RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Functions and Diseases

RBP Type	Canonical_RBPs
Diseases	N.A.
Drug	N.A.
Main interacting RNAs	N.A.
Moonlighting functions	TF
Localizations	Nucleoli
BulkPerturb-seq

Description

Ensembl ID	ENSG00000063587	Gene ID	10838	Accession	13069
Symbol	ZNF275	Alias	NA	Full Name	zinc finger protein 275
Status	Confidence	Length	18780 bases	Strand	Plus strand
Position	X : 153334147 - 153352926	RNA binding domain	zf-met
Summary	This gene encodes a zinc finger protein that appears to be conserved in eutheria. Its function has not yet been established. [provided by RefSeq, Jul 2010]

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSP00000359269	zf-met	PF12874	1.2e-07	1
ENSP00000359271	zf-met	PF12874	1.4e-05	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
ZNF275-201	ENST00000370249	6305	376aa	ENSP00000359269
ZNF275-205	ENST00000650114	6420	429aa	ENSP00000496975
ZNF275-204	ENST00000647705	5920	No protein	-
ZNF275-203	ENST00000438239	591	No protein	-
ZNF275-202	ENST00000370251	6320	329aa	ENSP00000359271

Gene Model

Click here to download ENSG00000063587's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID
7479	Thyrotropin	6.55183728091036E-5	17903292
7503	Thyrotropin	4.86540771444943E-5	17903292
10059	Exercise Test	3.72348892492269E-5	17903301

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSG00000063587's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category
GO:0000978	enables RNA polymerase II cis-regulatory region sequence-specific DNA binding	1	IBA	Homo_sapiens(9606)	Function
GO:0000981	enables DNA-binding transcription factor activity, RNA polymerase II-specific	1	IBA	Homo_sapiens(9606)	Function
GO:0005515	enables protein binding	1	IPI	Homo_sapiens(9606)	Function
GO:0005634	located_in nucleus	1	IEA	Homo_sapiens(9606)	Component
GO:0006357	involved_in regulation of transcription by RNA polymerase II	1	IBA	Homo_sapiens(9606)	Process
GO:0046872	enables metal ion binding	1	IEA	Homo_sapiens(9606)	Function

Expression