RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	scaffold_900036.1	Gene ID		Accession	-
Symbol		Alias	-	Full Name
Status	Confidence	Length		Strand
Position		RNA binding domain	Ribosomal_S7
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	scaffold_900036.1	1560	155aa	scaffold_900036.1

Gene Model

Click here to download scaffold_900036.1's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download scaffold_900036.1's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
scaffold_900036.1	arabidopsis_lyrata	scaffold_703398.1	100	99.3548	arabidopsis_lyrata	scaffold_900036.1	100	99.3548
scaffold_900036.1	arabidopsis_lyrata	scaffold_201137.1	100	100	arabidopsis_lyrata	scaffold_900036.1	100	100
scaffold_900036.1	arabidopsis_lyrata	scaffold_104084.1	100	100	arabidopsis_lyrata	scaffold_900036.1	100	100
scaffold_900036.1	arabidopsis_lyrata	fgenesh2_kg.3__1244__AT3G11940.2	38.6473	21.7391	arabidopsis_lyrata	scaffold_900036.1	51.6129	29.0323
scaffold_900036.1	arabidopsis_lyrata	fgenesh2_kg.4__1779__AT2G37270.2	38.6473	22.2222	arabidopsis_lyrata	scaffold_900036.1	51.6129	29.6774

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	74.8387	56.7742	chondrus_crispus	CCP38109	74.359	56.4103
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	79.3548	74.8387	papaver_somniferum	RZC68910	58.8517	55.5024
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	100	100	papaver_somniferum	RZC64141	100	100
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	94.8387	92.9032	papaver_somniferum	RZC81249	94.8387	92.9032
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	70.3226	64.5161	papaver_somniferum	RZC65734	78.9855	72.4638
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	83.2258	79.3548	papaver_somniferum	RZC75422	97.7273	93.1818
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	99.3548	97.4194	papaver_somniferum	RZC69720	99.3548	97.4194
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	96.7742	96.7742	papaver_somniferum	RZC68929	96.7742	96.7742
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	98.7097	97.4194	papaver_somniferum	RZC83508	97.4522	96.1783
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	100	100	papaver_somniferum	RZC70922	100	100
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	74.1936	73.5484	papaver_somniferum	RZC65339	96.6387	95.7983
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	98.0645	97.4194	papaver_somniferum	RZC45461	98.0645	97.4194
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	96.129	94.8387	papaver_somniferum	RZC45457	96.129	94.8387
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	99.3548	97.4194	beta_vulgaris	KMT11517	99.3548	97.4194
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	41.2903	21.9355	cucumis_melo	MELO3C015621.2.1	49.6124	26.3566
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	98.0645	97.4194	cucumis_sativus	KGN56684	98.0645	97.4194
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	98.7097	97.4194	populus_trichocarpa	Potri.013G138900.1.v4.1	98.7097	97.4194
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	100	100	arabidopsis_thaliana	ATCG01240.1	100	100
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	98.7097	98.0645	prunus_dulcis	VVA33323	98.7097	98.0645
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	100	100	brassica_napus	CDX95213	100	100
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	100	100	brassica_napus	CDY45545	100	100
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	100	100	brassica_napus	CDY19673	100	100
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	63.2258	62.5806	prunus_persica	ONI13884	97.0297	96.0396
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	84.5161	83.871	brassica_juncea	cds.BjuB06g28180S	100	99.2366
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	97.4194	97.4194	brassica_juncea	cds.BjuUnng02640S	68.9498	68.9498
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	93.5484	93.5484	brassica_juncea	cds.BjuB06g28240S	57.5397	57.5397
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	100	98.0645	cajanus_cajan	C.cajan_32781.t.cds1	100	98.0645
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	100	98.0645	cajanus_cajan	C.cajan_38746.t.cds1	100	98.0645
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	97.4194	95.4839	lupinus_angustifolius	OIV95592	78.2383	76.6839
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	72.2581	65.1613	phaseolus_vulgaris	ESW34120	88.189	79.5276
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	54.8387	50.3226	medicago_truncatula	AES91011	55.9211	51.3158
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	52.2581	50.9677	pisum_sativum	Psat5g119080.1.cds1	88.0435	85.8696
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	69.6774	68.3871	vigna_unguiculata	VigunL004400.1.v1.2.CDS.1	99.0826	97.2477
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	99.3548	97.4194	vigna_unguiculata	VigunL031300.1.v1.2.CDS.1	99.3548	97.4194
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	99.3548	97.4194	vigna_unguiculata	VigunL012300.2.v1.2.CDS.1	89.0173	87.2832
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	94.8387	90.3226	vigna_unguiculata	VigunL079050.1.v1.2	49	46.6667
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	99.3548	97.4194	vigna_unguiculata	Vigun11g070700.2.v1.2.CDS.1	89.0173	87.2832
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	98.0645	95.4839	vigna_unguiculata	Vigun09g023900.2.v1.2.CDS.1	87.8613	85.5491
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	93.5484	90.3226	vigna_unguiculata	Vigun05g129800.1.v1.2.CDS.1	93.5484	90.3226
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	96.129	93.5484	vigna_unguiculata	Vigun05g156800.1.v1.2.CDS.1	96.129	93.5484
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	97.4194	95.4839	vigna_unguiculata	VigunL082732.1.v1.2.CDS.1	87.2832	85.5491
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	99.3548	97.4194	vigna_unguiculata	Vigun03g201401.1.v1.2.CDS.1	89.0173	87.2832
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	99.3548	97.4194	vigna_unguiculata	VigunL046332.1.v1.2.CDS.1	99.3548	97.4194
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	54.1936	45.8064	solanum_lycopersicum	Solyc09g061450.1.1	64.1221	54.1985
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	72.9032	63.2258	solanum_lycopersicum	Solyc01g017400.2.1	57.6531	50
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	80.6452	76.7742	manihot_esculenta	OAY24511	92.5926	88.1481
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	86.4516	83.871	capsicum_annuum	PHT83575	87.013	84.4156
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	98.7097	97.4194	capsicum_annuum	PHT74391	98.7097	97.4194
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	98.7097	97.4194	capsicum_annuum	PHT74397	98.7097	97.4194
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	97.4194	94.1936	capsicum_annuum	PHT76065	97.4194	94.1936
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	98.7097	97.4194	capsicum_annuum	PHT92790	98.7097	97.4194
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	94.1936	91.6129	capsicum_annuum	PHT74811	94.1936	91.6129
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	91.6129	90.3226	solanum_tuberosum	PGSC0003DMT400030854	97.931	96.5517
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	83.2258	82.5806	solanum_tuberosum	PGSC0003DMT400088629	98.4733	97.7099
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	60.6452	53.5484	lactuca_sativa	cds-PLY79264.1	49.7355	43.9153
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	68.3871	65.8064	lactuca_sativa	cds-PLY68372.1	84.8	81.6
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	53.5484	50.3226	helianthus_annuus	CDS:HanXRQr2_Chr03g0090611.1	87.3684	82.1053
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	60	54.1936	helianthus_annuus	CDS:HanXRQr2_Chr16g0747131.1	75.6098	68.2927
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.871	avena_sativa_sang	AVESA.00010b.r2.UnG1470960.1.CDS.1	89.7436	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	74.8387	69.6774	avena_sativa_sang	AVESA.00010b.r2.UnG1522290.1.CDS.1	87.8788	81.8182
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	88.3871	80.6452	avena_sativa_sang	AVESA.00010b.r2.UnG1487150.1.CDS.1	87.8205	80.1282
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.2258	avena_sativa_sang	AVESA.00010b.r2.UnG1513470.1.CDS.1	90.3846	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	avena_sativa_sang	AVESA.00010b.r2.UnG1518540.1.CDS.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	avena_sativa_sang	AVESA.00010b.r2.UnG1507120.1.CDS.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	70.9677	66.4516	avena_sativa_sang	AVESA.00010b.r2.UnG1501630.1.CDS.1	87.3016	81.746
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	avena_sativa_sang	AVESA.00010b.r2.UnG1486460.1.CDS.1	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	avena_sativa_sang	AVESA.00010b.r2.UnG1508360.1.CDS.1	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.2258	avena_sativa_sang	AVESA.00010b.r2.UnG1497060.1.CDS.1	90.3846	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	75.4839	70.3226	avena_sativa_sang	AVESA.00010b.r2.UnG1521420.1.CDS.1	88.6364	82.5758
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.6774	82.5806	avena_sativa_sang	AVESA.00010b.r2.UnG1414420.1.CDS.1	89.1026	82.0513
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	avena_sativa_sang	AVESA.00010b.r2.UnG1480510.1.CDS.1	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	avena_sativa_sang	AVESA.00010b.r2.UnG1511640.1.CDS.1	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	avena_sativa_sang	AVESA.00010b.r2.UnG1479160.1.CDS.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	avena_sativa_sang	AVESA.00010b.r2.UnG1487210.1.CDS.1	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	71.6129	67.0968	avena_sativa_sang	AVESA.00010b.r2.UnG1480930.1.CDS.1	88.0952	82.5397
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	avena_sativa_sang	AVESA.00010b.r2.UnG1516190.1.CDS.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	71.6129	66.4516	avena_sativa_sang	AVESA.00010b.r2.UnG1497190.1.CDS.1	88.0952	81.746
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	87.0968	78.7097	avena_sativa_sang	AVESA.00010b.r2.UnG1498420.1.CDS	88.8158	80.2632
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.6774	81.9355	avena_sativa_sang	AVESA.00010b.r2.4DG0722010.1.CDS.1	89.1026	81.4103
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	75.4839	69.6774	avena_sativa_sang	AVESA.00010b.r2.UnG1495730.1.CDS.1	88.6364	81.8182
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	76.129	70.9677	avena_sativa_sang	AVESA.00010b.r2.UnG1475120.1.CDS.1	89.3939	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.2258	avena_sativa_sang	AVESA.00010b.r2.UnG1489220.1.CDS.1	90.3846	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.2258	avena_sativa_sang	AVESA.00010b.r2.UnG1519390.1.CDS.1	90.3846	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.2258	avena_sativa_sang	AVESA.00010b.r2.UnG1478440.1.CDS.1	90.3846	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	avena_sativa_sang	AVESA.00010b.r2.UnG1498220.1.CDS.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	avena_sativa_sang	AVESA.00010b.r2.UnG1466120.1.CDS.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	avena_sativa_sang	AVESA.00010b.r2.UnG1508870.1.CDS.1	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.6774	81.9355	avena_sativa_sang	AVESA.00010b.r2.UnG1462920.1.CDS.1	89.1026	81.4103
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	avena_sativa_sang	AVESA.00010b.r2.UnG1499220.1.CDS.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	avena_sativa_sang	AVESA.00010b.r2.UnG1465360.1.CDS.1	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.2258	avena_sativa_sang	AVESA.00010b.r2.UnG1507530.1.CDS.1	90.3846	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	74.8387	69.6774	avena_sativa_sang	AVESA.00010b.r2.UnG1505400.1.CDS.1	87.8788	81.8182
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	avena_sativa_sang	AVESA.00010b.r2.UnG1475960.1.CDS.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.0323	80.6452	avena_sativa_sang	AVESA.00010b.r2.3AG0439320.1.CDS.1	88.4615	80.1282
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	75.4839	70.3226	avena_sativa_sang	AVESA.00010b.r2.UnG1464460.1.CDS.1	88.6364	82.5758
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.2258	avena_sativa_sang	AVESA.00010b.r2.UnG1514610.1.CDS.1	90.3846	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	avena_sativa_sang	AVESA.00010b.r2.4DG0721880.1.CDS.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.0323	81.2903	avena_sativa_sang	AVESA.00010b.r2.6CG1144170.1.CDS.1	88.4615	80.7692
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	75.4839	69.6774	avena_sativa_sang	AVESA.00010b.r2.UnG1485560.1.CDS.1	88.6364	81.8182
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.2258	avena_sativa_sang	AVESA.00010b.r2.UnG1475560.1.CDS.1	90.3846	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	78.0645	70.3226	avena_sativa_sang	AVESA.00010b.r2.6AG1042680.1.CDS.1	81.2081	73.1544
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	avena_sativa_sang	AVESA.00010b.r2.7CG0694390.1.CDS.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	avena_sativa_sang	AVESA.00010b.r2.UnG1469910.1.CDS.1	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	avena_sativa_sang	AVESA.00010b.r2.UnG1519000.1.CDS.1	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	avena_sativa_sang	AVESA.00010b.r2.UnG1514000.1.CDS.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	avena_sativa_sang	AVESA.00010b.r2.UnG1519230.1.CDS.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	avena_sativa_sang	AVESA.00010b.r2.UnG1475940.1.CDS.1	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	avena_sativa_ot3098	cds.AVESA.00001b.r3.Ung0000615.1	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	avena_sativa_ot3098	cds.AVESA.00001b.r3.4Cg0000658.3	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	avena_sativa_ot3098	cds.AVESA.00001b.r3.Ung0000523.3	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	avena_sativa_ot3098	cds.AVESA.00001b.r3.Ung0000610.2	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	avena_sativa_ot3098	cds.AVESA.00001b.r3.Ung0000555.1	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	avena_sativa_ot3098	cds.AVESA.00001b.r3.Ung0000586.1	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	avena_sativa_ot3098	cds.AVESA.00001b.r3.Ung0000574.2	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	avena_sativa_ot3098	cds.AVESA.00001b.r3.Ung0000529.1	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	oryza_glaberrima	ORGLA11G0195600.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	oryza_glaberrima	ORGLA03G0395400.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	oryza_glaberrima	ORGLA06G0262200.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	oryza_glaberrima	ORGLA10G0158500.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	88.3871	80.6452	oryza_glaberrima	ORGLA04G0075200.1	87.8205	80.1282
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	oryza_glaberrima	ORGLA10G0164300.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	oryza_glaberrima	ORGLA06G0268100.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	oryza_glaberrima	ORGLA11G0169800.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	oryza_glaberrima	ORGLA08G0207200.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	oryza_glaberrima	ORGLA06G0206700.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	82.5806	secale_cereale	SECCE7Rv1G0487530.1.CDS.1	89.7436	82.0513
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	87.7419	80.6452	secale_cereale	SECCE4Rv1G0240680.1.CDS.1	87.1795	80.1282
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	secale_cereale	SECCEUnv1G0553990.1.CDS.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	secale_cereale	SECCE7Rv1G0523420.1.CDS.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.2258	secale_cereale	SECCE5Rv1G0315380.1.CDS.1	90.3846	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	secale_cereale	SECCEUnv1G0541500.1.CDS.1	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	82.5806	secale_cereale	SECCE5Rv1G0334250.1.CDS.1	89.7436	82.0513
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	81.2903	74.8387	secale_cereale	SECCE4Rv1G0241140.1	86.8966	80
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	setaria_viridis	TKV90882	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	85.8064	78.7097	triticum_urartu	TuG1812S0003443300.01.T01	84.7134	77.707
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	74.1936	68.3871	zea_mays	Zm00001eb009520_P001	87.1212	80.303
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	zea_mays	Zm00001eb437740_P001	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	zea_mays	Zm00001eb435130_P001	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	zea_mays	Zm00001eb442130_P001	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	zea_mays	Zm00001eb437080_P001	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	82.5806	zea_mays	Zm00001eb412340_P001	89.7436	82.0513
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	82.5806	73.5484	triticum_turgidum	TRITD7Av1G134510.2	82.0513	73.0769
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	82.5806	76.7742	triticum_turgidum	TRITD4Bv1G144210.1	92.0863	85.6115
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	88.3871	82.5806	triticum_turgidum	TRITD4Bv1G070470.2	87.8205	82.0513
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	52.9032	49.6774	triticum_turgidum	TRITD4Av1G093870.1	90.1099	84.6154
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	79.3548	72.2581	triticum_turgidum	TRITD3Av1G245850.1	88.4892	80.5755
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	triticum_turgidum	TRITD0Uv1G129900.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.0323	81.9355	triticum_turgidum	TRITD3Bv1G076060.2	88.4615	81.4103
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	61.9355	58.0645	triticum_turgidum	TRITD6Bv1G190970.1	88.0734	82.5688
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.6774	81.9355	triticum_turgidum	TRITD6Av1G035700.2	89.1026	81.4103
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	84.5161	76.129	triticum_turgidum	TRITD2Bv1G099680.2	83.9744	75.641
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.871	triticum_turgidum	TRITD0Uv1G135620.1	89.7436	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.0323	82.5806	triticum_aestivum	TraesCS3B02G013500.1.cds1	88.4615	82.0513
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	81.9355	76.7742	triticum_aestivum	TraesCS4B02G238600.1	91.3669	85.6115
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	83.871	75.4839	triticum_aestivum	TraesCSU02G149800.1	84.4156	75.974
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	triticum_aestivum	TraesCSU02G238000.1.cds1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	84.5161	76.129	triticum_aestivum	TraesCS2B02G252700.1.cds1	83.9744	75.641
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.6774	82.5806	triticum_aestivum	TraesCS1A02G157100.1.cds1	87.9747	81.0127
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.6774	81.9355	triticum_aestivum	TraesCS6A02G114400.1.cds1	89.1026	81.4103
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.0323	81.2903	triticum_aestivum	TraesCS1B02G406600.1	89.0323	81.2903
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	triticum_aestivum	TraesCSU02G238400.1.cds1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	78.0645	69.6774	triticum_aestivum	TraesCS4D02G155300.1.cds1	87.0504	77.6978
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	triticum_aestivum	TraesCS5D02G457500.1.cds1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.0323	82.5806	triticum_aestivum	TraesCS4B02G146200.1.cds1	88.4615	82.0513
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	88.3871	81.2903	triticum_aestivum	TraesCS1D02G179100.1.cds1	87.8205	80.7692
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	triticum_aestivum	TraesCS2B02G314400.1.cds1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	triticum_aestivum	TraesCSU02G259500.1.cds1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	88.3871	80	triticum_aestivum	TraesCS4A02G024600.1	88.961	80.5195
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.0323	82.5806	triticum_aestivum	TraesCSU02G158100.1.cds1	88.4615	82.0513
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.6774	82.5806	triticum_aestivum	TraesCSU02G157000.1.cds1	89.1026	82.0513
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.0323	81.9355	triticum_aestivum	TraesCS3B02G187900.1.cds1	88.4615	81.4103
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	69.0323	64.5161	triticum_aestivum	TraesCS6B02G357300.1.cds1	84.9206	79.3651
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.6774	81.2903	triticum_aestivum	TraesCS6D02G375300.1.cds1	89.1026	80.7692
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	82.5806	75.4839	triticum_aestivum	TraesCS4A02G156100.1	82.5806	75.4839
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.6774	82.5806	triticum_aestivum	TraesCSU02G190200.1.cds1	89.1026	82.0513
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	40.6452	23.2258	caenorhabditis_elegans	Y57G11C.34.1	28.3784	16.2162
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.6774	81.9355	sorghum_bicolor	EES09873	89.1026	81.4103
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	40	24.5161	homo_sapiens	ENSP00000245539	25.6198	15.7025
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	84.5161	83.871	amborella_trichopoda	ERM95250	100	99.2366
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	46.4516	27.7419	drosophila_melanogaster	FBpp0304503	33.0275	19.7248
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	87.0968	79.3548	brachypodium_distachyon	PNT63586	86.5385	78.8462
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	49.0323	46.4516	brachypodium_distachyon	PNT65083	86.3636	81.8182
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	81.9355	74.8387	brachypodium_distachyon	KQJ89171	89.4366	81.6901
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	brachypodium_distachyon	KQK18210	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	brachypodium_distachyon	PNT67428	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	brachypodium_distachyon	KQJ88318	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.6774	82.5806	brachypodium_distachyon	KQK12735	89.1026	82.0513
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	oryza_sativa	cds-CAA33919.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	oryza_sativa	cds-CAA33942.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	56.7742	55.4839	gossypium_raimondii	KJB82782	97.7778	95.5556
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	48.3871	44.5161	gossypium_raimondii	KJB23822	91.4634	84.1463
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	56.129	50.9677	gossypium_raimondii	KJB72705	82.8571	75.2381
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	49.0323	49.0323	gossypium_raimondii	KJB11651	95	95
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	38.7097	23.871	ciona_savignyi	ENSCSAVP00000011120	26.3158	16.2281
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	99.3548	98.0645	fraxinus_excelsior	FRAEX38873_v2_000016390.1.cds1	99.3548	98.0645
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	99.3548	98.0645	fraxinus_excelsior	FRAEX38873_v2_000394960.1.cds1	99.3548	98.0645
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	99.3548	98.0645	fraxinus_excelsior	FRAEX38873_v2_000196470.1.cds1	99.3548	98.0645
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	99.3548	98.0645	fraxinus_excelsior	FRAEX38873_v2_000400760.1.cds1	99.3548	98.0645
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	99.3548	98.0645	fraxinus_excelsior	FRAEX38873_v2_000277080.1.cds1	99.3548	98.0645
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	99.3548	98.0645	fraxinus_excelsior	FRAEX38873_v2_000376930.1.cds1	99.3548	98.0645
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	99.3548	98.0645	fraxinus_excelsior	FRAEX38873_v2_000400670.1.cds1	99.3548	98.0645
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	99.3548	98.0645	fraxinus_excelsior	FRAEX38873_v2_000285740.1.cds1	99.3548	98.0645
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	80	78.7097	cynara_cardunculus	KVH87776	94.6565	93.1298
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	46.4516	44.5161	pistacia_vera	cds-EVM0005960.1	71.2871	68.3168
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	63.2258	58.7097	eucalyptus_grandis	KCW48181	82.3529	76.4706
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	100	99.3548	eucalyptus_grandis	KCW58507	100	99.3548
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	66.4516	47.7419	galdieria_sulphuraria	EME28485	78.0303	56.0606
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	100	100	eutrema_salsugineum	ESQ30845	100	100
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	35.4839	16.7742	saccharomyces_cerevisiae	YJR113C	22.2672	10.5263
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	99.3548	98.7097	dioscorea_rotundata	DRNTG_01750.1.cds1	99.3548	98.7097
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	100	100	brassica_oleracea	Bo5g140130.1	100	100
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	100	100	brassica_oleracea	Bo7g104980.1	100	100
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	97.4194	96.129	brassica_oleracea	Bo9g056110.1	97.4194	96.129
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	99.3548	98.7097	quercus_lobata	QL93p0823_0003:mrna:CDS:1	99.3548	98.7097
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	88.3871	86.4516	kalanchoe_fedtschenkoi	Kaladp0008s0455.1.v1.1.CDS.1	96.4789	94.3662
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	70.9677	46.4516	cyanidioschyzon_merolae	CMV190CT	74.3243	48.6486
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	85.1613	triticum_dicoccoides	TRIDC3BG005820.1	90.3846	84.6154
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.2258	triticum_dicoccoides	TRIDC7AG059810.1	90.3846	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.0323	81.9355	triticum_dicoccoides	TRIDC1BG011840.1	88.4615	81.4103
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	41.2903	38.7097	triticum_dicoccoides	TRIDC5BG067790.1	88.8889	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	72.9032	67.7419	triticum_dicoccoides	TRIDC6BG057310.1	85.6061	79.5455
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	triticum_dicoccoides	TRIDC6BG049930.1	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	58.0645	54.1936	triticum_dicoccoides	TRIDC7AG039770.1	81.8182	76.3636
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.871	triticum_dicoccoides	TRIDC4BG041960.1	89.7436	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	83.871	75.4839	triticum_dicoccoides	TRIDC2BG035370.1	83.3333	75
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	84.5161	triticum_dicoccoides	TRIDC3BG017130.1	90.3846	83.9744
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.871	triticum_dicoccoides	TRIDC5AG060100.1	89.7436	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.6774	81.9355	triticum_dicoccoides	TRIDC6AG015060.1	89.1026	81.4103
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.3226	83.2258	triticum_dicoccoides	TRIDC6AG019700.1	89.7436	82.6923
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	84.5161	76.129	triticum_dicoccoides	TRIDC7AG060750.1	83.4395	75.1592
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.0323	82.5806	triticum_dicoccoides	TRIDC4BG024110.1	88.4615	82.0513
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.6774	81.9355	triticum_dicoccoides	TRIDC5BG079340.1	89.1026	81.4103
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	52.2581	50.9677	daucus_carota	KZN01727	96.4286	94.0476
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	100	100	camelina_sativa	Csa07g001840.1.cds1	100	100
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	76.7742	62.5806	selaginella_moellendorffii	ADH10435	75.7962	61.7834
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	76.129	61.9355	selaginella_moellendorffii	EFJ05010	75.641	61.5385
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	79.3548	73.5484	eragrostis_tef	Et_8B_058626.CDS	89.781	83.2117
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.6774	81.9355	panicum_hallii	PUZ70517	89.1026	81.4103
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	90.9677	83.871	panicum_hallii	PUZ60658	90.3846	83.3333
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	64.5161	60	aegilops_tauschii	AET3Gv20245500.1	86.9565	80.8696
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	59.3548	56.7742	aegilops_tauschii	AET0Gv20073400.1	86.7924	83.0189
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.0323	80.6452	aegilops_tauschii	AET0Gv20050500.2	88.4615	80.1282
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.0323	81.9355	aegilops_tauschii	AET0Gv20057500.2	88.4615	81.4103
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.0323	82.5806	aegilops_tauschii	AET0Gv20104500.2	88.4615	82.0513
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	89.0323	81.9355	aegilops_tauschii	AET7Gv20710000.1	88.4615	81.4103
scaffold_900036.1	arabidopsis_lyrata	scaffold_900036.1	43.871	41.9355	olea_europaea	OE9A033000C1	83.9506	80.2469

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression