RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	scaffold_600602.1	Gene ID		Accession	-
Symbol		Alias	-	Full Name
Status	Confidence	Length		Strand
Position		RNA binding domain	Ribosomal_S17e
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	scaffold_600602.1	464	139aa	scaffold_600602.1

Gene Model

Click here to download scaffold_600602.1's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download scaffold_600602.1's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
scaffold_600602.1	arabidopsis_lyrata	fgenesh2_kg.6__397__AT2G04390.1	92.7536	88.4058	arabidopsis_lyrata	scaffold_600602.1	92.0863	87.7698
scaffold_600602.1	arabidopsis_lyrata	fgenesh2_kg.3__1096__AT3G10610.1	90.5797	86.2319	arabidopsis_lyrata	scaffold_600602.1	89.9281	85.6115

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	79.1367	69.7842	chondrus_crispus	CDF35824	82.0896	72.3881
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	80.5755	67.6259	chlamydomonas_reinhardtii	PNW75062	80.5755	67.6259
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	85.6115	76.9784	marchantia_polymorpha	PTQ30008	80.4054	72.2973
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.0863	83.4532	cannabis_sativa_female	cds.evm.model.07.1558.6.5bd9b13c	89.5105	81.1189
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	87.0504	75.5396	ficus_carica	FCD_00007435-RA:cds	90.9774	78.9474
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.2086	70.5036	ficus_carica	FCD_00009298-RA:cds	91.8519	72.5926
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	90.6475	82.7338	ficus_carica	FCD_00010462-RA:cds	67.3797	61.4973
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	90.6475	85.6115	beta_vulgaris	KMS97926	88.7324	83.8028
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.0863	84.8921	cucumis_melo	MELO3C019907.2.1	90.7801	83.6879
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.0863	85.6115	cucumis_sativus	KGN46049	90.7801	84.3972
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	91.3669	82.0144	populus_trichocarpa	Potri.010G241200.4.v4.1	89.4366	80.2817
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	90.6475	82.7338	populus_trichocarpa	Potri.008G017300.2.v4.1	90	82.1429
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	71.9424	66.9065	populus_trichocarpa	Potri.016G073750.1.v4.1	81.9672	76.2295
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.0863	84.8921	citrullus_lanatus	Cla97C08G151130.1	90.7801	83.6879
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	90.6475	82.0144	prunus_dulcis	VVA15436	90	81.4286
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	95.6835	91.3669	brassica_napus	CDY47259	97.0803	92.7007
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	95.6835	89.9281	brassica_napus	CDX80997	97.0803	91.2409
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	84.8921	74.8201	malus_domestica_golden	CDS:MD10G0089000.1	84.8921	74.8201
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	68.3453	61.1511	malus_domestica_golden	CDS:MD05G0185100.1	81.8966	73.2759
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	90.6475	84.8921	malus_domestica_golden	CDS:MD08G0157200.1	90	84.2857
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.9281	82.7338	malus_domestica_golden	CDS:MD14G0030000.1	89.9281	82.7338
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	63.3094	56.8345	malus_domestica_golden	CDS:MD10G0160200.1	83.0189	74.5283
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.2086	82.0144	malus_domestica_golden	CDS:MD12G0030200.1	89.2086	82.0144
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	79.1367	71.9424	malus_domestica_golden	CDS:MD07G0238700.1	85.2713	77.5194
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	58.9928	53.2374	malus_domestica_golden	CDS:MD15G0329900.1	69.4915	62.7119
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	90.6475	82.0144	prunus_persica	ONH95976	90	81.4286
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.8058	87.7698	cajanus_cajan	C.cajan_06349.t.cds1	92.8058	87.7698
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	88.4892	82.0144	cajanus_cajan	C.cajan_44089.t.cds1	87.234	80.8511
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.2086	82.7338	glycine_max	KRG89343	91.8519	85.1852
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.0863	86.3309	glycine_max	KRH72240	91.4286	85.7143
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.0863	87.0504	glycine_max	KRH32794	92.0863	87.0504
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	54.6763	48.2014	glycine_max	KRH30810	86.3636	76.1364
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	85.6115	78.4173	glycine_max	KRH50389	92.9688	85.1562
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.0863	84.8921	lupinus_angustifolius	OIW10218	90.1408	83.0986
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.8058	85.6115	lupinus_angustifolius	OIV94298	90.8451	83.8028
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.8058	85.6115	lupinus_angustifolius	OIV94297	90.8451	83.8028
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	90.6475	82.7338	lupinus_angustifolius	OIV89332	93.3333	85.1852
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	90.6475	82.7338	lupinus_angustifolius	OIW11370	90.6475	82.7338
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	87.7698	79.1367	phaseolus_vulgaris	ESW06266	90.3704	81.4815
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.0863	84.8921	phaseolus_vulgaris	ESW17335	91.4286	84.2857
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.0863	85.6115	phaseolus_vulgaris	ESW17333	91.4286	85
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	87.7698	79.1367	phaseolus_vulgaris	ESW06267	90.3704	81.4815
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.8058	86.3309	medicago_truncatula	KEH41964	89.5833	83.3333
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	85.6115	77.6978	vigna_angularis	KOM34507	66.8539	60.6742
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.9281	83.4532	vigna_angularis	KOM58466	92.5926	85.9259
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	93.5252	87.0504	pisum_sativum	Psat4g002320.1.cds	39.039	36.3363
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	90.6475	82.7338	pisum_sativum	Psat7g084320.1.cds1	88.1119	80.4196
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.0863	85.6115	pisum_sativum	Psat6g082440.2.cds1	88.2759	82.069
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	76.259	70.5036	vigna_radiata	Vradi08g05180.1	90.5983	83.7607
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	75.5396	69.7842	vigna_radiata	Vradi08g05190.1	70.4698	65.1007
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.9281	83.4532	vigna_unguiculata	Vigun10g028000.1.v1.2.CDS.1	92.5926	85.9259
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	93.5252	87.0504	vigna_unguiculata	Vigun07g058166.1.v1.2.CDS.1	92.8571	86.4286
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	88.4892	83.4532	vigna_unguiculata	Vigun03g194200.1.v1.2.CDS.1	91.1111	85.9259
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.8058	86.3309	vigna_unguiculata	Vigun07g058232.1.v1.2.CDS.1	92.1429	85.7143
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	87.7698	82.0144	solanum_lycopersicum	Solyc10g083165.1.1	88.4058	82.6087
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	90.6475	81.295	manihot_esculenta	OAY39066	88.1119	79.021
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	90.6475	81.295	manihot_esculenta	OAY38987	88.7324	79.5775
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.8058	87.0504	solanum_tuberosum	PGSC0003DMT400072583	85.4305	80.1325
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	88.4892	82.0144	sesamum_indicum	SIN_1007804.t.cds1	87.234	80.8511
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	88.4892	82.0144	sesamum_indicum	SIN_1013076.t.cds1	86.6197	80.2817
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	91.3669	84.8921	lactuca_sativa	cds-PLY85597.1	85.2349	79.1946
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.8058	86.3309	lactuca_sativa	cds-PLY82222.1	86.5772	80.5369
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	47.482	41.7266	helianthus_annuus	mRNA:HanXRQr2_Chr04g0149181	50.7692	44.6154
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.0863	85.6115	helianthus_annuus	CDS:HanXRQr2_Chr01g0037851.1	88.2759	82.069
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	90.6475	84.1727	helianthus_annuus	CDS:HanXRQr2_Chr02g0078131.1	88.1119	81.8182
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	90.6475	84.1727	helianthus_annuus	mRNA:HanXRQr2_Chr13g0583501	63	58.5
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	85.6115	73.3813	avena_sativa_sang	AVESA.00010b.r2.1CG0093670.1.CDS.1	83.2168	71.3287
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	84.8921	72.6619	avena_sativa_sang	AVESA.00010b.r2.1DG0184020.1.CDS.1	82.5175	70.6294
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	85.6115	73.3813	avena_sativa_sang	AVESA.00010b.r2.1AG0065100.1.CDS.1	83.2168	71.3287
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	84.8921	72.6619	avena_sativa_ot3098	cds.AVESA.00001b.r3.1Dg0000523.1	68.2081	58.3815
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	85.6115	73.3813	avena_sativa_ot3098	cds.AVESA.00001b.r3.1Ag0000565.1	68.3908	58.6207
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	85.6115	73.3813	avena_sativa_ot3098	cds.AVESA.00001b.r3.1Cg0001151.1	83.2168	71.3287
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.2086	78.4173	oryza_longistaminata	KN539358.1_FGP003	86.1111	75.6944
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	86.3309	71.9424	oryza_longistaminata	KN539745.1_FGP005	81.0811	67.5676
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	88.4892	74.1007	oryza_rufipogon	ORUFI10G10230.1	87.234	73.0496
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	88.4892	77.6978	oryza_rufipogon	ORUFI03G00520.1	85.4167	75
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	85.6115	74.1007	lolium_perenne	cds.KYUSt_chr1.18050	83.2168	72.028
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.2086	76.9784	oryza_brachyantha	OB03G10770.1	56.621	48.8584
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	87.7698	73.3813	oryza_brachyantha	OB10G17580.1	60.396	50.495
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.2086	77.6978	oryza_punctata	OPUNC03G00640.1	86.7133	75.5245
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.2086	77.6978	oryza_punctata	OPUNC03G00680.1	86.7133	75.5245
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.2086	75.5396	oryza_punctata	OPUNC10G08460.1	87.9433	74.4681
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.2086	78.4173	oryza_glaberrima	ORGLA03G0005400.1	86.1111	75.6944
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	88.4892	74.1007	oryza_glaberrima	ORGLA10G0083900.1	87.234	73.0496
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	85.6115	71.9424	secale_cereale	SECCE1Rv1G0025540.1.CDS.1	83.2168	69.9301
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	88.4892	76.259	setaria_viridis	TKV93304	86.6197	74.6479
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	88.4892	75.5396	setaria_viridis	TKV97540	86.014	73.4266
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	88.4892	76.259	setaria_italica	KQK88669	86.6197	74.6479
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	88.4892	75.5396	setaria_italica	KQK92035	67.2131	57.377
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	86.3309	72.6619	triticum_urartu	TuG1812G0100001875.01.T01.cds388440	83.9161	70.6294
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.2086	75.5396	zea_mays	Zm00001eb373790_P001	87.3239	73.9437
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.2086	74.1007	zea_mays	Zm00001eb278610_P001	87.3239	72.5352
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	86.3309	72.6619	triticum_turgidum	TRITD1Av1G101850.2	83.9161	70.6294
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	85.6115	71.9424	triticum_turgidum	TRITD1Bv1G103320.1	83.2168	69.9301
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	87.7698	79.1367	ananas_comosus	Aco007715.1.mrna1	62.8866	56.701
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	86.3309	72.6619	triticum_aestivum	TraesCS1A02G159100.1.cds1	83.9161	70.6294
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	85.6115	71.9424	triticum_aestivum	TraesCS1D02G156400.2.cds1	83.2168	69.9301
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	85.6115	71.9424	triticum_aestivum	TraesCS1B02G174800.1.cds1	83.2168	69.9301
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	71.223	54.6763	caenorhabditis_elegans	T08B2.10.1	76.1538	58.4615
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.2086	74.8201	sorghum_bicolor	EER88019	87.3239	73.2394
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	71.223	57.554	homo_sapiens	ENSP00000498019	73.3333	59.2593
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	88.4892	82.7338	amborella_trichopoda	ERN08126	85.4167	79.8611
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.9281	82.7338	amborella_trichopoda	ERN16202	85.034	78.2313
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.9281	82.7338	corylus_avellana	Cav01g36750.t1.cds1	86.8056	79.8611
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.2086	84.8921	vitis_vinifera	Vitvi08g01397_P001	87.9433	83.6879
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	71.223	57.554	drosophila_melanogaster	FBpp0076207	75.5725	61.0687
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.8058	87.0504	ipomoea_triloba	itb09g14170.t1	88.9655	83.4483
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.9281	82.7338	ipomoea_triloba	itb01g13380.t1	87.4126	80.4196
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	90.6475	82.7338	ipomoea_triloba	itb15g01850.t1	86.8966	79.3103
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	87.7698	74.8201	brachypodium_distachyon	KQJ97147	84.1379	71.7241
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	88.4892	74.1007	oryza_sativa	Os10t0411800-01	87.234	73.0496
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	88.4892	77.6978	oryza_sativa	Os03t0109500-00	85.4167	75
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	88.4892	74.1007	oryza_meridionalis	OMERI10G07010.1	87.234	73.0496
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	88.4892	74.1007	oryza_meridionalis	OMERI10G07050.1	87.234	73.0496
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.9281	76.259	eragrostis_curvula	TVU30333	88.0282	74.6479
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	85.6115	76.9784	physcomitrium_patens	Pp3c7_21070V3.1	82.6389	74.3056
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	86.3309	77.6978	physcomitrium_patens	Pp3c2_34780V3.2	83.3333	75
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	86.3309	77.6978	physcomitrium_patens	Pp3c11_2540V3.2	83.3333	75
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	85.6115	76.259	physcomitrium_patens	Pp3c7_21140V3.3	71.2575	63.4731
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	58.2734	48.9209	physcomitrium_patens	Pp3c3_14880V3.1	61.3636	51.5152
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	86.3309	77.6978	physcomitrium_patens	Pp3c11_2530V3.1	83.3333	75
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.0863	85.6115	gossypium_raimondii	KJB33837	90.7801	84.3972
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	90.6475	83.4532	gossypium_raimondii	KJB11552	88.7324	81.6901
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.0863	85.6115	gossypium_raimondii	KJB70895	90.1408	83.8028
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	91.3669	85.6115	gossypium_raimondii	KJB74568	89.4366	83.8028
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	91.3669	82.7338	prunus_avium	Pav_sc0000055.1_g160.1.mk:CDS:1	90.7143	82.1429
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	88.4892	74.1007	oryza_glumipatula	OGLUM10G09560.1	87.234	73.0496
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	88.4892	77.6978	oryza_glumipatula	OGLUM03G00680.1	85.4167	75
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	93.5252	86.3309	nicotiana_attenuata	OIT06702	87.2483	80.5369
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	91.3669	82.7338	coffea_canephora	CDP20434	88.8112	80.4196
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.9281	79.8561	theobroma_cacao	EOY11844	58.6854	52.1127
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.2086	81.295	fraxinus_excelsior	FRAEX38873_v2_000195340.1.cds1	86.1111	78.4722
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.9281	82.0144	fraxinus_excelsior	FRAEX38873_v2_000042370.1.cds1	88.0282	80.2817
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.9281	82.0144	fraxinus_excelsior	FRAEX38873_v2_000256210.1.cds1	88.0282	80.2817
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	88.4892	74.1007	oryza_indica	BGIOSGA032897-PA	87.234	73.0496
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	88.4892	77.6978	oryza_indica	BGIOSGA011598-PA	63.7306	55.9585
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.0863	86.3309	cynara_cardunculus	KVI08331	85.906	80.5369
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	91.3669	85.6115	cynara_cardunculus	KVH88259	71.3483	66.8539
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	91.3669	84.1727	juglans_regia	cds.Jr14_04960_p1	88.1944	81.25
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	69.0648	63.3094	juglans_regia	cds.Jr11_05620_p1	80.6723	73.9496
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	90.6475	83.4532	juglans_regia	cds.Jr05_04540_p1	88.7324	81.6901
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	91.3669	84.1727	juglans_regia	cds.Jr14_04970_p1	88.1944	81.25
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.0863	84.8921	pistacia_vera	cds-EVM0031101.1	90.1408	83.0986
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	98.5611	95.6835	arabis_alpina	KFK25026	98.5611	95.6835
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	93.5252	86.3309	eucalyptus_grandis	KCW65190	93.5252	86.3309
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.9281	83.4532	chenopodium_quinoa	AUR62042092-RA:cds	88.6525	82.2695
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	74.8201	64.0288	galdieria_sulphuraria	EME32187	78.1955	66.9173
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	86.3309	78.4173	chara_braunii	GBG70270	78.9474	71.7105
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	91.3669	84.8921	citrus_clementina	ESR59001	91.3669	84.8921
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	97.8417	92.8058	eutrema_salsugineum	ESQ40546	97.8417	92.8058
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	72.6619	55.3957	saccharomyces_cerevisiae	YML024W	74.2647	56.6176
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	72.6619	55.3957	saccharomyces_cerevisiae	YDR447C	74.2647	56.6176
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.2086	78.4173	oryza_barthii	OBART03G00730.1	86.1111	75.6944
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	87.7698	83.4532	dioscorea_rotundata	DRNTG_07547.1.cds1	87.1429	82.8571
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	86.3309	81.295	dioscorea_rotundata	DRNTG_32913.1.cds1	85.7143	80.7143
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	93.5252	87.0504	corymbia_citriodora	cds-KAF8005659.1	93.5252	87.0504
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.8058	86.3309	corymbia_citriodora	cds-KAF8016713.1	92.1429	85.7143
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.8058	86.3309	corymbia_citriodora	cds-KAF8008077.1	92.1429	85.7143
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	87.0504	80.5755	musa_acuminata	Ma11_p02570.1	85.8156	79.4326
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.9281	81.295	musa_acuminata	Ma04_p20840.1	86.2069	77.931
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	87.0504	79.1367	musa_acuminata	Ma04_p35670.1	85.8156	78.0142
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	87.0504	78.4173	musa_acuminata	Ma08_p12170.1	85.2113	76.7606
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.0863	87.7698	rosa_chinensis	PRQ44063	91.4286	87.1429
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	46.0432	41.7266	rosa_chinensis	PRQ29748	78.0488	70.7317
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	46.7626	41.0072	rosa_chinensis	PRQ42727	81.25	71.25
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	48.2014	41.7266	rosa_chinensis	PRQ17974	83.75	72.5
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	95.6835	89.9281	brassica_oleracea	Bo3g003810.1	97.0803	91.2409
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	90.6475	83.4532	quercus_lobata	QL04p046951:mrna:CDS:1	89.3617	82.2695
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	71.9424	63.3094	kalanchoe_fedtschenkoi	Kaladp0008s0358.1.v1.1.CDS.1	83.3333	73.3333
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.2086	79.8561	kalanchoe_fedtschenkoi	Kaladp0039s0765.1.v1.1.CDS.1	87.9433	78.7234
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	88.4892	79.1367	kalanchoe_fedtschenkoi	Kaladp0008s0348.1.v1.1.CDS.1	86.014	76.9231
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.9281	82.0144	kalanchoe_fedtschenkoi	Kaladp0042s0125.1.v1.1.CDS.1	88.6525	80.8511
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	90.6475	82.0144	kalanchoe_fedtschenkoi	Kaladp0024s0272.1.v1.1.CDS.1	90	81.4286
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	76.9784	64.7482	cyanidioschyzon_merolae	CMT402CT	80.4511	67.6692
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	100	100	arabidopsis_halleri	g15548.t1.cds1	100	100
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	82.0144	67.6259	ostreococcus_lucimarinus	ABO95665	85.0746	70.1493
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	86.3309	72.6619	triticum_dicoccoides	TRIDC1AG024160.1	78.9474	66.4474
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	85.6115	71.9424	triticum_dicoccoides	TRIDC1BG029370.1	79.3333	66.6667
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.8058	87.7698	daucus_carota	KZM91907	87.7551	82.9932
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	93.5252	85.6115	daucus_carota	KZM99213	88.4354	80.9524
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	78.4173	69.0648	nymphaea_colorata	NC3G0228090.1:cds	63.0058	55.4913
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	98.5611	96.4029	camelina_sativa	Csa08g058270.1.cds1	97.8571	95.7143
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	98.5611	96.4029	camelina_sativa	Csa13g008250.1.cds1	97.8571	95.7143
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	98.5611	96.4029	camelina_sativa	Csa20g008470.1.cds1	97.8571	95.7143
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	84.1727	76.259	selaginella_moellendorffii	EFJ26788	80.137	72.6027
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	84.1727	76.259	selaginella_moellendorffii	EFJ26481	80.137	72.6027
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	95.6835	91.3669	brassica_rapa_ro18	A03p002680.1_BraROA.1.cds1	97.0803	92.7007
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.9281	76.259	eragrostis_tef	Et_1A_004907.CDS1	88.0282	74.6479
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	90.6475	76.9784	eragrostis_tef	Et_1B_009955.CDS1	88.7324	75.3521
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.9281	74.8201	eragrostis_tef	Et_9B_063843.CDS1	88.0282	73.2394
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.9281	74.8201	eragrostis_tef	Et_9A_061160.CDS1	88.0282	73.2394
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	86.3309	74.1007	leersia_perrieri	LPERR03G00730.1	85.7143	73.5714
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	90.6475	74.8201	leersia_perrieri	LPERR10G07020.1	88.7324	73.2394
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.2086	74.8201	panicum_hallii	PUZ42268	87.3239	73.2394
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.0863	84.8921	actinidia_chinensis	PSS15887	85.906	79.1946
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.8058	86.3309	actinidia_chinensis	PSS23577	87.1622	81.0811
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.0863	84.8921	actinidia_chinensis	PSS01603	86.4865	79.7297
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.0863	84.8921	actinidia_chinensis	PSR76759	85.906	79.1946
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.8058	86.3309	actinidia_chinensis	PSS23574	87.1622	81.0811
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	85.6115	71.9424	aegilops_tauschii	AET1Gv20410300.1	78.2895	65.7895
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.9281	82.0144	olea_europaea	OE9A007081C1	88.0282	80.2817
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.2086	81.295	olea_europaea	OE9A011591C1	87.3239	79.5775
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.2086	81.295	olea_europaea	OE9A091600C1	87.3239	79.5775
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.2086	76.259	echinochloa_crusgalli	scaffold165.84.cds	87.3239	74.6479
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	88.4892	76.259	echinochloa_crusgalli	scaffold27.762.cds	86.6197	74.6479
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	89.2086	76.259	echinochloa_crusgalli	scaffold112.251.cds	87.3239	74.6479
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	88.4892	74.1007	oryza_nivara	ONIVA10G09110.1	87.234	73.0496
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	88.4892	77.6978	oryza_nivara	ONIVA11G21190.1	85.4167	75
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	91.3669	84.8921	trifolium_pratense	Tp57577_TGAC_v2_mRNA5305	22.4382	20.8481
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	92.0863	84.8921	trifolium_pratense	Tp57577_TGAC_v2_mRNA9023	87.6712	80.8219
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	90.6475	83.4532	quercus_suber	cds-POE86140.1	89.3617	82.2695
scaffold_600602.1	arabidopsis_lyrata	scaffold_600602.1	90.6475	83.4532	quercus_suber	cds-POE86142.1	89.3617	82.2695

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression