Description

Ensembl ID gene-CFP56_40045 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 2728 bases Strand Minus strand
Position PKMF03011773.1 : 477777 - 480504 RNA binding domain PPR_3 , PPR_long , PPR , MRP-S27
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
cds-POE84168 PPR_3 PF13812 1.1e-66 1
cds-POE84168 PPR_3 PF13812 1.1e-66 2
cds-POE84168 PPR_3 PF13812 1.1e-66 3
cds-POE84168 PPR_3 PF13812 1.1e-66 4
cds-POE84168 PPR_3 PF13812 1.1e-66 5
cds-POE84168 PPR_3 PF13812 1.1e-66 6
cds-POE84168 PPR_long PF17177 1e-31 7
cds-POE84168 PPR_long PF17177 1e-31 8
cds-POE84168 PPR PF01535 1.9e-103 9
cds-POE84168 PPR PF01535 1.9e-103 10
cds-POE84168 PPR PF01535 1.9e-103 11
cds-POE84168 PPR PF01535 1.9e-103 12
cds-POE84168 PPR PF01535 1.9e-103 13
cds-POE84168 PPR PF01535 1.9e-103 14
cds-POE84168 PPR PF01535 1.9e-103 15
cds-POE84168 PPR PF01535 1.9e-103 16
cds-POE84168 PPR PF01535 1.9e-103 17
cds-POE84168 PPR PF01535 1.9e-103 18
cds-POE84168 PPR PF01535 1.9e-103 19
cds-POE84168 PPR PF01535 1.9e-103 20
cds-POE84168 PPR PF01535 1.9e-103 21
cds-POE84168 PPR PF01535 1.9e-103 22
cds-POE84168 MRP-S27 PF10037 1.2e-15 23

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- rna-CFP56_40045 1962 653aa cds-POE84168.1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
gene-CFP56_40045

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
gene-CFP56_40045

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression