Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions N.A.
Localizations Stress granucle
BulkPerturb-seq

Description

Ensembl ID ENSG00000025800 Gene ID 23633 Accession 6399
Symbol KPNA6 Alias IPOA7 Full Name karyopherin subunit alpha 6
Status Confidence Length 68508 bases Strand Plus strand
Position 1 : 32108056 - 32176563 RNA binding domain N.A.
Summary Nucleocytoplasmic transport, a signal- and energy-dependent process, takes place through nuclear pore complexes embedded in the nuclear envelope. The import of proteins containing a nuclear localization signal (NLS) requires the NLS import receptor, a heterodimer of importin alpha and beta subunits also known as karyopherins. Importin alpha binds the NLS-containing cargo in the cytoplasm and importin beta docks the complex at the cytoplasmic side of the nuclear pore complex. In the presence of nucleoside triphosphates and the small GTP binding protein Ran, the complex moves into the nuclear pore complex and the importin subunits dissociate. Importin alpha enters the nucleoplasm with its passenger protein and importin beta remains at the pore. The protein encoded by this gene is a member of the importin alpha family. [provided by RefSeq, Jul 2008]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
KPNA6-201 ENST00000373625 7355 536aa ENSP00000362728
KPNA6-204 ENST00000471599 3941 186aa ENSP00000474234
KPNA6-203 ENST00000469790 879 No protein -
KPNA6-202 ENST00000446515 965 321aa ENSP00000415677

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005634is_active_in nucleus1IBAHomo_sapiens(9606)Component
GO:0005654is_active_in nucleoplasm3IBA,NAS,TASHomo_sapiens(9606)Component
GO:0005829located_in cytosol2NAS,TASHomo_sapiens(9606)Component
GO:0006366involved_in transcription by RNA polymerase II1IEAHomo_sapiens(9606)Process
GO:0006606involved_in protein import into nucleus1ISSHomo_sapiens(9606)Process
GO:0006607involved_in NLS-bearing protein import into nucleus1IBAHomo_sapiens(9606)Process
GO:0008139enables nuclear localization sequence binding1IBAHomo_sapiens(9606)Function
GO:0016020located_in membrane1HDAHomo_sapiens(9606)Component
GO:0019079involved_in viral genome replication1IEAHomo_sapiens(9606)Process
GO:0042564part_of NLS-dependent protein nuclear import complex1IPIHomo_sapiens(9606)Component
GO:0043657located_in host cell1IEAHomo_sapiens(9606)Component
GO:0045944involved_in positive regulation of transcription by RNA polymerase II1IEAHomo_sapiens(9606)Process
GO:0060135involved_in maternal process involved in female pregnancy1IEAHomo_sapiens(9606)Process
GO:0061608enables nuclear import signal receptor activity1IBAHomo_sapiens(9606)Function
GO:0075506acts_upstream_of_or_within entry of viral genome into host nucleus through nuclear pore complex via importin1IMPHomo_sapiens(9606)Process
GO:1900017involved_in positive regulation of cytokine production involved in inflammatory response1IEAHomo_sapiens(9606)Process
GO:1903902acts_upstream_of_or_within positive regulation of viral life cycle1IMPHomo_sapiens(9606)Process

Expression