RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | gene-CFP56_53238 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
6197 bases |
Strand |
Minus strand |
Position |
PKMF03005726.1 : 49966 - 56162 |
RNA binding domain |
RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3 , RNA_pol_Rpb1_R , RNA_pol_Rpb1_6 , RNA_pol_Rpb1_7 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
cds-POF05851 |
RNA_pol_Rpb1_4 |
PF05000 |
1.9e-14 |
1 |
cds-POF05851 |
RNA_pol_Rpb1_1 |
PF04997 |
3.4e-104 |
2 |
cds-POF05851 |
RNA_pol_Rpb1_5 |
PF04998 |
1.5e-96 |
3 |
cds-POF05851 |
RNA_pol_Rpb1_2 |
PF00623 |
3.2e-74 |
4 |
cds-POF05851 |
RNA_pol_Rpb1_3 |
PF04983 |
9.7e-46 |
5 |
cds-POF05851 |
RNA_pol_Rpb1_R |
PF05001 |
5.7e-12 |
6 |
cds-POF05851 |
RNA_pol_Rpb1_R |
PF05001 |
5.7e-12 |
7 |
cds-POF05851 |
RNA_pol_Rpb1_R |
PF05001 |
5.7e-12 |
8 |
cds-POF05851 |
RNA_pol_Rpb1_R |
PF05001 |
5.7e-12 |
9 |
cds-POF05851 |
RNA_pol_Rpb1_R |
PF05001 |
5.7e-12 |
10 |
cds-POF05851 |
RNA_pol_Rpb1_R |
PF05001 |
5.7e-12 |
11 |
cds-POF05851 |
RNA_pol_Rpb1_R |
PF05001 |
5.7e-12 |
12 |
cds-POF05851 |
RNA_pol_Rpb1_R |
PF05001 |
5.7e-12 |
13 |
cds-POF05851 |
RNA_pol_Rpb1_R |
PF05001 |
5.7e-12 |
14 |
cds-POF05851 |
RNA_pol_Rpb1_R |
PF05001 |
5.7e-12 |
15 |
cds-POF05851 |
RNA_pol_Rpb1_6 |
PF04992 |
2.5e-55 |
16 |
cds-POF05851 |
RNA_pol_Rpb1_7 |
PF04990 |
3.7e-38 |
17 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
rna-CFP56_53238 |
5166 |
1721aa |
cds-POF05851.1 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
gene-CFP56_53238 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
gene-CFP56_53238 | | | | | | | | |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |