Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases Disease
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions Metabolic enzyme
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000058804 Gene ID 55706 Accession 25525
Symbol NDC1 Alias Full Name
Status Confidence Length 72819 bases Strand Minus strand
Position 1 : 53765478 - 53838296 RNA binding domain N.A.
Summary

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
NDC1-201 ENST00000371429 4552 674aa ENSP00000360483
NDC1-202 ENST00000480952 785 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
100573Antidepressive Agents2E-627622933
100574Depressive Disorder2E-627622933
100575Mood Disorders2E-627622933

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0005635located_in nuclear envelope2IDA,TASHomo_sapiens(9606)Component
GO:0005643part_of nuclear pore2IDA,NASHomo_sapiens(9606)Component
GO:0005737located_in cytoplasm1IEAHomo_sapiens(9606)Component
GO:0005886located_in plasma membrane1IDAHomo_sapiens(9606)Component
GO:0006913involved_in nucleocytoplasmic transport1NASHomo_sapiens(9606)Process
GO:0006999involved_in nuclear pore organization1IBAHomo_sapiens(9606)Process
GO:0007129involved_in homologous chromosome pairing at meiosis1IEAHomo_sapiens(9606)Process
GO:0007283involved_in spermatogenesis1IEAHomo_sapiens(9606)Process
GO:0015031involved_in protein transport1NASHomo_sapiens(9606)Process
GO:0015629located_in actin cytoskeleton1IDAHomo_sapiens(9606)Component
GO:0016020located_in membrane1HDAHomo_sapiens(9606)Component
GO:0017056enables structural constituent of nuclear pore1IMPHomo_sapiens(9606)Function
GO:0030674enables protein-macromolecule adaptor activity1IBAHomo_sapiens(9606)Function
GO:0031965located_in nuclear membrane1IDAHomo_sapiens(9606)Component
GO:0051028involved_in mRNA transport1IEAHomo_sapiens(9606)Process
GO:0051292involved_in nuclear pore complex assembly1IMPHomo_sapiens(9606)Process
GO:0051664involved_in nuclear pore localization1IMPHomo_sapiens(9606)Process
GO:0070762part_of nuclear pore transmembrane ring1IBAHomo_sapiens(9606)Component

Expression