Description

Ensembl ID scaffold_201036.1 Gene ID Accession -
Symbol Alias - Full Name
Status Confidence Length Strand
Position RNA binding domain Ribosomal_S4 , S4
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- scaffold_201036.1 1236 201aa scaffold_201036.1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
scaffold_201036.1arabidopsis_lyratafgenesh2_kg.6__1553__AT5G15750.129.670319.7802arabidopsis_lyratascaffold_201036.126.865717.9104
scaffold_201036.1arabidopsis_lyratascaffold_201098.199.502599.5025arabidopsis_lyratascaffold_201036.199.502599.5025

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
scaffold_201036.1arabidopsis_lyratascaffold_201036.173.134359.204chondrus_crispusCCP3820573.134359.204
scaffold_201036.1arabidopsis_lyratascaffold_201036.129.850724.8756marchantia_polymorphaPTQ333247562.5
scaffold_201036.1arabidopsis_lyratascaffold_201036.184.079680.0995papaver_somniferumRZC8161292.857188.4615
scaffold_201036.1arabidopsis_lyratascaffold_201036.185.074679.602papaver_somniferumRZC496893835.5556
scaffold_201036.1arabidopsis_lyratascaffold_201036.121.890521.393beta_vulgarisKMS9693581.481579.6296
scaffold_201036.1arabidopsis_lyratascaffold_201036.121.890520.8955cucumis_meloMELO3C027485.2.189.795985.7143
scaffold_201036.1arabidopsis_lyratascaffold_201036.128.855726.3682cucumis_sativusKGN6131571.604965.4321
scaffold_201036.1arabidopsis_lyratascaffold_201036.192.039888.5572populus_trichocarpaPotri.013G163300.1.v4.192.039888.5572
scaffold_201036.1arabidopsis_lyratascaffold_201036.199.502599.5025arabidopsis_thalianaATCG00380.199.502599.5025
scaffold_201036.1arabidopsis_lyratascaffold_201036.193.034890.5473prunus_dulcisVVA3777693.034890.5473
scaffold_201036.1arabidopsis_lyratascaffold_201036.191.542387.5622cajanus_cajanC.cajan_28971.t.cds191.542387.5622
scaffold_201036.1arabidopsis_lyratascaffold_201036.192.039885.5721cajanus_cajanC.cajan_30435.t.cds192.039885.5721
scaffold_201036.1arabidopsis_lyratascaffold_201036.192.039885.5721cajanus_cajanC.cajan_45649.t.cds192.039885.5721
scaffold_201036.1arabidopsis_lyratascaffold_201036.133.333331.8408glycine_maxKRH0028281.707378.0488
scaffold_201036.1arabidopsis_lyratascaffold_201036.180.59775.6219glycine_maxKRH7645987.567682.1622
scaffold_201036.1arabidopsis_lyratascaffold_201036.156.716453.2338glycine_maxKRH2008889.062583.5938
scaffold_201036.1arabidopsis_lyratascaffold_201036.190.547384.5771lupinus_angustifoliusOIV8973789.655283.7438
scaffold_201036.1arabidopsis_lyratascaffold_201036.190.547384.5771lupinus_angustifoliusOIW1725189.655283.7438
scaffold_201036.1arabidopsis_lyratascaffold_201036.147.761243.2836phaseolus_vulgarisESW0970189.719681.3084
scaffold_201036.1arabidopsis_lyratascaffold_201036.191.542387.5622medicago_truncatulaAES8823991.542387.5622
scaffold_201036.1arabidopsis_lyratascaffold_201036.190.049883.5821vigna_unguiculataVigunL042200.1.v1.2.CDS.190.049883.5821
scaffold_201036.1arabidopsis_lyratascaffold_201036.189.552283.0846vigna_unguiculataVigunL007100.1.v1.2.CDS.189.552283.0846
scaffold_201036.1arabidopsis_lyratascaffold_201036.190.049883.5821vigna_unguiculataVigunL034100.1.v1.2.CDS.190.049883.5821
scaffold_201036.1arabidopsis_lyratascaffold_201036.189.054782.5871vigna_unguiculataVigunL082500.1.v1.2.CDS.189.054782.5871
scaffold_201036.1arabidopsis_lyratascaffold_201036.190.049883.5821vigna_unguiculataVigunL081500.1.v1.2.CDS.190.049883.5821
scaffold_201036.1arabidopsis_lyratascaffold_201036.188.557282.0896vigna_unguiculataVigun04g100100.1.v1.2.CDS.188.557282.0896
scaffold_201036.1arabidopsis_lyratascaffold_201036.190.049883.5821vigna_unguiculataVigunL029600.1.v1.2.CDS.190.049883.5821
scaffold_201036.1arabidopsis_lyratascaffold_201036.190.049883.5821vigna_unguiculataVigunL080600.1.v1.2.CDS.190.049883.5821
scaffold_201036.1arabidopsis_lyratascaffold_201036.154.726451.2438solanum_lycopersicumSolyc11g022610.2.168.32363.9752
scaffold_201036.1arabidopsis_lyratascaffold_201036.165.671663.1841solanum_lycopersicumSolyc09g015330.1.1.17572.1591
scaffold_201036.1arabidopsis_lyratascaffold_201036.191.542388.0597capsicum_annuumPHT7375791.542388.0597
scaffold_201036.1arabidopsis_lyratascaffold_201036.191.542388.0597capsicum_annuumPHT7987891.542388.0597
scaffold_201036.1arabidopsis_lyratascaffold_201036.190.547386.5672capsicum_annuumPHT8406690.547386.5672
scaffold_201036.1arabidopsis_lyratascaffold_201036.177.611975.1244solanum_tuberosumPGSC0003DMT40006177886.666783.8889
scaffold_201036.1arabidopsis_lyratascaffold_201036.193.034890.5473sesamum_indicumSIN_1003795.t.cds193.034890.5473
scaffold_201036.1arabidopsis_lyratascaffold_201036.192.039889.0547lactuca_sativacds-PLY75278.192.039889.0547
scaffold_201036.1arabidopsis_lyratascaffold_201036.149.253747.7612helianthus_annuusCDS:HanXRQr2_Chr13g0602381.187.610684.9557
scaffold_201036.1arabidopsis_lyratascaffold_201036.192.537390.0498helianthus_annuusCDS:HanXRQr2_Chr02g0061441.192.537390.0498
scaffold_201036.1arabidopsis_lyratascaffold_201036.149.253747.7612helianthus_annuusCDS:HanXRQr2_Chr13g0602301.187.610684.9557
scaffold_201036.1arabidopsis_lyratascaffold_201036.187.064782.5871helianthus_annuusmRNA:HanXRQr2_Chr13g060213162.72459.4982
scaffold_201036.1arabidopsis_lyratascaffold_201036.148.258743.2836avena_sativa_sangAVESA.00010b.r2.UnG1517760.1.CDS.185.840776.9911
scaffold_201036.1arabidopsis_lyratascaffold_201036.187.562279.1045avena_sativa_sangAVESA.00010b.r2.UnG1500040.1.CDS.187.562279.1045
scaffold_201036.1arabidopsis_lyratascaffold_201036.148.258743.2836avena_sativa_sangAVESA.00010b.r2.UnG1477770.1.CDS.185.840776.9911
scaffold_201036.1arabidopsis_lyratascaffold_201036.148.258743.2836avena_sativa_sangAVESA.00010b.r2.UnG1515410.1.CDS.185.840776.9911
scaffold_201036.1arabidopsis_lyratascaffold_201036.187.562279.602avena_sativa_sangAVESA.00010b.r2.4AG0618460.1.CDS.187.562279.602
scaffold_201036.1arabidopsis_lyratascaffold_201036.148.258743.2836avena_sativa_sangAVESA.00010b.r2.UnG1470560.1.CDS.185.840776.9911
scaffold_201036.1arabidopsis_lyratascaffold_201036.133.333329.8507avena_sativa_sangAVESA.00010b.r2.UnG1474210.1.CDS78.823570.5882
scaffold_201036.1arabidopsis_lyratascaffold_201036.148.258743.2836avena_sativa_sangAVESA.00010b.r2.UnG1510670.1.CDS.185.840776.9911
scaffold_201036.1arabidopsis_lyratascaffold_201036.148.756242.7861avena_sativa_sangAVESA.00010b.r2.5AG0840080.1.CDS.186.725776.1062
scaffold_201036.1arabidopsis_lyratascaffold_201036.146.268741.2935avena_sativa_sangAVESA.00010b.r2.7CG0662480.1.CDS.182.300973.4513
scaffold_201036.1arabidopsis_lyratascaffold_201036.149.751244.2786avena_sativa_sangAVESA.00010b.r2.UnG1521890.1.CDS8071.2
scaffold_201036.1arabidopsis_lyratascaffold_201036.148.756243.7811avena_sativa_sangAVESA.00010b.r2.UnG1501460.1.CDS.186.725777.8761
scaffold_201036.1arabidopsis_lyratascaffold_201036.187.064779.1045avena_sativa_sangAVESA.00010b.r2.UnG1494310.1.CDS.187.064779.1045
scaffold_201036.1arabidopsis_lyratascaffold_201036.166.666761.194avena_sativa_sangAVESA.00010b.r2.UnG1486750.1.CDS.172.04366.129
scaffold_201036.1arabidopsis_lyratascaffold_201036.164.179159.204avena_sativa_sangAVESA.00010b.r2.UnG1489310.1.CDS85.430578.8079
scaffold_201036.1arabidopsis_lyratascaffold_201036.148.258743.7811avena_sativa_sangAVESA.00010b.r2.UnG1517810.1.CDS.185.840777.8761
scaffold_201036.1arabidopsis_lyratascaffold_201036.148.258743.2836avena_sativa_sangAVESA.00010b.r2.4AG0653730.1.CDS.185.840776.9911
scaffold_201036.1arabidopsis_lyratascaffold_201036.182.089672.6368avena_sativa_sangAVESA.00010b.r2.UnG1491620.1.CDS80.882471.5686
scaffold_201036.1arabidopsis_lyratascaffold_201036.187.562279.602avena_sativa_ot3098cds.AVESA.00001b.r3.3Cg0002205.287.562279.602
scaffold_201036.1arabidopsis_lyratascaffold_201036.187.562279.602avena_sativa_ot3098cds.AVESA.00001b.r3.Ung0000538.187.562279.602
scaffold_201036.1arabidopsis_lyratascaffold_201036.187.562279.602avena_sativa_ot3098cds.AVESA.00001b.r3.3Cg0002208.187.562279.602
scaffold_201036.1arabidopsis_lyratascaffold_201036.169.154261.6915oryza_rufipogonORUFI10G17460.182.248573.3728
scaffold_201036.1arabidopsis_lyratascaffold_201036.153.233847.2637oryza_brachyanthaOB01G28650.184.920675.3968
scaffold_201036.1arabidopsis_lyratascaffold_201036.188.059780.597oryza_glaberrimaORGLA03G0397900.188.059780.597
scaffold_201036.1arabidopsis_lyratascaffold_201036.188.059780.597oryza_glaberrimaORGLA11G0193200.188.059780.597
scaffold_201036.1arabidopsis_lyratascaffold_201036.188.059780.597oryza_glaberrimaORGLA06G0114000.188.059780.597
scaffold_201036.1arabidopsis_lyratascaffold_201036.188.059780.597oryza_glaberrimaORGLA10G0155100.188.059780.597
scaffold_201036.1arabidopsis_lyratascaffold_201036.188.059780.597oryza_glaberrimaORGLA06G0240300.188.059780.597
scaffold_201036.1arabidopsis_lyratascaffold_201036.187.064779.1045secale_cerealeSECCE5Rv1G0355590.1.CDS.187.064779.1045
scaffold_201036.1arabidopsis_lyratascaffold_201036.167.661760.199setaria_italicaKQK8574383.950674.6914
scaffold_201036.1arabidopsis_lyratascaffold_201036.186.567279.602zea_maysZm00001eb039210_P00186.567279.602
scaffold_201036.1arabidopsis_lyratascaffold_201036.148.258744.2786zea_maysZm00001eb438350_P00185.840778.7611
scaffold_201036.1arabidopsis_lyratascaffold_201036.186.567279.602zea_maysZm00001eb435420_P00186.567279.602
scaffold_201036.1arabidopsis_lyratascaffold_201036.186.567279.602zea_maysZm00001eb435680_P00186.567279.602
scaffold_201036.1arabidopsis_lyratascaffold_201036.174.129466.6667zea_maysZm00001eb231240_P00183.707975.2809
scaffold_201036.1arabidopsis_lyratascaffold_201036.186.567279.602zea_maysZm00001eb039080_P00186.567279.602
scaffold_201036.1arabidopsis_lyratascaffold_201036.186.567279.602zea_maysZm00001eb435220_P00186.567279.602
scaffold_201036.1arabidopsis_lyratascaffold_201036.186.567279.602zea_maysZm00001eb435020_P00186.567279.602
scaffold_201036.1arabidopsis_lyratascaffold_201036.173.134367.1642zea_maysZm00001eb039100_P00185.465178.4884
scaffold_201036.1arabidopsis_lyratascaffold_201036.137.810934.3284zea_maysZm00001eb434930_P00182.608775
scaffold_201036.1arabidopsis_lyratascaffold_201036.186.567279.602zea_maysZm00001eb440990_P00186.567279.602
scaffold_201036.1arabidopsis_lyratascaffold_201036.185.572176.6169triticum_turgidumTRITD0Uv1G097310.18677
scaffold_201036.1arabidopsis_lyratascaffold_201036.182.089672.1393triticum_aestivumTraesCS1D02G169600.182.914672.8643
scaffold_201036.1arabidopsis_lyratascaffold_201036.179.104569.6517triticum_aestivumTraesCS7A02G030200.1.cds179.570
scaffold_201036.1arabidopsis_lyratascaffold_201036.183.084675.1244triticum_aestivumTraesCS5D02G010800.185.64177.4359
scaffold_201036.1arabidopsis_lyratascaffold_201036.187.064779.1045triticum_aestivumTraesCS3D02G057700.1.cds187.064779.1045
scaffold_201036.1arabidopsis_lyratascaffold_201036.185.572176.6169triticum_aestivumTraesCS6B02G038000.1.cds18677
scaffold_201036.1arabidopsis_lyratascaffold_201036.174.129465.1741triticum_aestivumTraesCS2D02G557000.173.39964.532
scaffold_201036.1arabidopsis_lyratascaffold_201036.186.069679.1045triticum_aestivumTraesCS3A02G194700.186.934779.8995
scaffold_201036.1arabidopsis_lyratascaffold_201036.188.059779.602brachypodium_distachyonPNT7050388.059779.602
scaffold_201036.1arabidopsis_lyratascaffold_201036.179.104575.6219gossypium_raimondiiKJB3735387.362683.5165
scaffold_201036.1arabidopsis_lyratascaffold_201036.193.034891.5423fraxinus_excelsiorFRAEX38873_v2_000400480.1.cds193.034891.5423
scaffold_201036.1arabidopsis_lyratascaffold_201036.155.721455.7214arabis_alpinaKFK4039599.11599.115
scaffold_201036.1arabidopsis_lyratascaffold_201036.149.253744.7761eucalyptus_grandisKCW8627587.610679.646
scaffold_201036.1arabidopsis_lyratascaffold_201036.181.59281.0945eutrema_salsugineumESQ4594995.906495.3216
scaffold_201036.1arabidopsis_lyratascaffold_201036.143.781124.8756saccharomyces_cerevisiaeYNL137C18.10710.2881
scaffold_201036.1arabidopsis_lyratascaffold_201036.171.144369.1542corymbia_citriodoracds-KAF8028618.188.819986.3354
scaffold_201036.1arabidopsis_lyratascaffold_201036.156.218953.2338corymbia_citriodoracds-KAF8025233.186.923182.3077
scaffold_201036.1arabidopsis_lyratascaffold_201036.141.79133.8308brassica_oleraceaBo7g033150.137.530.3571
scaffold_201036.1arabidopsis_lyratascaffold_201036.191.044887.5622kalanchoe_fedtschenkoiKaladp0042s0394.1.v1.1.CDS.191.044887.5622
scaffold_201036.1arabidopsis_lyratascaffold_201036.140.79639.3035kalanchoe_fedtschenkoiKaladp0515s0225.1.v1.1.CDS.18279
scaffold_201036.1arabidopsis_lyratascaffold_201036.159.701542.2886cyanidioschyzon_merolaeCMV009CT63.157944.7368
scaffold_201036.1arabidopsis_lyratascaffold_201036.147.761242.7861triticum_dicoccoidesTRIDC7BG035330.184.955776.1062
scaffold_201036.1arabidopsis_lyratascaffold_201036.147.263742.2886triticum_dicoccoidesTRIDC3AG043300.184.070875.2212
scaffold_201036.1arabidopsis_lyratascaffold_201036.185.074676.1194triticum_dicoccoidesTRIDC6BG004560.185.576.5
scaffold_201036.1arabidopsis_lyratascaffold_201036.151.243846.2687triticum_dicoccoidesTRIDC7AG002770.185.12476.8595
scaffold_201036.1arabidopsis_lyratascaffold_201036.124.378122.8856triticum_dicoccoidesTRIDC3BG041080.187.582.1429
scaffold_201036.1arabidopsis_lyratascaffold_201036.138.308533.3333triticum_dicoccoidesTRIDC4AG060410.181.914971.2766
scaffold_201036.1arabidopsis_lyratascaffold_201036.192.537388.0597daucus_carotaKZM8122492.537388.0597
scaffold_201036.1arabidopsis_lyratascaffold_201036.158.20948.7562selaginella_moellendorffiiADH1045660.309350.5155
scaffold_201036.1arabidopsis_lyratascaffold_201036.153.731344.7761selaginella_moellendorffiiEFJ0504952.941244.1176
scaffold_201036.1arabidopsis_lyratascaffold_201036.158.20948.7562selaginella_moellendorffiiADH1043660.309350.5155
scaffold_201036.1arabidopsis_lyratascaffold_201036.153.731344.7761selaginella_moellendorffiiEFJ0500552.941244.1176
scaffold_201036.1arabidopsis_lyratascaffold_201036.184.577177.1144panicum_halliiPUZ6071584.577177.1144
scaffold_201036.1arabidopsis_lyratascaffold_201036.184.577177.1144panicum_halliiPUZ6061384.577177.1144
scaffold_201036.1arabidopsis_lyratascaffold_201036.187.562283.5821actinidia_chinensisPSS0423489.795985.7143
scaffold_201036.1arabidopsis_lyratascaffold_201036.147.263742.2886aegilops_tauschiiAET5Gv20781300.184.070875.2212
scaffold_201036.1arabidopsis_lyratascaffold_201036.146.268739.801aegilops_tauschiiAET1Gv20447100.182.300970.7965
scaffold_201036.1arabidopsis_lyratascaffold_201036.129.850726.3682aegilops_tauschiiAET2Gv21209600.27566.25
scaffold_201036.1arabidopsis_lyratascaffold_201036.182.587174.6269aegilops_tauschiiAET2Gv21210000.185.56777.3196
scaffold_201036.1arabidopsis_lyratascaffold_201036.186.567279.1045aegilops_tauschiiAET5Gv20014000.186.567279.1045
scaffold_201036.1arabidopsis_lyratascaffold_201036.178.60769.6517aegilops_tauschiiAET1Gv20347500.179.39770.3518
scaffold_201036.1arabidopsis_lyratascaffold_201036.132.835816.9154quercus_subercds-POE94469.117.46038.99471

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression