RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	gene-LSAT_2X73920	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Ribonuclease II family protein
Status	Confidence	Length	5355 bases	Strand	Minus strand
Position	2 : 147751692 - 147757046	RNA binding domain	PIN_4 , OB_Dis3 , RNB
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
cds-PLY82747	PIN_4	PF13638	9.9e-15	1
cds-PLY82747	OB_Dis3	PF17849	6.6e-18	2
cds-PLY82747	RNB	PF00773	8.9e-92	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	rna-gnl
WGS:NBSK
LSAT_2X73920_mrna	3325	933aa	cds-PLY82747.1

Gene Model

Click here to download gene-LSAT_2X73920's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download gene-LSAT_2X73920's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
gene-LSAT_2X73920

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
gene-LSAT_2X73920

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression