides the major part of the catalytic site of the active enzyme. In collagen and related proteins, prolyl 4-hydroxylase catalyzes the formation of 4-hydroxyproline that is essential to the proper three-dimensional folding of newly synthesized procollagen chains. Alternatively spliced transcript variants encoding different isoforms have been described. [provided by RefSeq, Jul 2008]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000166534 2OG-FeII_Oxy PF03171 2.3e-05 1
ENSP00000368398 2OG-FeII_Oxy PF03171 2.3e-05 1
ENSP00000384999 2OG-FeII_Oxy PF03171 2.3e-05 1
ENSP00000353772 2OG-FeII_Oxy PF03171 2.9e-05 1
ENSP00000368379 2OG-FeII_Oxy PF03171 2.9e-05 1
ENSP00000368394 2OG-FeII_Oxy PF03171 2.9e-05 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal
31278071 Aspirin targets P4HA2 through inhibiting NF-κB and LMCD1-AS1/let-7g to inhibit tumour growth and collagen deposition in hepatocellular carcinoma. Tianjiao Wang 2019-07-01 EBioMedicine

Transcripts

Name Transcript ID bp Protein Translation ID
P4HA2-202 ENST00000360568 4547 533aa ENSP00000353772
P4HA2-205 ENST00000379104 4553 535aa ENSP00000368398
P4HA2-207 ENST00000401867 3349 535aa ENSP00000384999
P4HA2-203 ENST00000379086 2223 533aa ENSP00000368379
P4HA2-201 ENST00000166534 2230 535aa ENSP00000166534
P4HA2-204 ENST00000379100 2625 533aa ENSP00000368394
P4HA2-218 ENST00000474628 743 No protein -
P4HA2-211 ENST00000428369 2397 146aa ENSP00000396495
P4HA2-221 ENST00000506807 463 No protein -
P4HA2-216 ENST00000467587 456 No protein -
P4HA2-209 ENST00000417528 1023 204aa ENSP00000389523
P4HA2-213 ENST00000431054 724 236aa ENSP00000391257
P4HA2-214 ENST00000439698 866 184aa ENSP00000405406
P4HA2-206 ENST00000395164 568 167aa ENSP00000378593
P4HA2-215 ENST00000453286 819 153aa ENSP00000413542
P4HA2-210 ENST00000418055 568 114aa ENSP00000403883
P4HA2-219 ENST00000478055 929 No protein -
P4HA2-208 ENST00000416053 582 101aa ENSP00000394953
P4HA2-212 ENST00000428841 427 50aa ENSP00000395956
P4HA2-217 ENST00000471826 2508 No protein -
P4HA2-220 ENST00000481636 496 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
8566Blood Pressure2.3369131189499E-517903302
8581Blood Pressure4.2951713158379E-517903302
8963Blood Pressure4.0782724970212E-517903302
8974Blood Pressure8.28509725157023E-517903302
59732Blood Pressure9.7798852E-006-
60319Blood Pressure7.8124131E-006-
105212Giant Cell Arteritis5E-928041642

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0004656enables procollagen-proline 4-dioxygenase activity2IBA,IDAHomo_sapiens(9606)Function
GO:0005506enables iron ion binding1IEAHomo_sapiens(9606)Function
GO:0005654located_in nucleoplasm1IDAHomo_sapiens(9606)Component
GO:0005783is_active_in endoplasmic reticulum2IBA,IDAHomo_sapiens(9606)Component
GO:0005788located_in endoplasmic reticulum lumen1TASHomo_sapiens(9606)Component
GO:0005829located_in cytosol1IDAHomo_sapiens(9606)Component
GO:0009055enables electron transfer activity1TASHomo_sapiens(9606)Function
GO:0018401involved_in peptidyl-proline hydroxylation to 4-hydroxy-L-proline1IBAHomo_sapiens(9606)Process
GO:0022900involved_in electron transport chain1IEAHomo_sapiens(9606)Process
GO:0031418enables L-ascorbic acid binding1IEAHomo_sapiens(9606)Function
GO:0043231located_in intracellular membrane-bounded organelle1IDAHomo_sapiens(9606)Component

Expression