| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | scaffold_800672.1 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
|
| Status |
Confidence |
Length |
|
Strand |
|
| Position |
|
RNA binding domain |
Efg1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
scaffold_800672.1 |
511 |
157aa |
scaffold_800672.1 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| scaffold_800672.1 | arabidopsis_lyrata | fgenesh1_pg.C_scaffold_8000515 | 2.33918 | 1.16959 | arabidopsis_lyrata | scaffold_800672.1 | 2.54777 | 1.27389 |
| scaffold_800672.1 | arabidopsis_lyrata | Al_scaffold_0008_612 | 59.3496 | 57.7236 | arabidopsis_lyrata | scaffold_800672.1 | 92.9936 | 90.4459 |
| scaffold_800672.1 | arabidopsis_lyrata | fgenesh2_kg.37__5__AT5G43720.1 | 53.125 | 52.0833 | arabidopsis_lyrata | scaffold_800672.1 | 97.4522 | 95.5414 |
| scaffold_800672.1 | arabidopsis_lyrata | fgenesh2_kg.1__353__AT1G04230.1 | 40.2439 | 34.7561 | arabidopsis_lyrata | scaffold_800672.1 | 84.0764 | 72.6115 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 66.879 | 53.5032 | marchantia_polymorpha | PTQ46773 | 24.5902 | 19.6721 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 66.242 | 50.3185 | papaver_somniferum | RZC49009 | 24.6446 | 18.7204 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 77.707 | 66.879 | cannabis_sativa_female | cds.novel_model_6294_5bd9a17a | 33.8889 | 29.1667 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 79.6178 | 69.4268 | ficus_carica | FCD_00009181-RA:cds | 36.9823 | 32.2485 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 73.2484 | 57.9618 | beta_vulgaris | KMT12669 | 36.2776 | 28.7066 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 82.1656 | 68.7898 | cucumis_melo | MELO3C006479.2.1 | 34.8649 | 29.1892 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 82.1656 | 69.4268 | cucumis_sativus | KGN56919 | 38.6228 | 32.6347 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 80.2548 | 68.1529 | populus_trichocarpa | Potri.010G078500.1.v4.1 | 36.4162 | 30.9249 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 81.5287 | 66.879 | populus_trichocarpa | Potri.008G160800.1.v4.1 | 37.5367 | 30.7918 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 82.8026 | 69.4268 | citrullus_lanatus | Cla97C05G085730.1 | 39.2749 | 32.9305 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 95.5414 | 94.2675 | arabidopsis_thaliana | AT5G43720.1 | 45.5927 | 44.9848 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 77.0701 | 64.9682 | prunus_dulcis | VVA33299 | 34.7701 | 29.3103 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 94.2675 | 91.7197 | brassica_napus | CDX94720 | 41.4566 | 40.3361 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 89.172 | 83.4395 | brassica_napus | CDX96896 | 38.7812 | 36.2881 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 60.5096 | 56.6879 | brassica_napus | CDY68503 | 34.9265 | 32.7206 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 93.6306 | 89.8089 | brassica_napus | CDY22337 | 42.2414 | 40.5172 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 78.3439 | 66.242 | malus_domestica_golden | mRNA:MD16G0180700 | 35.5491 | 30.0578 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 80.8917 | 69.4268 | malus_domestica_golden | mRNA:MD13G0179700 | 36.1823 | 31.0541 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 77.0701 | 64.9682 | prunus_persica | ONI26470 | 34.7701 | 29.3103 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 93.6306 | 89.8089 | brassica_juncea | cds.BjuA06g01250S | 42.2414 | 40.5172 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 88.535 | 84.0764 | brassica_juncea | cds.BjuA02g14060S | 38.8268 | 36.8715 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 71.3376 | 57.9618 | cajanus_cajan | C.cajan_07124.t | 32.9412 | 26.7647 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 73.2484 | 57.9618 | glycine_max | KRH34373 | 34.8485 | 27.5758 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 74.5223 | 60.5096 | glycine_max | KRG92432 | 43.0147 | 34.9265 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 73.8854 | 56.6879 | lupinus_angustifolius | OIW07245 | 31.1828 | 23.9247 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 74.5223 | 59.2357 | lupinus_angustifolius | OIW07765 | 32.8652 | 26.1236 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 75.1592 | 61.1465 | phaseolus_vulgaris | ESW15875 | 35.8663 | 29.1793 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 75.1592 | 61.7834 | vigna_angularis | KOM35584 | 34.104 | 28.0347 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 68.1529 | 54.7771 | pisum_sativum | Psat6g114920.1.cds | 29.805 | 23.9554 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 26.1146 | 19.7452 | vigna_radiata | Vradi08g14560.1 | 19.8068 | 14.9758 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 75.1592 | 61.7834 | vigna_unguiculata | Vigun07g170500.1.v1.2 | 35.7576 | 29.3939 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 80.2548 | 68.7898 | solanum_lycopersicum | Solyc09g083270.3.1 | 34.4262 | 29.5082 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 80.8917 | 68.7898 | manihot_esculenta | OAY28037 | 37.3529 | 31.7647 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 81.5287 | 68.1529 | manihot_esculenta | OAY55652 | 37.6471 | 31.4706 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 79.6178 | 67.5159 | capsicum_annuum | PHT85802 | 37.092 | 31.454 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 80.2548 | 68.7898 | solanum_tuberosum | PGSC0003DMT400015608 | 36.3112 | 31.1239 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 78.3439 | 65.6051 | sesamum_indicum | SIN_1021842.t | 35.8601 | 30.0292 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 70.0637 | 59.2357 | lactuca_sativa | cds-PLY97186.1 | 31.25 | 26.4205 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 70.0637 | 60.5096 | helianthus_annuus | mRNA:HanXRQr2_Chr12g0554231 | 32.7381 | 28.2738 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 77.0701 | 62.4204 | ananas_comosus | Aco017398.1.mrna1 | 37.3457 | 30.2469 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 71.3376 | 56.6879 | asparagus_officinalis | ONK67371 | 34.7826 | 27.6398 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 78.3439 | 59.8726 | amborella_trichopoda | ERN01445 | 35.5491 | 27.1676 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 80.8917 | 68.7898 | vitis_vinifera | Vitvi05g00626_P001 | 37.6855 | 32.0475 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 78.3439 | 70.0637 | ipomoea_triloba | itb13g18550.t2 | 36.2832 | 32.4484 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 68.7898 | 50.9554 | physcomitrium_patens | Pp3c2_37690V3.1 | 24.4344 | 18.0995 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 80.8917 | 68.1529 | gossypium_raimondii | KJB34520 | 36.9186 | 31.1047 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 81.5287 | 70.0637 | gossypium_raimondii | KJB72309 | 36.7816 | 31.6092 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 75.7962 | 63.6943 | prunus_avium | Pav_sc0000998.1_g170.1.mk:mrna | 34.1954 | 28.7356 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 78.9809 | 63.6943 | nicotiana_attenuata | OIS98846 | 10.3161 | 8.31947 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 77.0701 | 66.879 | coffea_canephora | CDO99145 | 36.0119 | 31.25 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 81.5287 | 69.4268 | theobroma_cacao | EOY05872 | 35.5556 | 30.2778 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 78.9809 | 67.5159 | fraxinus_excelsior | FRAEX38873_v2_000188260.1.cds | 33.9726 | 29.0411 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 70.0637 | 59.8726 | cynara_cardunculus | KVG61807 | 32.3529 | 27.6471 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 79.6178 | 67.5159 | juglans_regia | cds.Jr12_15190_p1 | 37.4251 | 31.7365 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 79.6178 | 67.5159 | juglans_regia | cds.Jr12_15180_p1 | 37.6506 | 31.9277 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 78.9809 | 68.7898 | pistacia_vera | cds-EVM0000561.1 | 37.0149 | 32.2388 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 91.7197 | 85.9873 | arabis_alpina | KFK31700 | 37.1134 | 34.7938 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 79.6178 | 68.1529 | eucalyptus_grandis | KCW60453 | 37.4251 | 32.0359 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 64.9682 | 49.0446 | chenopodium_quinoa | AUR62040390-RA:cds | 33.6634 | 25.4125 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 80.8917 | 70.7006 | citrus_clementina | ESR33329 | 37.7976 | 33.0357 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 92.9936 | 88.535 | eutrema_salsugineum | ESQ44657 | 44.1088 | 41.994 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 77.0701 | 62.4204 | dioscorea_rotundata | DRNTG_02508.1 | 36.8902 | 29.878 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 78.9809 | 68.7898 | corymbia_citriodora | cds-KAF8016410.1 | 37.2372 | 32.4324 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 75.1592 | 62.4204 | musa_acuminata | Ma08_p20360.1 | 36.646 | 30.4348 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 80.2548 | 70.0637 | rosa_chinensis | PRQ32220 | 37.6119 | 32.8358 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 94.9045 | 91.7197 | brassica_oleracea | Bo7g065670.1 | 41.7367 | 40.3361 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 88.535 | 85.3503 | brassica_oleracea | Bo2g119410.1 | 42.9012 | 41.358 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 78.3439 | 64.9682 | quercus_lobata | QL06p015098:mrna | 36.0704 | 29.912 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 81.5287 | 70.7006 | corchorus_capsularis | OMO54743 | 32.4051 | 28.1013 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 78.3439 | 64.3312 | kalanchoe_fedtschenkoi | Kaladp1006s0016.1.v1.1 | 36.9369 | 30.3303 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 95.5414 | 94.2675 | arabidopsis_halleri | g17562.t1 | 45.5927 | 44.9848 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 55.414 | 35.0318 | ostreococcus_lucimarinus | ABO97201 | 29.3919 | 18.5811 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 66.879 | 56.051 | daucus_carota | KZM83141 | 33.6538 | 28.2051 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 75.7962 | 54.7771 | nymphaea_colorata | NC1G0108060.1:cds | 36.2805 | 26.2195 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 74.5223 | 56.6879 | nymphaea_colorata | NC6G0040340.1:cds | 32.2314 | 24.5179 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 92.9936 | 88.535 | camelina_sativa | Csa18g010150.1 | 44.3769 | 42.2492 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 92.9936 | 87.8981 | camelina_sativa | Csa11g071170.1 | 44.3769 | 41.9453 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 93.6306 | 88.535 | camelina_sativa | Csa20g067650.1 | 44.6809 | 42.2492 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 68.7898 | 49.0446 | selaginella_moellendorffii | EFJ35460 | 31.1239 | 22.1902 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 93.6306 | 89.8089 | brassica_rapa_ro18 | A06p056630.1_BraROA.1 | 42.2414 | 40.5172 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 88.535 | 84.0764 | brassica_rapa_ro18 | A02p040210.1_BraROA.1 | 41.7417 | 39.6396 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 80.2548 | 64.3312 | actinidia_chinensis | PSS01408 | 36.4162 | 29.1908 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 79.6178 | 65.6051 | actinidia_chinensis | PSS15976 | 36.1272 | 29.7688 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 79.6178 | 68.7898 | olea_europaea | OE9A036261C1 | 36.4431 | 31.4869 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 79.6178 | 68.7898 | olea_europaea | OE9A084799C2 | 36.4431 | 31.4869 |
| scaffold_800672.1 | arabidopsis_lyrata | scaffold_800672.1 | 78.9809 | 65.6051 | quercus_suber | cds-POF22596.1 | 32.2078 | 26.7532 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
