Description

Ensembl ID gene-LSAT_3X5900 Gene ID Accession -
Symbol Alias - Full Name DNA-directed RNA polymerase IV subunit 1
Status Confidence Length 6981 bases Strand Minus strand
Position 3 : 8062219 - 8069199 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
cds-PLY79057 RNA_pol_Rpb1_4 PF05000 6e-10 1
cds-PLY79057 RNA_pol_Rpb1_2 PF00623 2.6e-32 2
cds-PLY79057 RNA_pol_Rpb1_3 PF04983 1e-17 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- rna-gnl
WGS:NBSK
LSAT_3X5900_mrna 5043 1421aa cds-PLY79057.1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
gene-LSAT_3X5900

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
gene-LSAT_3X5900

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression