Description

Ensembl ID itb15g00250 Gene ID Accession -
Symbol Alias - Full Name RNA polymerase sigma factor sigF, chloroplastic
Status Confidence Length 3392 bases Strand Plus strand
Position 15 : 160639 - 164030 RNA binding domain Sigma70_r3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
itb15g00250 Sigma70_r3 PF04539 1.8e-17 1
itb15g00250 Sigma70_r3 PF04539 1.8e-17 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- itb15g00250.t2 2285 550aa itb15g00250.t2
- itb15g00250.t1 2261 542aa itb15g00250.t1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
itb15g00250

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
itb15g00250

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression