RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	gene-LSAT_4X167040	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	2622 bases	Strand	Minus strand
Position	4 : 340583375 - 340585996	RNA binding domain	SAP
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
cds-PLY66542	SAP	PF02037	8.6e-08	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	rna-gnl
WGS:NBSK
LSAT_4X167040_mrna	1312	381aa	cds-PLY66542.1

Gene Model

Click here to download gene-LSAT_4X167040's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download gene-LSAT_4X167040's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
gene-LSAT_4X167040

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
gene-LSAT_4X167040

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression