Description

Ensembl ID gene-LSAT_9X32000 Gene ID Accession -
Symbol Alias - Full Name DNA-(apurinic or apyrimidinic site) lyase, chloroplastic
Status Confidence Length 4314 bases Strand Plus strand
Position 9 : 34460855 - 34465168 RNA binding domain SAP , Exo_endo_phos
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
cds-PLY75560 SAP PF02037 1.4e-06 1
cds-PLY75560 Exo_endo_phos PF03372 7.9e-21 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- rna-gnl
WGS:NBSK
LSAT_9X32000_mrna 1688 518aa cds-PLY75560.1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
gene-LSAT_9X32000

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
gene-LSAT_9X32000

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression