RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	itb03g21980	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Triphosphate tunel metalloenzyme 3
Status	Confidence	Length	2682 bases	Strand	Plus strand
Position	3 : 19909763 - 19912444	RNA binding domain	CYTH
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
itb03g21980	CYTH	PF01928	1.2e-24	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	itb03g21980.t1	1003	202aa	itb03g21980.t1

Gene Model

Click here to download itb03g21980's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download itb03g21980's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
itb03g21980

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
itb03g21980

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression